Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 MIR4675-201ENST00000577898 77 ntBASIC5.6□□□□□ -1.51
GPC1P35052 BX284668.6-201ENST00000606899 438 ntBASIC5.6□□□□□ -1.51
GPC1P35052 AL591516.1-201ENST00000611326 274 ntBASIC5.6□□□□□ -1.51
GPC1P35052 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.6□□□□□ -1.51
GPC1P35052 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.6□□□□□ -1.51
GPC1P35052 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
GPC1P35052 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
GPC1P35052 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
GPC1P35052 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
GPC1P35052 AL359854.1-201ENST00000614203 1594 ntBASIC5.59□□□□□ -1.51
GPC1P35052 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
GPC1P35052 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.59□□□□□ -1.51
GPC1P35052 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
GPC1P35052 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
GPC1P35052 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.59□□□□□ -1.51
GPC1P35052 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
GPC1P35052 AC005224.3-201ENST00000584683 2140 ntBASIC5.59□□□□□ -1.51
GPC1P35052 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.59□□□□□ -1.51
GPC1P35052 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
GPC1P35052 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.59□□□□□ -1.51
GPC1P35052 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.59□□□□□ -1.51
GPC1P35052 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.59□□□□□ -1.51
GPC1P35052 RNU6-708P-201ENST00000384217 107 ntBASIC5.59□□□□□ -1.51
GPC1P35052 GCNT1P4-201ENST00000404096 329 ntBASIC5.59□□□□□ -1.51
GPC1P35052 AC113412.1-201ENST00000425840 504 ntBASIC5.59□□□□□ -1.51
GPC1P35052 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.59□□□□□ -1.51
GPC1P35052 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.59□□□□□ -1.51
GPC1P35052 AC008264.1-201ENST00000447612 367 ntBASIC5.59□□□□□ -1.51
GPC1P35052 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC5.59□□□□□ -1.51
GPC1P35052 RPL7P49-201ENST00000471402 708 ntBASIC5.59□□□□□ -1.51
GPC1P35052 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.59□□□□□ -1.51
GPC1P35052 NDUFB5P1-201ENST00000508134 564 ntBASIC5.59□□□□□ -1.51
GPC1P35052 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.59□□□□□ -1.51
GPC1P35052 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.59□□□□□ -1.51
GPC1P35052 SNORA25.14-201ENST00000516481 132 ntBASIC5.59□□□□□ -1.51
GPC1P35052 AP006587.4-201ENST00000526053 529 ntBASIC5.59□□□□□ -1.51
GPC1P35052 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
GPC1P35052 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC5.59□□□□□ -1.51
GPC1P35052 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC5.59□□□□□ -1.51
GPC1P35052 OR1E3-201ENST00000575608 948 ntBASIC5.59□□□□□ -1.51
GPC1P35052 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.59□□□□□ -1.51
GPC1P35052 MIR4502-201ENST00000580432 81 ntBASIC5.59□□□□□ -1.51
GPC1P35052 OR1M4P-201ENST00000589199 287 ntBASIC5.59□□□□□ -1.51
GPC1P35052 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.59□□□□□ -1.51
GPC1P35052 RNF138P2-201ENST00000603490 592 ntBASIC5.59□□□□□ -1.51
GPC1P35052 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
GPC1P35052 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.59□□□□□ -1.51
GPC1P35052 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
GPC1P35052 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.59□□□□□ -1.51
GPC1P35052 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.59□□□□□ -1.51
GPC1P35052 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
GPC1P35052 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
GPC1P35052 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
GPC1P35052 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.52
GPC1P35052 AC012254.3-201ENST00000591183 2117 ntBASIC5.59□□□□□ -1.52
GPC1P35052 AC116667.1-201ENST00000604855 2072 ntBASIC5.59□□□□□ -1.52
GPC1P35052 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
GPC1P35052 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
GPC1P35052 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.58□□□□□ -1.52
GPC1P35052 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
GPC1P35052 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
GPC1P35052 Y_RNA.83-201ENST00000363005 113 ntBASIC5.58□□□□□ -1.52
GPC1P35052 RNU6-288P-201ENST00000363690 104 ntBASIC5.58□□□□□ -1.52
GPC1P35052 RN7SKP128-201ENST00000364270 303 ntBASIC5.58□□□□□ -1.52
GPC1P35052 SNORD113-1-201ENST00000365321 69 ntBASIC5.58□□□□□ -1.52
GPC1P35052 RNU6-933P-201ENST00000384424 107 ntBASIC5.58□□□□□ -1.52
GPC1P35052 SNORA69.1-201ENST00000390904 137 ntBASIC5.58□□□□□ -1.52
GPC1P35052 AL590704.1-201ENST00000402856 794 ntBASIC5.58□□□□□ -1.52
GPC1P35052 AL139156.1-201ENST00000412785 841 ntBASIC5.58□□□□□ -1.52
GPC1P35052 RPL21P90-201ENST00000415692 466 ntBASIC5.58□□□□□ -1.52
GPC1P35052 RPS15AP6-201ENST00000420703 385 ntBASIC5.58□□□□□ -1.52
GPC1P35052 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.58□□□□□ -1.52
GPC1P35052 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.58□□□□□ -1.52
GPC1P35052 AC009963.3-201ENST00000458090 486 ntBASIC5.58□□□□□ -1.52
GPC1P35052 RNU1-88P-201ENST00000459274 128 ntBASIC5.58□□□□□ -1.52
GPC1P35052 AC092865.4-201ENST00000477936 615 ntBASIC5.58□□□□□ -1.52
GPC1P35052 RPL31P60-201ENST00000478450 367 ntBASIC5.58□□□□□ -1.52
GPC1P35052 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.58□□□□□ -1.52
GPC1P35052 RN7SL284P-201ENST00000498823 275 ntBASIC5.58□□□□□ -1.52
GPC1P35052 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
GPC1P35052 SNORA31.6-201ENST00000516241 130 ntBASIC5.58□□□□□ -1.52
GPC1P35052 RN7SKP60-201ENST00000516985 239 ntBASIC5.58□□□□□ -1.52
GPC1P35052 RNU6-1212P-201ENST00000517023 104 ntBASIC5.58□□□□□ -1.52
GPC1P35052 RN7SKP183-201ENST00000517169 324 ntBASIC5.58□□□□□ -1.52
GPC1P35052 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.58□□□□□ -1.52
GPC1P35052 AC090151.1-201ENST00000520784 730 ntBASIC5.58□□□□□ -1.52
GPC1P35052 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.58□□□□□ -1.52
GPC1P35052 AC087441.2-201ENST00000529141 262 ntBASIC5.58□□□□□ -1.52
GPC1P35052 CR383656.7-201ENST00000548164 174 ntBASIC5.58□□□□□ -1.52
GPC1P35052 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.58□□□□□ -1.52
GPC1P35052 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.58□□□□□ -1.52
GPC1P35052 OR1F2P-201ENST00000570470 933 ntBASIC5.58□□□□□ -1.52
GPC1P35052 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC5.58□□□□□ -1.52
GPC1P35052 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC5.58□□□□□ -1.52
GPC1P35052 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
GPC1P35052 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC5.58□□□□□ -1.52
GPC1P35052 AC174048.1-201ENST00000603389 144 ntBASIC5.58□□□□□ -1.52
GPC1P35052 MIR3976-201ENST00000606807 139 ntBASIC5.58□□□□□ -1.52
GPC1P35052 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC5.58□□□□□ -1.52
GPC1P35052 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms