Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.23□□□□□ -1.73
CLRN1P58418 ANP32BP3-201ENST00000559213 706 ntBASIC4.23□□□□□ -1.73
CLRN1P58418 AC037471.2-201ENST00000564941 598 ntBASIC4.23□□□□□ -1.73
CLRN1P58418 MIR5699-201ENST00000578903 90 ntBASIC4.23□□□□□ -1.73
CLRN1P58418 MIR4646-201ENST00000580775 63 ntBASIC4.23□□□□□ -1.73
CLRN1P58418 AL669831.4-202ENST00000590817 238 ntBASIC4.23□□□□□ -1.73
CLRN1P58418 VN1R80P-201ENST00000597126 338 ntBASIC4.23□□□□□ -1.73
CLRN1P58418 AC090948.1-201ENST00000607464 549 ntBASIC4.23□□□□□ -1.73
CLRN1P58418 AC018445.2-201ENST00000622987 260 ntBASIC4.23□□□□□ -1.73
CLRN1P58418 AC015871.5-202ENST00000623252 701 ntBASIC4.23□□□□□ -1.73
CLRN1P58418 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.23□□□□□ -1.73
CLRN1P58418 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.23□□□□□ -1.73
CLRN1P58418 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC4.23□□□□□ -1.73
CLRN1P58418 MTND1P37-201ENST00000636562 264 ntBASIC4.23□□□□□ -1.73
CLRN1P58418 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.23□□□□□ -1.73
CLRN1P58418 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.23□□□□□ -1.73
CLRN1P58418 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.23□□□□□ -1.73
CLRN1P58418 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
CLRN1P58418 MTND4P23-201ENST00000447723 1363 ntBASIC4.23□□□□□ -1.73
CLRN1P58418 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLRN1P58418 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.23□□□□□ -1.73
CLRN1P58418 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CLRN1P58418 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CLRN1P58418 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
CLRN1P58418 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CLRN1P58418 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CLRN1P58418 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.22□□□□□ -1.73
CLRN1P58418 RN7SKP115-201ENST00000363177 317 ntBASIC4.22□□□□□ -1.73
CLRN1P58418 RNU6-263P-201ENST00000363811 107 ntBASIC4.22□□□□□ -1.73
CLRN1P58418 SNORA62.1-201ENST00000364287 154 ntBASIC4.22□□□□□ -1.73
CLRN1P58418 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CLRN1P58418 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CLRN1P58418 XGY1-201ENST00000381172 446 ntBASIC4.22□□□□□ -1.73
CLRN1P58418 RNU6-641P-201ENST00000384006 107 ntBASIC4.22□□□□□ -1.73
CLRN1P58418 SNORA32.2-201ENST00000384049 122 ntBASIC4.22□□□□□ -1.73
CLRN1P58418 SNORD37.1-201ENST00000390968 65 ntBASIC4.22□□□□□ -1.73
CLRN1P58418 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CLRN1P58418 MIR1250-201ENST00000408098 113 ntBASIC4.22□□□□□ -1.73
CLRN1P58418 RNU2-36P-201ENST00000410361 191 ntBASIC4.22□□□□□ -1.73
CLRN1P58418 AL353678.1-201ENST00000422735 741 ntBASIC4.22□□□□□ -1.73
CLRN1P58418 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC4.22□□□□□ -1.73
CLRN1P58418 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.22□□□□□ -1.73
CLRN1P58418 AC016696.1-201ENST00000446949 318 ntBASIC4.22□□□□□ -1.73
CLRN1P58418 AC010655.1-201ENST00000449336 292 ntBASIC4.22□□□□□ -1.73
CLRN1P58418 RPS29P15-201ENST00000458329 171 ntBASIC4.22□□□□□ -1.73
CLRN1P58418 NIPA2P2-201ENST00000496376 1083 ntBASIC4.22□□□□□ -1.73
CLRN1P58418 AC008638.1-201ENST00000506035 866 ntBASIC4.22□□□□□ -1.73
CLRN1P58418 AC091868.1-201ENST00000508746 304 ntBASIC4.22□□□□□ -1.73
CLRN1P58418 RN7SKP116-201ENST00000516902 319 ntBASIC4.22□□□□□ -1.73
CLRN1P58418 FAM60DP-201ENST00000524174 632 ntBASIC4.22□□□□□ -1.73
CLRN1P58418 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.22□□□□□ -1.73
CLRN1P58418 AP000676.2-201ENST00000529711 301 ntBASIC4.22□□□□□ -1.73
CLRN1P58418 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.22□□□□□ -1.73
CLRN1P58418 OR5AL2P-201ENST00000532185 920 ntBASIC4.22□□□□□ -1.73
CLRN1P58418 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.22□□□□□ -1.73
CLRN1P58418 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.22□□□□□ -1.73
CLRN1P58418 FKBP1BP1-201ENST00000553366 325 ntBASIC4.22□□□□□ -1.73
CLRN1P58418 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.22□□□□□ -1.73
CLRN1P58418 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.22□□□□□ -1.73
CLRN1P58418 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.22□□□□□ -1.73
CLRN1P58418 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.22□□□□□ -1.73
CLRN1P58418 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.22□□□□□ -1.73
CLRN1P58418 MIR3936-201ENST00000584304 110 ntBASIC4.22□□□□□ -1.73
CLRN1P58418 AC211433.2-201ENST00000608433 387 ntBASIC4.22□□□□□ -1.73
CLRN1P58418 AC135507.2-201ENST00000612443 309 ntBASIC4.22□□□□□ -1.73
CLRN1P58418 AC079684.1-201ENST00000621405 437 ntBASIC4.22□□□□□ -1.73
CLRN1P58418 AL161637.1-201ENST00000622380 412 ntBASIC4.22□□□□□ -1.73
CLRN1P58418 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.22□□□□□ -1.73
CLRN1P58418 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.22□□□□□ -1.73
CLRN1P58418 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CLRN1P58418 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CLRN1P58418 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
CLRN1P58418 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.22□□□□□ -1.73
CLRN1P58418 AL442639.1-201ENST00000625030 1899 ntBASIC4.22□□□□□ -1.73
CLRN1P58418 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.22□□□□□ -1.73
CLRN1P58418 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.22□□□□□ -1.73
CLRN1P58418 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CLRN1P58418 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
CLRN1P58418 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.73
CLRN1P58418 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.21□□□□□ -1.73
CLRN1P58418 MTCO1P9-201ENST00000505577 1534 ntBASIC4.21□□□□□ -1.73
CLRN1P58418 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
CLRN1P58418 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
CLRN1P58418 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CLRN1P58418 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CLRN1P58418 RNU6-432P-201ENST00000384196 109 ntBASIC4.21□□□□□ -1.74
CLRN1P58418 SNORA51.8-201ENST00000384234 132 ntBASIC4.21□□□□□ -1.74
CLRN1P58418 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.21□□□□□ -1.74
CLRN1P58418 AL645927.1-201ENST00000396783 406 ntBASIC4.21□□□□□ -1.74
CLRN1P58418 AL136372.1-201ENST00000403060 228 ntBASIC4.21□□□□□ -1.74
CLRN1P58418 RNU2-39P-201ENST00000410604 198 ntBASIC4.21□□□□□ -1.74
CLRN1P58418 RNU6-1148P-201ENST00000410992 104 ntBASIC4.21□□□□□ -1.74
CLRN1P58418 RNA5SP107-201ENST00000411358 122 ntBASIC4.21□□□□□ -1.74
CLRN1P58418 RPS20P15-201ENST00000412792 311 ntBASIC4.21□□□□□ -1.74
CLRN1P58418 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.21□□□□□ -1.74
CLRN1P58418 AL591848.1-201ENST00000413092 322 ntBASIC4.21□□□□□ -1.74
CLRN1P58418 DUTP6-201ENST00000425573 462 ntBASIC4.21□□□□□ -1.74
CLRN1P58418 FABP7P2-201ENST00000429946 379 ntBASIC4.21□□□□□ -1.74
CLRN1P58418 ELOCP18-201ENST00000434209 337 ntBASIC4.21□□□□□ -1.74
CLRN1P58418 PTMAP6-201ENST00000439110 327 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms