Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 HSFY3P-201ENST00000444242 1191 ntBASIC2.5□□□□□ -2.01
HLA-DMAP28067 MRPL50P4-201ENST00000446432 475 ntBASIC2.5□□□□□ -2.01
HLA-DMAP28067 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.5□□□□□ -2.01
HLA-DMAP28067 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.5□□□□□ -2.01
HLA-DMAP28067 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.5□□□□□ -2.01
HLA-DMAP28067 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.5□□□□□ -2.01
HLA-DMAP28067 GTF2IP12-201ENST00000456547 356 ntBASIC2.5□□□□□ -2.01
HLA-DMAP28067 RNU7-140P-201ENST00000459546 60 ntBASIC2.5□□□□□ -2.01
HLA-DMAP28067 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.5□□□□□ -2.01
HLA-DMAP28067 AIG1P1-201ENST00000503376 148 ntBASIC2.5□□□□□ -2.01
HLA-DMAP28067 PRELID3BP6-201ENST00000503839 571 ntBASIC2.5□□□□□ -2.01
HLA-DMAP28067 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.5□□□□□ -2.01
HLA-DMAP28067 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.5□□□□□ -2.01
HLA-DMAP28067 RPPH1-2P-201ENST00000516688 293 ntBASIC2.5□□□□□ -2.01
HLA-DMAP28067 PAICSP4-201ENST00000517543 1253 ntBASIC2.5□□□□□ -2.01
HLA-DMAP28067 MTCO1P47-201ENST00000523889 1271 ntBASIC2.5□□□□□ -2.01
HLA-DMAP28067 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC2.5□□□□□ -2.01
HLA-DMAP28067 AP003049.1-201ENST00000529418 457 ntBASIC2.5□□□□□ -2.01
HLA-DMAP28067 AP000867.2-201ENST00000532468 320 ntBASIC2.5□□□□□ -2.01
HLA-DMAP28067 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.5□□□□□ -2.01
HLA-DMAP28067 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC2.5□□□□□ -2.01
HLA-DMAP28067 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC2.5□□□□□ -2.01
HLA-DMAP28067 AC011611.1-201ENST00000552179 197 ntBASIC2.5□□□□□ -2.01
HLA-DMAP28067 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.5□□□□□ -2.01
HLA-DMAP28067 NIFKP8-201ENST00000560500 874 ntBASIC2.5□□□□□ -2.01
HLA-DMAP28067 AC138761.3-201ENST00000579993 334 ntBASIC2.5□□□□□ -2.01
HLA-DMAP28067 UBL5P2-201ENST00000583788 219 ntBASIC2.5□□□□□ -2.01
HLA-DMAP28067 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC2.5□□□□□ -2.01
HLA-DMAP28067 AC245389.1-201ENST00000605141 529 ntBASIC2.5□□□□□ -2.01
HLA-DMAP28067 AC138932.5-201ENST00000617759 563 ntBASIC2.5□□□□□ -2.01
HLA-DMAP28067 SNHG22-203ENST00000617833 660 ntBASIC2.5□□□□□ -2.01
HLA-DMAP28067 AL355493.4-201ENST00000618530 292 ntBASIC2.5□□□□□ -2.01
HLA-DMAP28067 AC068880.5-201ENST00000624331 290 ntBASIC2.5□□□□□ -2.01
HLA-DMAP28067 AC110079.1-202ENST00000635213 138 ntBASIC2.5□□□□□ -2.01
HLA-DMAP28067 BX649567.1-201ENST00000642071 1134 ntBASIC2.5□□□□□ -2.01
HLA-DMAP28067 AC111188.2-201ENST00000529697 1387 ntBASIC2.49□□□□□ -2.01
HLA-DMAP28067 ZNF271P-202ENST00000465539 1970 ntBASIC2.49□□□□□ -2.01
HLA-DMAP28067 MIR490-201ENST00000384865 128 ntBASIC2.49□□□□□ -2.01
HLA-DMAP28067 RPL22P22-201ENST00000395439 379 ntBASIC2.49□□□□□ -2.01
HLA-DMAP28067 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
HLA-DMAP28067 AL136372.1-201ENST00000403060 228 ntBASIC2.49□□□□□ -2.01
HLA-DMAP28067 AL356057.2-201ENST00000403318 432 ntBASIC2.49□□□□□ -2.01
HLA-DMAP28067 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC2.49□□□□□ -2.01
HLA-DMAP28067 RPL27AP8-201ENST00000424277 446 ntBASIC2.49□□□□□ -2.01
HLA-DMAP28067 UBE2D3P3-201ENST00000426992 425 ntBASIC2.49□□□□□ -2.01
HLA-DMAP28067 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.49□□□□□ -2.01
HLA-DMAP28067 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC2.49□□□□□ -2.01
HLA-DMAP28067 AC129850.1-201ENST00000436203 508 ntBASIC2.49□□□□□ -2.01
HLA-DMAP28067 AC004866.2-201ENST00000438285 481 ntBASIC2.49□□□□□ -2.01
HLA-DMAP28067 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.49□□□□□ -2.01
HLA-DMAP28067 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.49□□□□□ -2.01
HLA-DMAP28067 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HLA-DMAP28067 AL109741.2-201ENST00000455561 343 ntBASIC2.49□□□□□ -2.01
HLA-DMAP28067 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.49□□□□□ -2.01
HLA-DMAP28067 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC2.49□□□□□ -2.01
HLA-DMAP28067 snoU109.4-201ENST00000458953 143 ntBASIC2.49□□□□□ -2.01
HLA-DMAP28067 RN7SL863P-201ENST00000462370 296 ntBASIC2.49□□□□□ -2.01
HLA-DMAP28067 RPL32P14-201ENST00000463196 378 ntBASIC2.49□□□□□ -2.01
HLA-DMAP28067 AC103987.1-201ENST00000473394 348 ntBASIC2.49□□□□□ -2.01
HLA-DMAP28067 AC110794.1-201ENST00000505816 425 ntBASIC2.49□□□□□ -2.01
HLA-DMAP28067 CBX3P3-201ENST00000508108 532 ntBASIC2.49□□□□□ -2.01
HLA-DMAP28067 RNU6-334P-201ENST00000517072 102 ntBASIC2.49□□□□□ -2.01
HLA-DMAP28067 RN7SKP40-201ENST00000517211 242 ntBASIC2.49□□□□□ -2.01
HLA-DMAP28067 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC2.49□□□□□ -2.01
HLA-DMAP28067 LSM6P2-201ENST00000552208 177 ntBASIC2.49□□□□□ -2.01
HLA-DMAP28067 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC2.49□□□□□ -2.01
HLA-DMAP28067 MIR4789-201ENST00000577469 82 ntBASIC2.49□□□□□ -2.01
HLA-DMAP28067 MIR3160-1-201ENST00000577972 85 ntBASIC2.49□□□□□ -2.01
HLA-DMAP28067 MIR3609-201ENST00000582661 80 ntBASIC2.49□□□□□ -2.01
HLA-DMAP28067 MIR3605-201ENST00000583214 100 ntBASIC2.49□□□□□ -2.01
HLA-DMAP28067 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.49□□□□□ -2.01
HLA-DMAP28067 CKS1BP3-201ENST00000600888 237 ntBASIC2.49□□□□□ -2.01
HLA-DMAP28067 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.49□□□□□ -2.01
HLA-DMAP28067 AP004247.3-201ENST00000608682 624 ntBASIC2.49□□□□□ -2.01
HLA-DMAP28067 AL353748.2-201ENST00000622148 471 ntBASIC2.49□□□□□ -2.01
HLA-DMAP28067 CR381653.2-201ENST00000624041 768 ntBASIC2.49□□□□□ -2.01
HLA-DMAP28067 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
HLA-DMAP28067 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.49□□□□□ -2.01
HLA-DMAP28067 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
HLA-DMAP28067 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
HLA-DMAP28067 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
HLA-DMAP28067 RNU6-353P-201ENST00000364266 108 ntBASIC2.48□□□□□ -2.01
HLA-DMAP28067 MIR512-1-201ENST00000384913 84 ntBASIC2.48□□□□□ -2.01
HLA-DMAP28067 ARF4P3-201ENST00000397387 509 ntBASIC2.48□□□□□ -2.01
HLA-DMAP28067 RNA5SP181-201ENST00000410246 98 ntBASIC2.48□□□□□ -2.01
HLA-DMAP28067 AC092447.6-201ENST00000414578 210 ntBASIC2.48□□□□□ -2.01
HLA-DMAP28067 AL356320.2-201ENST00000417263 507 ntBASIC2.48□□□□□ -2.01
HLA-DMAP28067 RPF2P1-201ENST00000424137 906 ntBASIC2.48□□□□□ -2.01
HLA-DMAP28067 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.48□□□□□ -2.01
HLA-DMAP28067 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.48□□□□□ -2.01
HLA-DMAP28067 AL158053.1-201ENST00000441503 453 ntBASIC2.48□□□□□ -2.01
HLA-DMAP28067 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
HLA-DMAP28067 AL162389.1-201ENST00000449233 177 ntBASIC2.48□□□□□ -2.01
HLA-DMAP28067 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.48□□□□□ -2.01
HLA-DMAP28067 SNRPGP6-201ENST00000451124 220 ntBASIC2.48□□□□□ -2.01
HLA-DMAP28067 AC010099.1-201ENST00000455434 375 ntBASIC2.48□□□□□ -2.01
HLA-DMAP28067 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.48□□□□□ -2.01
HLA-DMAP28067 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
HLA-DMAP28067 SETP6-201ENST00000479329 568 ntBASIC2.48□□□□□ -2.01
HLA-DMAP28067 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms