Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.96□□□□□ -1.78
NR1H2P55055 AL391156.1-201ENST00000554965 554 ntBASIC3.96□□□□□ -1.78
NR1H2P55055 AC007224.1-201ENST00000564410 144 ntBASIC3.96□□□□□ -1.78
NR1H2P55055 AC034268.2-201ENST00000571784 482 ntBASIC3.96□□□□□ -1.78
NR1H2P55055 MIR3160-1-201ENST00000577972 85 ntBASIC3.96□□□□□ -1.78
NR1H2P55055 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.96□□□□□ -1.78
NR1H2P55055 MIR544B-201ENST00000582372 78 ntBASIC3.96□□□□□ -1.78
NR1H2P55055 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NR1H2P55055 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.96□□□□□ -1.78
NR1H2P55055 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.96□□□□□ -1.78
NR1H2P55055 AP001330.4-201ENST00000604350 154 ntBASIC3.96□□□□□ -1.78
NR1H2P55055 AC139792.2-201ENST00000624218 587 ntBASIC3.96□□□□□ -1.78
NR1H2P55055 AL159972.1-201ENST00000625150 448 ntBASIC3.96□□□□□ -1.78
NR1H2P55055 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.96□□□□□ -1.78
NR1H2P55055 AC244258.1-201ENST00000637553 1071 ntBASIC3.96□□□□□ -1.78
NR1H2P55055 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
NR1H2P55055 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.96□□□□□ -1.78
NR1H2P55055 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
NR1H2P55055 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
NR1H2P55055 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.96□□□□□ -1.78
NR1H2P55055 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
NR1H2P55055 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.96□□□□□ -1.78
NR1H2P55055 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.95□□□□□ -1.78
NR1H2P55055 AC011460.1-201ENST00000636268 1834 ntBASIC3.95□□□□□ -1.78
NR1H2P55055 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.95□□□□□ -1.78
NR1H2P55055 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.95□□□□□ -1.78
NR1H2P55055 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NR1H2P55055 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NR1H2P55055 AC006378.2-201ENST00000623178 2476 ntBASIC3.95□□□□□ -1.78
NR1H2P55055 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.95□□□□□ -1.78
NR1H2P55055 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NR1H2P55055 RNU1-18P-201ENST00000363062 164 ntBASIC3.95□□□□□ -1.78
NR1H2P55055 U3.4-201ENST00000363352 213 ntBASIC3.95□□□□□ -1.78
NR1H2P55055 RNU5F-7P-201ENST00000363696 115 ntBASIC3.95□□□□□ -1.78
NR1H2P55055 SNORA37-201ENST00000384504 129 ntBASIC3.95□□□□□ -1.78
NR1H2P55055 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
NR1H2P55055 SNORA48.7-201ENST00000391302 135 ntBASIC3.95□□□□□ -1.78
NR1H2P55055 HMGN2P8-201ENST00000391458 268 ntBASIC3.95□□□□□ -1.78
NR1H2P55055 OR6C69P-201ENST00000394268 893 ntBASIC3.95□□□□□ -1.78
NR1H2P55055 RN7SKP263-201ENST00000411194 309 ntBASIC3.95□□□□□ -1.78
NR1H2P55055 RPL21P32-201ENST00000419877 477 ntBASIC3.95□□□□□ -1.78
NR1H2P55055 RPS27AP14-201ENST00000422868 454 ntBASIC3.95□□□□□ -1.78
NR1H2P55055 RPL7AP25-201ENST00000423357 805 ntBASIC3.95□□□□□ -1.78
NR1H2P55055 EIF1P3-201ENST00000423841 334 ntBASIC3.95□□□□□ -1.78
NR1H2P55055 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.95□□□□□ -1.78
NR1H2P55055 RPS12P10-201ENST00000427031 377 ntBASIC3.95□□□□□ -1.78
NR1H2P55055 AL365184.2-201ENST00000431139 435 ntBASIC3.95□□□□□ -1.78
NR1H2P55055 RPL35AP22-201ENST00000436855 335 ntBASIC3.95□□□□□ -1.78
NR1H2P55055 TRIM60P18-201ENST00000441518 828 ntBASIC3.95□□□□□ -1.78
NR1H2P55055 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NR1H2P55055 AP000936.2-201ENST00000447151 681 ntBASIC3.95□□□□□ -1.78
NR1H2P55055 AL359073.1-201ENST00000448036 403 ntBASIC3.95□□□□□ -1.78
NR1H2P55055 MTND1P29-201ENST00000448112 647 ntBASIC3.95□□□□□ -1.78
NR1H2P55055 HMGN2P16-201ENST00000456802 261 ntBASIC3.95□□□□□ -1.78
NR1H2P55055 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.95□□□□□ -1.78
NR1H2P55055 AC116337.2-201ENST00000477662 156 ntBASIC3.95□□□□□ -1.78
NR1H2P55055 RPL31P61-201ENST00000496160 376 ntBASIC3.95□□□□□ -1.78
NR1H2P55055 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.95□□□□□ -1.78
NR1H2P55055 AC091965.2-201ENST00000512324 613 ntBASIC3.95□□□□□ -1.78
NR1H2P55055 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.95□□□□□ -1.78
NR1H2P55055 RNU1-61P-201ENST00000516107 151 ntBASIC3.95□□□□□ -1.78
NR1H2P55055 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.95□□□□□ -1.78
NR1H2P55055 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.95□□□□□ -1.78
NR1H2P55055 AP003497.1-201ENST00000528472 562 ntBASIC3.95□□□□□ -1.78
NR1H2P55055 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.95□□□□□ -1.78
NR1H2P55055 AC013828.2-201ENST00000532487 235 ntBASIC3.95□□□□□ -1.78
NR1H2P55055 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.95□□□□□ -1.78
NR1H2P55055 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.95□□□□□ -1.78
NR1H2P55055 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.95□□□□□ -1.78
NR1H2P55055 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.95□□□□□ -1.78
NR1H2P55055 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.95□□□□□ -1.78
NR1H2P55055 AP001429.1-201ENST00000602568 530 ntBASIC3.95□□□□□ -1.78
NR1H2P55055 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.95□□□□□ -1.78
NR1H2P55055 AC012360.2-201ENST00000609349 391 ntBASIC3.95□□□□□ -1.78
NR1H2P55055 AC006065.6-201ENST00000625201 545 ntBASIC3.95□□□□□ -1.78
NR1H2P55055 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.95□□□□□ -1.78
NR1H2P55055 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.95□□□□□ -1.78
NR1H2P55055 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.95□□□□□ -1.78
NR1H2P55055 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.95□□□□□ -1.78
NR1H2P55055 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NR1H2P55055 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NR1H2P55055 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.95□□□□□ -1.78
NR1H2P55055 AC002546.1-201ENST00000588041 2504 ntBASIC3.94□□□□□ -1.78
NR1H2P55055 AC066616.2-201ENST00000559334 1481 ntBASIC3.94□□□□□ -1.78
NR1H2P55055 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
NR1H2P55055 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
NR1H2P55055 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NR1H2P55055 DEFB108F-201ENST00000344638 222 ntBASIC3.94□□□□□ -1.78
NR1H2P55055 Y_RNA.436-201ENST00000384097 102 ntBASIC3.94□□□□□ -1.78
NR1H2P55055 MIR23B-201ENST00000384832 97 ntBASIC3.94□□□□□ -1.78
NR1H2P55055 SNORA57.1-201ENST00000391227 145 ntBASIC3.94□□□□□ -1.78
NR1H2P55055 AC109780.2-201ENST00000413467 845 ntBASIC3.94□□□□□ -1.78
NR1H2P55055 RPL36AP36-201ENST00000418616 301 ntBASIC3.94□□□□□ -1.78
NR1H2P55055 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.94□□□□□ -1.78
NR1H2P55055 CYCSP46-201ENST00000423569 204 ntBASIC3.94□□□□□ -1.78
NR1H2P55055 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.94□□□□□ -1.78
NR1H2P55055 AC010153.1-201ENST00000432862 727 ntBASIC3.94□□□□□ -1.78
NR1H2P55055 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.94□□□□□ -1.78
NR1H2P55055 RAC1P7-201ENST00000445367 377 ntBASIC3.94□□□□□ -1.78
NR1H2P55055 BMI1P1-201ENST00000445879 941 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms