Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 RNA5SP337-201ENST00000517007 109 ntBASIC6.52□□□□□ -1.37
CSB-PGBD3P0DP91 NARSP2-201ENST00000518524 679 ntBASIC6.52□□□□□ -1.37
CSB-PGBD3P0DP91 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC6.52□□□□□ -1.37
CSB-PGBD3P0DP91 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC6.52□□□□□ -1.37
CSB-PGBD3P0DP91 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC6.52□□□□□ -1.37
CSB-PGBD3P0DP91 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC6.52□□□□□ -1.37
CSB-PGBD3P0DP91 PYM1-205ENST00000547925 499 ntTSL 3 BASIC6.52□□□□□ -1.37
CSB-PGBD3P0DP91 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC6.52□□□□□ -1.37
CSB-PGBD3P0DP91 AL356218.2-201ENST00000605264 187 ntBASIC6.52□□□□□ -1.37
CSB-PGBD3P0DP91 AL365434.2-201ENST00000607979 234 ntBASIC6.52□□□□□ -1.37
CSB-PGBD3P0DP91 AC010632.3-201ENST00000611377 369 ntBASIC6.52□□□□□ -1.37
CSB-PGBD3P0DP91 U4.1-201ENST00000620349 87 ntBASIC6.52□□□□□ -1.37
CSB-PGBD3P0DP91 AL451142.2-201ENST00000429076 2090 ntBASIC6.52□□□□□ -1.37
CSB-PGBD3P0DP91 AC009902.3-201ENST00000606235 2172 ntBASIC6.52□□□□□ -1.37
CSB-PGBD3P0DP91 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CSB-PGBD3P0DP91 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
CSB-PGBD3P0DP91 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC6.51□□□□□ -1.37
CSB-PGBD3P0DP91 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
CSB-PGBD3P0DP91 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
CSB-PGBD3P0DP91 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
CSB-PGBD3P0DP91 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC6.51□□□□□ -1.37
CSB-PGBD3P0DP91 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.51□□□□□ -1.37
CSB-PGBD3P0DP91 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
CSB-PGBD3P0DP91 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CSB-PGBD3P0DP91 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
CSB-PGBD3P0DP91 AC008758.3-201ENST00000507003 1829 ntBASIC6.51□□□□□ -1.37
CSB-PGBD3P0DP91 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
CSB-PGBD3P0DP91 RNA5SP447-201ENST00000363749 119 ntBASIC6.51□□□□□ -1.37
CSB-PGBD3P0DP91 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CSB-PGBD3P0DP91 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
CSB-PGBD3P0DP91 RPL7P60-201ENST00000397636 735 ntBASIC6.51□□□□□ -1.37
CSB-PGBD3P0DP91 AL357515.1-201ENST00000402967 542 ntBASIC6.51□□□□□ -1.37
CSB-PGBD3P0DP91 AL590609.2-201ENST00000421430 368 ntBASIC6.51□□□□□ -1.37
CSB-PGBD3P0DP91 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC6.51□□□□□ -1.37
CSB-PGBD3P0DP91 AC138761.5-201ENST00000433967 325 ntBASIC6.51□□□□□ -1.37
CSB-PGBD3P0DP91 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
CSB-PGBD3P0DP91 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC6.51□□□□□ -1.37
CSB-PGBD3P0DP91 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC6.51□□□□□ -1.37
CSB-PGBD3P0DP91 AC104651.2-201ENST00000447549 528 ntBASIC6.51□□□□□ -1.37
CSB-PGBD3P0DP91 BX276092.4-201ENST00000452056 248 ntBASIC6.51□□□□□ -1.37
CSB-PGBD3P0DP91 AL356981.1-201ENST00000454879 684 ntBASIC6.51□□□□□ -1.37
CSB-PGBD3P0DP91 HMGB1P30-201ENST00000492455 606 ntBASIC6.51□□□□□ -1.37
CSB-PGBD3P0DP91 AC106872.2-201ENST00000494303 480 ntBASIC6.51□□□□□ -1.37
CSB-PGBD3P0DP91 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC6.51□□□□□ -1.37
CSB-PGBD3P0DP91 AC104136.1-201ENST00000512969 394 ntBASIC6.51□□□□□ -1.37
CSB-PGBD3P0DP91 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC6.51□□□□□ -1.37
CSB-PGBD3P0DP91 RNU6-988P-201ENST00000519081 107 ntBASIC6.51□□□□□ -1.37
CSB-PGBD3P0DP91 AC100784.1-201ENST00000522790 310 ntBASIC6.51□□□□□ -1.37
CSB-PGBD3P0DP91 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC6.51□□□□□ -1.37
CSB-PGBD3P0DP91 AC133555.2-201ENST00000550213 292 ntBASIC6.51□□□□□ -1.37
CSB-PGBD3P0DP91 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC6.51□□□□□ -1.37
CSB-PGBD3P0DP91 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC6.51□□□□□ -1.37
CSB-PGBD3P0DP91 NDUFB4P11-201ENST00000560510 395 ntBASIC6.51□□□□□ -1.37
CSB-PGBD3P0DP91 AC008269.2-201ENST00000561915 1105 ntBASIC6.51□□□□□ -1.37
CSB-PGBD3P0DP91 MIR4512-201ENST00000583257 77 ntBASIC6.51□□□□□ -1.37
CSB-PGBD3P0DP91 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CSB-PGBD3P0DP91 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC6.51□□□□□ -1.37
CSB-PGBD3P0DP91 HMGB1P24-202ENST00000615653 685 ntBASIC6.51□□□□□ -1.37
CSB-PGBD3P0DP91 AL159972.1-201ENST00000625150 448 ntBASIC6.51□□□□□ -1.37
CSB-PGBD3P0DP91 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC6.51□□□□□ -1.37
CSB-PGBD3P0DP91 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CSB-PGBD3P0DP91 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
CSB-PGBD3P0DP91 AC105074.1-201ENST00000623380 3095 ntBASIC6.51□□□□□ -1.37
CSB-PGBD3P0DP91 AC004656.1-201ENST00000568479 4951 ntBASIC6.5□□□□□ -1.37
CSB-PGBD3P0DP91 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CSB-PGBD3P0DP91 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC6.5□□□□□ -1.37
CSB-PGBD3P0DP91 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC6.5□□□□□ -1.37
CSB-PGBD3P0DP91 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.5□□□□□ -1.37
CSB-PGBD3P0DP91 Y_RNA.126-201ENST00000363382 111 ntBASIC6.5□□□□□ -1.37
CSB-PGBD3P0DP91 RNU6-108P-201ENST00000365558 107 ntBASIC6.5□□□□□ -1.37
CSB-PGBD3P0DP91 MIR129-1-201ENST00000384972 72 ntBASIC6.5□□□□□ -1.37
CSB-PGBD3P0DP91 MTCYBP4-201ENST00000401524 249 ntBASIC6.5□□□□□ -1.37
CSB-PGBD3P0DP91 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC6.5□□□□□ -1.37
CSB-PGBD3P0DP91 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC6.5□□□□□ -1.37
CSB-PGBD3P0DP91 AL732292.1-201ENST00000426692 226 ntBASIC6.5□□□□□ -1.37
CSB-PGBD3P0DP91 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC6.5□□□□□ -1.37
CSB-PGBD3P0DP91 GPR143P-201ENST00000434155 205 ntBASIC6.5□□□□□ -1.37
CSB-PGBD3P0DP91 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC6.5□□□□□ -1.37
CSB-PGBD3P0DP91 AC090804.1-201ENST00000448870 490 ntBASIC6.5□□□□□ -1.37
CSB-PGBD3P0DP91 AC010655.3-201ENST00000478818 450 ntBASIC6.5□□□□□ -1.37
CSB-PGBD3P0DP91 HMGB1P21-201ENST00000502313 581 ntBASIC6.5□□□□□ -1.37
CSB-PGBD3P0DP91 SCARNA22-201ENST00000503991 125 ntBASIC6.5□□□□□ -1.37
CSB-PGBD3P0DP91 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC6.5□□□□□ -1.37
CSB-PGBD3P0DP91 SMURF2P1-201ENST00000514992 481 ntBASIC6.5□□□□□ -1.37
CSB-PGBD3P0DP91 RN7SKP82-201ENST00000516786 223 ntBASIC6.5□□□□□ -1.37
CSB-PGBD3P0DP91 RN7SKP277-201ENST00000516895 283 ntBASIC6.5□□□□□ -1.37
CSB-PGBD3P0DP91 RNU6-1271P-201ENST00000517049 105 ntBASIC6.5□□□□□ -1.37
CSB-PGBD3P0DP91 AC090572.1-201ENST00000519251 160 ntBASIC6.5□□□□□ -1.37
CSB-PGBD3P0DP91 AP003072.2-201ENST00000527756 676 ntBASIC6.5□□□□□ -1.37
CSB-PGBD3P0DP91 BNIP3P6-201ENST00000549284 499 ntBASIC6.5□□□□□ -1.37
CSB-PGBD3P0DP91 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.5□□□□□ -1.37
CSB-PGBD3P0DP91 AC022726.1-201ENST00000587475 207 ntBASIC6.5□□□□□ -1.37
CSB-PGBD3P0DP91 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC6.5□□□□□ -1.37
CSB-PGBD3P0DP91 uc_338.15-201ENST00000615470 191 ntBASIC6.5□□□□□ -1.37
CSB-PGBD3P0DP91 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CSB-PGBD3P0DP91 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CSB-PGBD3P0DP91 ERVFRD-3-201ENST00000578561 1617 ntBASIC6.5□□□□□ -1.37
CSB-PGBD3P0DP91 ASNSP3-201ENST00000451989 1306 ntBASIC6.5□□□□□ -1.37
CSB-PGBD3P0DP91 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
CSB-PGBD3P0DP91 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms