Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 RNU6-352P-201ENST00000516908 107 ntBASIC3.99□□□□□ -1.77
PTPN9P43378 SUMO2P20-201ENST00000520803 283 ntBASIC3.99□□□□□ -1.77
PTPN9P43378 AP002963.1-201ENST00000530590 184 ntBASIC3.99□□□□□ -1.77
PTPN9P43378 CYCSP30-201ENST00000546447 172 ntBASIC3.99□□□□□ -1.77
PTPN9P43378 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.99□□□□□ -1.77
PTPN9P43378 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.99□□□□□ -1.77
PTPN9P43378 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.99□□□□□ -1.77
PTPN9P43378 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.99□□□□□ -1.77
PTPN9P43378 RN7SL703P-201ENST00000578485 302 ntBASIC3.99□□□□□ -1.77
PTPN9P43378 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.99□□□□□ -1.77
PTPN9P43378 AL669831.4-202ENST00000590817 238 ntBASIC3.99□□□□□ -1.77
PTPN9P43378 AC103710.4-201ENST00000609301 899 ntBASIC3.99□□□□□ -1.77
PTPN9P43378 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.99□□□□□ -1.77
PTPN9P43378 AC068831.8-201ENST00000620171 435 ntBASIC3.99□□□□□ -1.77
PTPN9P43378 AC092656.1-203ENST00000624134 423 ntBASIC3.99□□□□□ -1.77
PTPN9P43378 HSPA8P1-201ENST00000425843 1833 ntBASIC3.99□□□□□ -1.77
PTPN9P43378 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.99□□□□□ -1.77
PTPN9P43378 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.99□□□□□ -1.77
PTPN9P43378 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PTPN9P43378 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PTPN9P43378 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.98□□□□□ -1.77
PTPN9P43378 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PTPN9P43378 MTND5P3-201ENST00000438536 1800 ntBASIC3.98□□□□□ -1.77
PTPN9P43378 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PTPN9P43378 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PTPN9P43378 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.98□□□□□ -1.77
PTPN9P43378 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PTPN9P43378 RNA5SP258-201ENST00000362750 119 ntBASIC3.98□□□□□ -1.77
PTPN9P43378 RNA5SP322-201ENST00000363617 119 ntBASIC3.98□□□□□ -1.77
PTPN9P43378 RNU5F-7P-201ENST00000363696 115 ntBASIC3.98□□□□□ -1.77
PTPN9P43378 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
PTPN9P43378 SNORA3.3-201ENST00000408712 125 ntBASIC3.98□□□□□ -1.77
PTPN9P43378 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.98□□□□□ -1.77
PTPN9P43378 AC006366.1-201ENST00000422002 759 ntBASIC3.98□□□□□ -1.77
PTPN9P43378 AL513174.1-201ENST00000423182 629 ntBASIC3.98□□□□□ -1.77
PTPN9P43378 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.98□□□□□ -1.77
PTPN9P43378 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.98□□□□□ -1.77
PTPN9P43378 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.98□□□□□ -1.77
PTPN9P43378 SNORD108-201ENST00000459332 71 ntBASIC3.98□□□□□ -1.77
PTPN9P43378 AP001025.2-201ENST00000490908 477 ntBASIC3.98□□□□□ -1.77
PTPN9P43378 RN7SL323P-201ENST00000494712 295 ntBASIC3.98□□□□□ -1.77
PTPN9P43378 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.98□□□□□ -1.77
PTPN9P43378 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.98□□□□□ -1.77
PTPN9P43378 RAC1P2-201ENST00000511164 579 ntBASIC3.98□□□□□ -1.77
PTPN9P43378 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.98□□□□□ -1.77
PTPN9P43378 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.98□□□□□ -1.77
PTPN9P43378 AC025881.1-201ENST00000518851 512 ntBASIC3.98□□□□□ -1.77
PTPN9P43378 OR4R3P-201ENST00000525084 838 ntBASIC3.98□□□□□ -1.77
PTPN9P43378 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.98□□□□□ -1.77
PTPN9P43378 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.98□□□□□ -1.77
PTPN9P43378 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.98□□□□□ -1.77
PTPN9P43378 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.98□□□□□ -1.77
PTPN9P43378 AC119751.7-201ENST00000600494 245 ntBASIC3.98□□□□□ -1.77
PTPN9P43378 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PTPN9P43378 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.98□□□□□ -1.77
PTPN9P43378 U73479.1-201ENST00000618062 168 ntBASIC3.98□□□□□ -1.77
PTPN9P43378 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.98□□□□□ -1.77
PTPN9P43378 AL354798.1-201ENST00000622505 329 ntBASIC3.98□□□□□ -1.77
PTPN9P43378 FP236240.3-201ENST00000623061 327 ntBASIC3.98□□□□□ -1.77
PTPN9P43378 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.98□□□□□ -1.77
PTPN9P43378 AC093591.3-201ENST00000634516 308 ntBASIC3.98□□□□□ -1.77
PTPN9P43378 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PTPN9P43378 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
PTPN9P43378 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PTPN9P43378 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.98□□□□□ -1.77
PTPN9P43378 AL049780.3-201ENST00000624612 1583 ntBASIC3.97□□□□□ -1.77
PTPN9P43378 DCAF13P1-201ENST00000495256 1330 ntBASIC3.97□□□□□ -1.77
PTPN9P43378 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.97□□□□□ -1.77
PTPN9P43378 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
PTPN9P43378 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PTPN9P43378 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
PTPN9P43378 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PTPN9P43378 RN7SKP263-201ENST00000411194 309 ntBASIC3.97□□□□□ -1.77
PTPN9P43378 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.97□□□□□ -1.77
PTPN9P43378 RPL21P32-201ENST00000419877 477 ntBASIC3.97□□□□□ -1.77
PTPN9P43378 MTCO2P34-201ENST00000421994 607 ntBASIC3.97□□□□□ -1.77
PTPN9P43378 AL445669.1-201ENST00000426743 755 ntBASIC3.97□□□□□ -1.77
PTPN9P43378 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.97□□□□□ -1.77
PTPN9P43378 CKS1BP5-201ENST00000434172 273 ntBASIC3.97□□□□□ -1.77
PTPN9P43378 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PTPN9P43378 MTND1P28-201ENST00000435623 950 ntBASIC3.97□□□□□ -1.77
PTPN9P43378 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.97□□□□□ -1.77
PTPN9P43378 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.97□□□□□ -1.77
PTPN9P43378 SNORA71B-202ENST00000439232 272 ntBASIC3.97□□□□□ -1.77
PTPN9P43378 MTCO1P19-201ENST00000443487 500 ntBASIC3.97□□□□□ -1.77
PTPN9P43378 SSXP1-201ENST00000453640 473 ntBASIC3.97□□□□□ -1.77
PTPN9P43378 TRBV12-2-201ENST00000489763 344 ntBASIC3.97□□□□□ -1.77
PTPN9P43378 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
PTPN9P43378 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PTPN9P43378 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.97□□□□□ -1.77
PTPN9P43378 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.97□□□□□ -1.77
PTPN9P43378 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PTPN9P43378 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.97□□□□□ -1.77
PTPN9P43378 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.97□□□□□ -1.77
PTPN9P43378 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PTPN9P43378 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.97□□□□□ -1.77
PTPN9P43378 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.97□□□□□ -1.77
PTPN9P43378 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.97□□□□□ -1.77
PTPN9P43378 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.97□□□□□ -1.77
PTPN9P43378 AC068790.2-201ENST00000602601 557 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms