Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 HMGB3P21-201ENST00000452483 547 ntBASIC2.46□□□□□ -2.02
COL4A5P29400 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC2.46□□□□□ -2.02
COL4A5P29400 RPL31P53-201ENST00000457065 348 ntBASIC2.46□□□□□ -2.02
COL4A5P29400 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC2.46□□□□□ -2.02
COL4A5P29400 AC026412.2-201ENST00000512270 1075 ntBASIC2.46□□□□□ -2.02
COL4A5P29400 RNA5SP480-201ENST00000516840 109 ntBASIC2.46□□□□□ -2.02
COL4A5P29400 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.46□□□□□ -2.02
COL4A5P29400 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.46□□□□□ -2.02
COL4A5P29400 MIR5002-201ENST00000584713 97 ntBASIC2.46□□□□□ -2.02
COL4A5P29400 AC128687.1-201ENST00000605304 619 ntBASIC2.46□□□□□ -2.02
COL4A5P29400 AL355816.1-201ENST00000607951 118 ntBASIC2.46□□□□□ -2.02
COL4A5P29400 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.46□□□□□ -2.02
COL4A5P29400 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.46□□□□□ -2.02
COL4A5P29400 MFSD8-245ENST00000641743 948 ntBASIC2.46□□□□□ -2.02
COL4A5P29400 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.46□□□□□ -2.02
COL4A5P29400 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.46□□□□□ -2.02
COL4A5P29400 AC066616.2-201ENST00000559334 1481 ntBASIC2.45□□□□□ -2.02
COL4A5P29400 AC091152.2-201ENST00000591628 2569 ntBASIC2.45□□□□□ -2.02
COL4A5P29400 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.45□□□□□ -2.02
COL4A5P29400 RNY1P10-201ENST00000363268 113 ntBASIC2.45□□□□□ -2.02
COL4A5P29400 RNU6-532P-201ENST00000384318 107 ntBASIC2.45□□□□□ -2.02
COL4A5P29400 MIR9-3-201ENST00000385084 90 ntBASIC2.45□□□□□ -2.02
COL4A5P29400 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.45□□□□□ -2.02
COL4A5P29400 OR4K11P-201ENST00000431829 904 ntBASIC2.45□□□□□ -2.02
COL4A5P29400 NDUFB4P6-201ENST00000436819 366 ntBASIC2.45□□□□□ -2.02
COL4A5P29400 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC2.45□□□□□ -2.02
COL4A5P29400 AC055855.1-201ENST00000489563 579 ntBASIC2.45□□□□□ -2.02
COL4A5P29400 AC012170.1-201ENST00000495139 359 ntBASIC2.45□□□□□ -2.02
COL4A5P29400 AC092045.1-201ENST00000495716 1231 ntBASIC2.45□□□□□ -2.02
COL4A5P29400 RPL23AP63-201ENST00000498752 471 ntBASIC2.45□□□□□ -2.02
COL4A5P29400 RNU6-347P-201ENST00000516658 105 ntBASIC2.45□□□□□ -2.02
COL4A5P29400 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC2.45□□□□□ -2.02
COL4A5P29400 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC2.45□□□□□ -2.02
COL4A5P29400 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.45□□□□□ -2.02
COL4A5P29400 AL389895.1-201ENST00000554127 252 ntBASIC2.45□□□□□ -2.02
COL4A5P29400 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC2.45□□□□□ -2.02
COL4A5P29400 AC006254.3-201ENST00000603353 884 ntBASIC2.45□□□□□ -2.02
COL4A5P29400 RPP40P2-201ENST00000603596 712 ntBASIC2.45□□□□□ -2.02
COL4A5P29400 AC107294.3-201ENST00000609211 526 ntBASIC2.45□□□□□ -2.02
COL4A5P29400 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
COL4A5P29400 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.45□□□□□ -2.02
COL4A5P29400 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
COL4A5P29400 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
COL4A5P29400 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
COL4A5P29400 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC2.45□□□□□ -2.02
COL4A5P29400 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
COL4A5P29400 AP005901.5-201ENST00000545779 1796 ntBASIC2.44□□□□□ -2.02
COL4A5P29400 RNU6-661P-201ENST00000362409 107 ntBASIC2.44□□□□□ -2.02
COL4A5P29400 RNU6-1251P-201ENST00000364502 107 ntBASIC2.44□□□□□ -2.02
COL4A5P29400 MIR124-3-201ENST00000384866 87 ntBASIC2.44□□□□□ -2.02
COL4A5P29400 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC2.44□□□□□ -2.02
COL4A5P29400 AL358453.1-201ENST00000422522 250 ntBASIC2.44□□□□□ -2.02
COL4A5P29400 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.44□□□□□ -2.02
COL4A5P29400 AC093716.1-201ENST00000435923 377 ntBASIC2.44□□□□□ -2.02
COL4A5P29400 USP9YP8-201ENST00000441913 500 ntBASIC2.44□□□□□ -2.02
COL4A5P29400 RPS29P11-201ENST00000496507 171 ntBASIC2.44□□□□□ -2.02
COL4A5P29400 KATNBL1P4-201ENST00000503545 918 ntBASIC2.44□□□□□ -2.02
COL4A5P29400 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC2.44□□□□□ -2.02
COL4A5P29400 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC2.44□□□□□ -2.02
COL4A5P29400 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.44□□□□□ -2.02
COL4A5P29400 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC2.44□□□□□ -2.02
COL4A5P29400 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.44□□□□□ -2.02
COL4A5P29400 AC092650.2-201ENST00000619984 902 ntBASIC2.44□□□□□ -2.02
COL4A5P29400 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
COL4A5P29400 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
COL4A5P29400 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
COL4A5P29400 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
COL4A5P29400 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
COL4A5P29400 SNORA62.2-201ENST00000364672 152 ntBASIC2.44□□□□□ -2.02
COL4A5P29400 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.44□□□□□ -2.02
COL4A5P29400 AIMP1P1-201ENST00000418670 937 ntBASIC2.44□□□□□ -2.02
COL4A5P29400 SDCBPP3-201ENST00000419629 891 ntBASIC2.44□□□□□ -2.02
COL4A5P29400 MTCYBP12-201ENST00000440559 1134 ntBASIC2.44□□□□□ -2.02
COL4A5P29400 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.44□□□□□ -2.02
COL4A5P29400 MTCO1P42-201ENST00000457379 726 ntBASIC2.44□□□□□ -2.02
COL4A5P29400 RNU7-27P-201ENST00000459281 62 ntBASIC2.44□□□□□ -2.02
COL4A5P29400 AC068781.1-201ENST00000488231 618 ntBASIC2.44□□□□□ -2.02
COL4A5P29400 AC023050.1-201ENST00000498198 304 ntBASIC2.44□□□□□ -2.02
COL4A5P29400 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.44□□□□□ -2.02
COL4A5P29400 VN1R84P-201ENST00000593697 235 ntBASIC2.44□□□□□ -2.02
COL4A5P29400 AL391813.2-201ENST00000609113 322 ntBASIC2.44□□□□□ -2.02
COL4A5P29400 AC091834.1-201ENST00000614543 472 ntBASIC2.44□□□□□ -2.02
COL4A5P29400 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.44□□□□□ -2.02
COL4A5P29400 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
COL4A5P29400 AL118496.1-201ENST00000440201 1812 ntBASIC2.43□□□□□ -2.02
COL4A5P29400 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
COL4A5P29400 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
COL4A5P29400 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
COL4A5P29400 MIR337-201ENST00000362281 93 ntBASIC2.43□□□□□ -2.02
COL4A5P29400 RNA5SP270-201ENST00000411361 118 ntBASIC2.43□□□□□ -2.02
COL4A5P29400 AC008173.1-201ENST00000418901 264 ntBASIC2.43□□□□□ -2.02
COL4A5P29400 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.43□□□□□ -2.02
COL4A5P29400 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.43□□□□□ -2.02
COL4A5P29400 RN7SKP96-201ENST00000516948 297 ntBASIC2.43□□□□□ -2.02
COL4A5P29400 AC025260.1-201ENST00000548858 430 ntBASIC2.43□□□□□ -2.02
COL4A5P29400 AC084757.1-201ENST00000559987 490 ntBASIC2.43□□□□□ -2.02
COL4A5P29400 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.43□□□□□ -2.02
COL4A5P29400 AL670379.6-201ENST00000603753 252 ntBASIC2.43□□□□□ -2.02
COL4A5P29400 AL670379.11-201ENST00000604059 253 ntBASIC2.43□□□□□ -2.02
COL4A5P29400 AL670379.10-201ENST00000604330 253 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms