Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 RN7SKP83-201ENST00000516512 178 ntBASIC3.17□□□□□ -1.9
PAX9P55771 AP002963.1-201ENST00000530590 184 ntBASIC3.17□□□□□ -1.9
PAX9P55771 AC068831.4-201ENST00000556118 109 ntBASIC3.17□□□□□ -1.9
PAX9P55771 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.17□□□□□ -1.9
PAX9P55771 AC034268.2-201ENST00000571784 482 ntBASIC3.17□□□□□ -1.9
PAX9P55771 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.17□□□□□ -1.9
PAX9P55771 MIR5096-201ENST00000583713 70 ntBASIC3.17□□□□□ -1.9
PAX9P55771 UBE2L4-201ENST00000587688 464 ntBASIC3.17□□□□□ -1.9
PAX9P55771 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.17□□□□□ -1.9
PAX9P55771 AC146944.4-201ENST00000602697 718 ntBASIC3.17□□□□□ -1.9
PAX9P55771 AC010678.1-201ENST00000614118 713 ntBASIC3.17□□□□□ -1.9
PAX9P55771 AL158801.5-201ENST00000623123 465 ntBASIC3.17□□□□□ -1.9
PAX9P55771 AC092656.1-203ENST00000624134 423 ntBASIC3.17□□□□□ -1.9
PAX9P55771 AL603839.4-201ENST00000624658 1005 ntBASIC3.17□□□□□ -1.9
PAX9P55771 U6.98-201ENST00000637157 84 ntBASIC3.17□□□□□ -1.9
PAX9P55771 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
PAX9P55771 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.17□□□□□ -1.9
PAX9P55771 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PAX9P55771 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
PAX9P55771 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
PAX9P55771 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PAX9P55771 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.16□□□□□ -1.9
PAX9P55771 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PAX9P55771 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.16□□□□□ -1.9
PAX9P55771 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PAX9P55771 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PAX9P55771 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.16□□□□□ -1.9
PAX9P55771 SNORA60-201ENST00000362396 134 ntBASIC3.16□□□□□ -1.9
PAX9P55771 RNU1-132P-201ENST00000364300 164 ntBASIC3.16□□□□□ -1.9
PAX9P55771 Y_RNA.359-201ENST00000365498 102 ntBASIC3.16□□□□□ -1.9
PAX9P55771 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.16□□□□□ -1.9
PAX9P55771 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
PAX9P55771 RNU6-533P-201ENST00000384144 107 ntBASIC3.16□□□□□ -1.9
PAX9P55771 RPS20P2-201ENST00000402520 389 ntBASIC3.16□□□□□ -1.9
PAX9P55771 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.16□□□□□ -1.9
PAX9P55771 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.16□□□□□ -1.9
PAX9P55771 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.16□□□□□ -1.9
PAX9P55771 Z97055.1-201ENST00000419730 712 ntBASIC3.16□□□□□ -1.9
PAX9P55771 AC002075.2-201ENST00000425207 252 ntBASIC3.16□□□□□ -1.9
PAX9P55771 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.16□□□□□ -1.9
PAX9P55771 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.16□□□□□ -1.9
PAX9P55771 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.16□□□□□ -1.9
PAX9P55771 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.16□□□□□ -1.9
PAX9P55771 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.16□□□□□ -1.9
PAX9P55771 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.16□□□□□ -1.9
PAX9P55771 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
PAX9P55771 AL022238.1-201ENST00000442557 355 ntBASIC3.16□□□□□ -1.9
PAX9P55771 AL590365.1-201ENST00000450788 243 ntBASIC3.16□□□□□ -1.9
PAX9P55771 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.16□□□□□ -1.9
PAX9P55771 OR9M1P-201ENST00000459641 921 ntBASIC3.16□□□□□ -1.9
PAX9P55771 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.16□□□□□ -1.9
PAX9P55771 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.16□□□□□ -1.9
PAX9P55771 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.16□□□□□ -1.9
PAX9P55771 MTND3P5-201ENST00000512798 333 ntBASIC3.16□□□□□ -1.9
PAX9P55771 AC017037.2-201ENST00000513850 890 ntBASIC3.16□□□□□ -1.9
PAX9P55771 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.16□□□□□ -1.9
PAX9P55771 MTND4LP18-201ENST00000526864 291 ntBASIC3.16□□□□□ -1.9
PAX9P55771 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.16□□□□□ -1.9
PAX9P55771 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.16□□□□□ -1.9
PAX9P55771 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PAX9P55771 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.16□□□□□ -1.9
PAX9P55771 ZNF519P3-201ENST00000557158 1032 ntBASIC3.16□□□□□ -1.9
PAX9P55771 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.16□□□□□ -1.9
PAX9P55771 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.16□□□□□ -1.9
PAX9P55771 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.16□□□□□ -1.9
PAX9P55771 MIR4330-201ENST00000579077 105 ntBASIC3.16□□□□□ -1.9
PAX9P55771 MIR3611-201ENST00000584484 83 ntBASIC3.16□□□□□ -1.9
PAX9P55771 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.16□□□□□ -1.9
PAX9P55771 AC015871.2-201ENST00000603605 948 ntBASIC3.16□□□□□ -1.9
PAX9P55771 IGHV3-29-201ENST00000604817 344 ntBASIC3.16□□□□□ -1.9
PAX9P55771 MIR6820-201ENST00000611508 62 ntBASIC3.16□□□□□ -1.9
PAX9P55771 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.16□□□□□ -1.9
PAX9P55771 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.16□□□□□ -1.9
PAX9P55771 U7.8-201ENST00000619968 63 ntBASIC3.16□□□□□ -1.9
PAX9P55771 AP000346.3-201ENST00000622821 210 ntBASIC3.16□□□□□ -1.9
PAX9P55771 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.16□□□□□ -1.9
PAX9P55771 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
PAX9P55771 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.16□□□□□ -1.9
PAX9P55771 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
PAX9P55771 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
PAX9P55771 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.16□□□□□ -1.9
PAX9P55771 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PAX9P55771 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PAX9P55771 MTND5P33-201ENST00000571250 1450 ntBASIC3.16□□□□□ -1.9
PAX9P55771 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
PAX9P55771 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
PAX9P55771 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
PAX9P55771 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.15□□□□□ -1.91
PAX9P55771 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PAX9P55771 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PAX9P55771 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.15□□□□□ -1.91
PAX9P55771 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
PAX9P55771 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.15□□□□□ -1.91
PAX9P55771 RNU6-623P-201ENST00000363143 105 ntBASIC3.15□□□□□ -1.91
PAX9P55771 RNU6-1249P-201ENST00000363237 111 ntBASIC3.15□□□□□ -1.91
PAX9P55771 RNA5SP447-201ENST00000363749 119 ntBASIC3.15□□□□□ -1.91
PAX9P55771 RNA5SP399-201ENST00000364003 117 ntBASIC3.15□□□□□ -1.91
PAX9P55771 RNU6-359P-201ENST00000365466 108 ntBASIC3.15□□□□□ -1.91
PAX9P55771 RNU6-629P-201ENST00000384061 103 ntBASIC3.15□□□□□ -1.91
PAX9P55771 RNU6-297P-201ENST00000384636 107 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms