Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
RFX1P22670 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
RFX1P22670 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
RFX1P22670 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RFX1P22670 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
RFX1P22670 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RFX1P22670 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
RFX1P22670 MIR133A2-201ENST00000347538 102 ntBASIC5.96□□□□□ -1.46
RFX1P22670 Y_RNA.135-201ENST00000363439 95 ntBASIC5.96□□□□□ -1.46
RFX1P22670 Y_RNA.145-201ENST00000363527 102 ntBASIC5.96□□□□□ -1.46
RFX1P22670 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
RFX1P22670 SNORA51.8-201ENST00000384234 132 ntBASIC5.96□□□□□ -1.46
RFX1P22670 Y_RNA.482-201ENST00000384377 111 ntBASIC5.96□□□□□ -1.46
RFX1P22670 MIR550A3-201ENST00000390735 95 ntBASIC5.96□□□□□ -1.46
RFX1P22670 AL139397.2-201ENST00000404529 772 ntBASIC5.96□□□□□ -1.46
RFX1P22670 VDAC1P9-201ENST00000412766 841 ntBASIC5.96□□□□□ -1.46
RFX1P22670 BX682237.1-201ENST00000415016 335 ntBASIC5.96□□□□□ -1.46
RFX1P22670 OR2AH1P-201ENST00000425717 928 ntBASIC5.96□□□□□ -1.46
RFX1P22670 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.96□□□□□ -1.46
RFX1P22670 CYCSP6-201ENST00000434498 302 ntBASIC5.96□□□□□ -1.46
RFX1P22670 AL589765.3-201ENST00000446084 462 ntBASIC5.96□□□□□ -1.46
RFX1P22670 AC104058.1-201ENST00000448028 297 ntBASIC5.96□□□□□ -1.46
RFX1P22670 MTND1P17-201ENST00000448961 204 ntBASIC5.96□□□□□ -1.46
RFX1P22670 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.96□□□□□ -1.46
RFX1P22670 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
RFX1P22670 RPS18P6-201ENST00000476880 458 ntBASIC5.96□□□□□ -1.46
RFX1P22670 RN7SL727P-201ENST00000482164 296 ntBASIC5.96□□□□□ -1.46
RFX1P22670 AC008953.1-201ENST00000497334 318 ntBASIC5.96□□□□□ -1.46
RFX1P22670 NRBF2P4-201ENST00000520874 850 ntBASIC5.96□□□□□ -1.46
RFX1P22670 COPS8P3-201ENST00000526024 482 ntBASIC5.96□□□□□ -1.46
RFX1P22670 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC5.96□□□□□ -1.46
RFX1P22670 OR4H12P-201ENST00000556269 907 ntBASIC5.96□□□□□ -1.46
RFX1P22670 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.96□□□□□ -1.46
RFX1P22670 MIR5690-201ENST00000583739 73 ntBASIC5.96□□□□□ -1.46
RFX1P22670 AC067852.3-201ENST00000589177 561 ntBASIC5.96□□□□□ -1.46
RFX1P22670 AC022893.3-201ENST00000607665 437 ntBASIC5.96□□□□□ -1.46
RFX1P22670 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.96□□□□□ -1.46
RFX1P22670 U2.17-201ENST00000611454 95 ntBASIC5.96□□□□□ -1.46
RFX1P22670 AC068870.2-201ENST00000620635 389 ntBASIC5.96□□□□□ -1.46
RFX1P22670 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.96□□□□□ -1.46
RFX1P22670 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.96□□□□□ -1.46
RFX1P22670 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
RFX1P22670 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
RFX1P22670 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
RFX1P22670 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC5.96□□□□□ -1.46
RFX1P22670 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RFX1P22670 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
RFX1P22670 AC125336.1-201ENST00000508893 2827 ntBASIC5.95□□□□□ -1.46
RFX1P22670 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.95□□□□□ -1.46
RFX1P22670 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
RFX1P22670 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RFX1P22670 AC100757.1-201ENST00000616872 1835 ntBASIC5.95□□□□□ -1.46
RFX1P22670 RNU6-434P-201ENST00000384376 107 ntBASIC5.95□□□□□ -1.46
RFX1P22670 RNU6-393P-201ENST00000384475 107 ntBASIC5.95□□□□□ -1.46
RFX1P22670 SNORD70.1-201ENST00000391007 85 ntBASIC5.95□□□□□ -1.46
RFX1P22670 AL583834.1-201ENST00000406943 343 ntBASIC5.95□□□□□ -1.46
RFX1P22670 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC5.95□□□□□ -1.46
RFX1P22670 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.95□□□□□ -1.46
RFX1P22670 AC019185.1-201ENST00000442718 389 ntBASIC5.95□□□□□ -1.46
RFX1P22670 NEFMP1-201ENST00000443423 1006 ntBASIC5.95□□□□□ -1.46
RFX1P22670 H2AFZP6-201ENST00000444403 394 ntBASIC5.95□□□□□ -1.46
RFX1P22670 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC5.95□□□□□ -1.46
RFX1P22670 RNU7-167P-201ENST00000459160 62 ntBASIC5.95□□□□□ -1.46
RFX1P22670 OARD1-209ENST00000471367 401 ntTSL 2 BASIC5.95□□□□□ -1.46
RFX1P22670 RN7SL808P-201ENST00000496066 299 ntBASIC5.95□□□□□ -1.46
RFX1P22670 RPS27P27-201ENST00000498779 255 ntBASIC5.95□□□□□ -1.46
RFX1P22670 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC5.95□□□□□ -1.46
RFX1P22670 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.95□□□□□ -1.46
RFX1P22670 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.95□□□□□ -1.46
RFX1P22670 RNU6-390P-201ENST00000516259 103 ntBASIC5.95□□□□□ -1.46
RFX1P22670 RN7SKP258-201ENST00000517151 304 ntBASIC5.95□□□□□ -1.46
RFX1P22670 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC5.95□□□□□ -1.46
RFX1P22670 RGS4-209ENST00000531057 544 ntTSL 4 BASIC5.95□□□□□ -1.46
RFX1P22670 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.95□□□□□ -1.46
RFX1P22670 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.95□□□□□ -1.46
RFX1P22670 RPL23AP84-201ENST00000571193 464 ntBASIC5.95□□□□□ -1.46
RFX1P22670 AC016925.2-201ENST00000605108 242 ntBASIC5.95□□□□□ -1.46
RFX1P22670 AL670379.4-201ENST00000605279 254 ntBASIC5.95□□□□□ -1.46
RFX1P22670 RNA5SP108-201ENST00000605921 117 ntBASIC5.95□□□□□ -1.46
RFX1P22670 AC100827.5-201ENST00000615883 426 ntBASIC5.95□□□□□ -1.46
RFX1P22670 AC099669.2-201ENST00000616549 437 ntBASIC5.95□□□□□ -1.46
RFX1P22670 AC098657.3-201ENST00000620434 263 ntBASIC5.95□□□□□ -1.46
RFX1P22670 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RFX1P22670 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
RFX1P22670 AC139769.1-204ENST00000472297 1931 ntBASIC5.95□□□□□ -1.46
RFX1P22670 ADAM24P-201ENST00000398655 2101 ntBASIC5.95□□□□□ -1.46
RFX1P22670 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
RFX1P22670 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RFX1P22670 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
RFX1P22670 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RFX1P22670 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RFX1P22670 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RFX1P22670 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RFX1P22670 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RFX1P22670 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RFX1P22670 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RFX1P22670 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RFX1P22670 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
RFX1P22670 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RFX1P22670 RNA5SP219-201ENST00000390940 113 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms