Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC114981.1-201ENST00000503897 678 ntBASIC4.55□□□□□ -1.68
COL15A1P39059 AC004069.2-201ENST00000505438 1114 ntBASIC4.55□□□□□ -1.68
COL15A1P39059 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.55□□□□□ -1.68
COL15A1P39059 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.55□□□□□ -1.68
COL15A1P39059 AC008489.1-201ENST00000524271 483 ntBASIC4.55□□□□□ -1.68
COL15A1P39059 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
COL15A1P39059 AC011611.1-201ENST00000552179 197 ntBASIC4.55□□□□□ -1.68
COL15A1P39059 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.55□□□□□ -1.68
COL15A1P39059 MIR3611-201ENST00000584484 83 ntBASIC4.55□□□□□ -1.68
COL15A1P39059 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
COL15A1P39059 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.55□□□□□ -1.68
COL15A1P39059 YPEL5P2-201ENST00000605553 359 ntBASIC4.55□□□□□ -1.68
COL15A1P39059 LINC00901.1-201ENST00000617252 152 ntBASIC4.55□□□□□ -1.68
COL15A1P39059 MIR6864-201ENST00000617935 70 ntBASIC4.55□□□□□ -1.68
COL15A1P39059 AL732618.1-201ENST00000623251 301 ntBASIC4.55□□□□□ -1.68
COL15A1P39059 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.55□□□□□ -1.68
COL15A1P39059 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
COL15A1P39059 MFSD8-233ENST00000641482 4860 ntBASIC4.55□□□□□ -1.68
COL15A1P39059 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
COL15A1P39059 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
COL15A1P39059 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.55□□□□□ -1.68
COL15A1P39059 AL356489.2-201ENST00000566968 3528 ntBASIC4.54□□□□□ -1.68
COL15A1P39059 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
COL15A1P39059 RNU6-1279P-201ENST00000383917 103 ntBASIC4.54□□□□□ -1.68
COL15A1P39059 AC069218.2-201ENST00000411665 344 ntBASIC4.54□□□□□ -1.68
COL15A1P39059 MTCO3P41-201ENST00000414801 328 ntBASIC4.54□□□□□ -1.68
COL15A1P39059 MTCO2P34-201ENST00000421994 607 ntBASIC4.54□□□□□ -1.68
COL15A1P39059 AL512649.1-201ENST00000428997 581 ntBASIC4.54□□□□□ -1.68
COL15A1P39059 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.54□□□□□ -1.68
COL15A1P39059 AL512286.1-201ENST00000439244 400 ntBASIC4.54□□□□□ -1.68
COL15A1P39059 MTCO1P19-201ENST00000443487 500 ntBASIC4.54□□□□□ -1.68
COL15A1P39059 BTF3P5-201ENST00000457252 467 ntBASIC4.54□□□□□ -1.68
COL15A1P39059 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.54□□□□□ -1.68
COL15A1P39059 LAMTOR3P2-201ENST00000504479 232 ntBASIC4.54□□□□□ -1.68
COL15A1P39059 RPL23AP94-201ENST00000512518 302 ntBASIC4.54□□□□□ -1.68
COL15A1P39059 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.54□□□□□ -1.68
COL15A1P39059 AC087276.1-201ENST00000529659 480 ntBASIC4.54□□□□□ -1.68
COL15A1P39059 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.54□□□□□ -1.68
COL15A1P39059 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.54□□□□□ -1.68
COL15A1P39059 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.54□□□□□ -1.68
COL15A1P39059 MIR4637-201ENST00000582405 84 ntBASIC4.54□□□□□ -1.68
COL15A1P39059 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.54□□□□□ -1.68
COL15A1P39059 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.54□□□□□ -1.68
COL15A1P39059 AL513477.2-201ENST00000607858 568 ntBASIC4.54□□□□□ -1.68
COL15A1P39059 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.54□□□□□ -1.68
COL15A1P39059 U4.6-201ENST00000621618 127 ntBASIC4.54□□□□□ -1.68
COL15A1P39059 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
COL15A1P39059 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.54□□□□□ -1.68
COL15A1P39059 MTND5P28-201ENST00000438005 1594 ntBASIC4.54□□□□□ -1.68
COL15A1P39059 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
COL15A1P39059 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
COL15A1P39059 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
COL15A1P39059 PABPC1P9-201ENST00000426076 1612 ntBASIC4.54□□□□□ -1.68
COL15A1P39059 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.54□□□□□ -1.68
COL15A1P39059 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
COL15A1P39059 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.54□□□□□ -1.68
COL15A1P39059 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
COL15A1P39059 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
COL15A1P39059 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
COL15A1P39059 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
COL15A1P39059 OR5H15-201ENST00000383696 930 ntBASIC4.53□□□□□ -1.68
COL15A1P39059 RNY3P10-201ENST00000384764 102 ntBASIC4.53□□□□□ -1.68
COL15A1P39059 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
COL15A1P39059 AL121972.1-201ENST00000402023 252 ntBASIC4.53□□□□□ -1.68
COL15A1P39059 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
COL15A1P39059 HMGB1P11-201ENST00000413899 637 ntBASIC4.53□□□□□ -1.68
COL15A1P39059 CYCSP46-201ENST00000423569 204 ntBASIC4.53□□□□□ -1.68
COL15A1P39059 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.53□□□□□ -1.68
COL15A1P39059 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
COL15A1P39059 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC4.53□□□□□ -1.68
COL15A1P39059 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.53□□□□□ -1.68
COL15A1P39059 TRIM60P18-201ENST00000441518 828 ntBASIC4.53□□□□□ -1.68
COL15A1P39059 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC4.53□□□□□ -1.68
COL15A1P39059 EEF1E1P1-201ENST00000446998 430 ntBASIC4.53□□□□□ -1.68
COL15A1P39059 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.53□□□□□ -1.68
COL15A1P39059 snoU13.7-201ENST00000459220 104 ntBASIC4.53□□□□□ -1.68
COL15A1P39059 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.53□□□□□ -1.68
COL15A1P39059 AC093663.1-201ENST00000497190 394 ntBASIC4.53□□□□□ -1.68
COL15A1P39059 AC110792.2-201ENST00000510278 224 ntBASIC4.53□□□□□ -1.68
COL15A1P39059 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.53□□□□□ -1.68
COL15A1P39059 RNU1-103P-201ENST00000516502 125 ntBASIC4.53□□□□□ -1.68
COL15A1P39059 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
COL15A1P39059 MTCYBP20-201ENST00000524239 1129 ntBASIC4.53□□□□□ -1.68
COL15A1P39059 AC024224.1-201ENST00000538284 609 ntBASIC4.53□□□□□ -1.68
COL15A1P39059 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC4.53□□□□□ -1.68
COL15A1P39059 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.53□□□□□ -1.68
COL15A1P39059 AP001004.1-201ENST00000582468 324 ntBASIC4.53□□□□□ -1.68
COL15A1P39059 AC068276.1-201ENST00000605793 379 ntBASIC4.53□□□□□ -1.68
COL15A1P39059 AC239868.4-201ENST00000608318 671 ntBASIC4.53□□□□□ -1.68
COL15A1P39059 AC013562.2-201ENST00000611632 603 ntBASIC4.53□□□□□ -1.68
COL15A1P39059 MIR486-1-201ENST00000612171 68 ntBASIC4.53□□□□□ -1.68
COL15A1P39059 AC078899.5-201ENST00000612475 178 ntBASIC4.53□□□□□ -1.68
COL15A1P39059 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.53□□□□□ -1.68
COL15A1P39059 MIR7112-201ENST00000616126 65 ntBASIC4.53□□□□□ -1.68
COL15A1P39059 AC026585.1-201ENST00000619582 524 ntBASIC4.53□□□□□ -1.68
COL15A1P39059 AC103858.2-201ENST00000621471 543 ntBASIC4.53□□□□□ -1.68
COL15A1P39059 AC025048.6-202ENST00000627667 438 ntBASIC4.53□□□□□ -1.68
COL15A1P39059 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
COL15A1P39059 AL031985.3-201ENST00000565390 2449 ntBASIC4.53□□□□□ -1.68
COL15A1P39059 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms