Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AC106028.5-201ENST00000610332 395 ntBASIC3.25□□□□□ -1.89
SHC1P29353 RNU6-156P-201ENST00000621869 107 ntBASIC3.25□□□□□ -1.89
SHC1P29353 C2orf27A-204ENST00000623058 969 ntBASIC3.25□□□□□ -1.89
SHC1P29353 FAM157B-203ENST00000639350 358 ntBASIC3.25□□□□□ -1.89
SHC1P29353 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SHC1P29353 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
SHC1P29353 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
SHC1P29353 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.25□□□□□ -1.89
SHC1P29353 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.25□□□□□ -1.89
SHC1P29353 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SHC1P29353 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SHC1P29353 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.24□□□□□ -1.89
SHC1P29353 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.24□□□□□ -1.89
SHC1P29353 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.24□□□□□ -1.89
SHC1P29353 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
SHC1P29353 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SHC1P29353 AL021368.2-201ENST00000606125 5352 ntBASIC3.24□□□□□ -1.89
SHC1P29353 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SHC1P29353 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SHC1P29353 Y_RNA.18-201ENST00000362461 102 ntBASIC3.24□□□□□ -1.89
SHC1P29353 RNU6-374P-201ENST00000364146 108 ntBASIC3.24□□□□□ -1.89
SHC1P29353 RNA5SP42-201ENST00000364278 115 ntBASIC3.24□□□□□ -1.89
SHC1P29353 RNU6-660P-201ENST00000364566 109 ntBASIC3.24□□□□□ -1.89
SHC1P29353 SNORD6-201ENST00000365444 73 ntBASIC3.24□□□□□ -1.89
SHC1P29353 PTMAP2-201ENST00000397627 327 ntBASIC3.24□□□□□ -1.89
SHC1P29353 DEFB108C-201ENST00000400154 252 ntBASIC3.24□□□□□ -1.89
SHC1P29353 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.24□□□□□ -1.89
SHC1P29353 RN7SKP142-201ENST00000411236 328 ntBASIC3.24□□□□□ -1.89
SHC1P29353 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.24□□□□□ -1.89
SHC1P29353 AC092634.6-201ENST00000418558 192 ntBASIC3.24□□□□□ -1.89
SHC1P29353 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.24□□□□□ -1.89
SHC1P29353 CYCSP46-201ENST00000423569 204 ntBASIC3.24□□□□□ -1.89
SHC1P29353 SDCBPP2-201ENST00000424643 885 ntBASIC3.24□□□□□ -1.89
SHC1P29353 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SHC1P29353 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.24□□□□□ -1.89
SHC1P29353 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.24□□□□□ -1.89
SHC1P29353 LARP1BP3-201ENST00000437229 869 ntBASIC3.24□□□□□ -1.89
SHC1P29353 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.24□□□□□ -1.89
SHC1P29353 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.24□□□□□ -1.89
SHC1P29353 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.24□□□□□ -1.89
SHC1P29353 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SHC1P29353 ARPC3P2-201ENST00000457786 533 ntBASIC3.24□□□□□ -1.89
SHC1P29353 AP000873.1-201ENST00000463987 400 ntBASIC3.24□□□□□ -1.89
SHC1P29353 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.24□□□□□ -1.89
SHC1P29353 AP000893.1-201ENST00000474462 794 ntBASIC3.24□□□□□ -1.89
SHC1P29353 AC087385.1-201ENST00000475062 312 ntBASIC3.24□□□□□ -1.89
SHC1P29353 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.24□□□□□ -1.89
SHC1P29353 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.24□□□□□ -1.89
SHC1P29353 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.24□□□□□ -1.89
SHC1P29353 AC026403.1-201ENST00000518938 295 ntBASIC3.24□□□□□ -1.89
SHC1P29353 AP002963.1-201ENST00000530590 184 ntBASIC3.24□□□□□ -1.89
SHC1P29353 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SHC1P29353 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.24□□□□□ -1.89
SHC1P29353 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.24□□□□□ -1.89
SHC1P29353 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.24□□□□□ -1.89
SHC1P29353 AL512347.1-201ENST00000566420 503 ntBASIC3.24□□□□□ -1.89
SHC1P29353 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SHC1P29353 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.24□□□□□ -1.89
SHC1P29353 AC008507.1-201ENST00000587506 734 ntBASIC3.24□□□□□ -1.89
SHC1P29353 AC245389.1-201ENST00000605141 529 ntBASIC3.24□□□□□ -1.89
SHC1P29353 AC069304.2-201ENST00000605154 435 ntBASIC3.24□□□□□ -1.89
SHC1P29353 AC128687.1-201ENST00000605304 619 ntBASIC3.24□□□□□ -1.89
SHC1P29353 AL021997.1-201ENST00000605757 193 ntBASIC3.24□□□□□ -1.89
SHC1P29353 AL139286.2-201ENST00000606838 396 ntBASIC3.24□□□□□ -1.89
SHC1P29353 AC099842.1-201ENST00000619919 596 ntBASIC3.24□□□□□ -1.89
SHC1P29353 AL732618.1-201ENST00000623251 301 ntBASIC3.24□□□□□ -1.89
SHC1P29353 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.24□□□□□ -1.89
SHC1P29353 AC120349.2-201ENST00000625002 298 ntBASIC3.24□□□□□ -1.89
SHC1P29353 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.24□□□□□ -1.89
SHC1P29353 AC127502.3-201ENST00000636170 1206 ntBASIC3.24□□□□□ -1.89
SHC1P29353 AL732372.2-225ENST00000642124 456 ntBASIC3.24□□□□□ -1.89
SHC1P29353 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SHC1P29353 PWAR6-201ENST00000552334 4618 ntBASIC3.24□□□□□ -1.89
SHC1P29353 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
SHC1P29353 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
SHC1P29353 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.24□□□□□ -1.89
SHC1P29353 AC011978.2-201ENST00000569835 2054 ntBASIC3.23□□□□□ -1.89
SHC1P29353 AC090337.1-201ENST00000579651 2074 ntBASIC3.23□□□□□ -1.89
SHC1P29353 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.23□□□□□ -1.89
SHC1P29353 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SHC1P29353 RNU1-85P-201ENST00000364127 164 ntBASIC3.23□□□□□ -1.89
SHC1P29353 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
SHC1P29353 RPL23AP29-201ENST00000397284 453 ntBASIC3.23□□□□□ -1.89
SHC1P29353 PRRC2CP1-201ENST00000404428 159 ntBASIC3.23□□□□□ -1.89
SHC1P29353 MTHFD2P2-201ENST00000407725 247 ntBASIC3.23□□□□□ -1.89
SHC1P29353 USP9YP33-201ENST00000412220 421 ntBASIC3.23□□□□□ -1.89
SHC1P29353 RPS15AP38-201ENST00000413110 372 ntBASIC3.23□□□□□ -1.89
SHC1P29353 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SHC1P29353 AC017079.2-201ENST00000416102 485 ntBASIC3.23□□□□□ -1.89
SHC1P29353 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.23□□□□□ -1.89
SHC1P29353 RPS15AP40-201ENST00000419621 391 ntBASIC3.23□□□□□ -1.89
SHC1P29353 RPS3AP44-201ENST00000425466 790 ntBASIC3.23□□□□□ -1.89
SHC1P29353 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.23□□□□□ -1.89
SHC1P29353 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.23□□□□□ -1.89
SHC1P29353 USP9YP35-201ENST00000435696 412 ntBASIC3.23□□□□□ -1.89
SHC1P29353 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.23□□□□□ -1.89
SHC1P29353 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.23□□□□□ -1.89
SHC1P29353 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.23□□□□□ -1.89
SHC1P29353 USP9YP29-201ENST00000445112 563 ntBASIC3.23□□□□□ -1.89
SHC1P29353 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms