Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.65□□□□□ -1.67
HLA-DOAP06340 RPL21P5-201ENST00000554662 472 ntBASIC4.65□□□□□ -1.67
HLA-DOAP06340 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.65□□□□□ -1.67
HLA-DOAP06340 C8orf59P2-201ENST00000603441 271 ntBASIC4.65□□□□□ -1.67
HLA-DOAP06340 AL139286.1-201ENST00000604465 483 ntBASIC4.65□□□□□ -1.67
HLA-DOAP06340 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-DOAP06340 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-DOAP06340 AL592295.2-201ENST00000612578 206 ntBASIC4.65□□□□□ -1.67
HLA-DOAP06340 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-DOAP06340 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-DOAP06340 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.65□□□□□ -1.67
HLA-DOAP06340 AC055839.1-201ENST00000634467 498 ntBASIC4.65□□□□□ -1.67
HLA-DOAP06340 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.65□□□□□ -1.67
HLA-DOAP06340 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-DOAP06340 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.67
HLA-DOAP06340 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.65□□□□□ -1.67
HLA-DOAP06340 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.65□□□□□ -1.67
HLA-DOAP06340 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.65□□□□□ -1.67
HLA-DOAP06340 AC107081.3-201ENST00000612715 2034 ntBASIC4.65□□□□□ -1.67
HLA-DOAP06340 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.65□□□□□ -1.67
HLA-DOAP06340 AP002907.1-201ENST00000606361 1430 ntBASIC4.64□□□□□ -1.67
HLA-DOAP06340 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DOAP06340 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
HLA-DOAP06340 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DOAP06340 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DOAP06340 RNU6-249P-201ENST00000363016 102 ntBASIC4.64□□□□□ -1.67
HLA-DOAP06340 U8.3-201ENST00000363321 132 ntBASIC4.64□□□□□ -1.67
HLA-DOAP06340 RNY4P14-201ENST00000363656 96 ntBASIC4.64□□□□□ -1.67
HLA-DOAP06340 RNU6-761P-201ENST00000384148 107 ntBASIC4.64□□□□□ -1.67
HLA-DOAP06340 RNU6-441P-201ENST00000384545 106 ntBASIC4.64□□□□□ -1.67
HLA-DOAP06340 MT-TL1-201ENST00000386347 75 ntBASIC4.64□□□□□ -1.67
HLA-DOAP06340 RNA5SP171-201ENST00000391071 115 ntBASIC4.64□□□□□ -1.67
HLA-DOAP06340 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DOAP06340 GSTM3P2-201ENST00000412746 530 ntBASIC4.64□□□□□ -1.67
HLA-DOAP06340 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.64□□□□□ -1.67
HLA-DOAP06340 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.64□□□□□ -1.67
HLA-DOAP06340 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.64□□□□□ -1.67
HLA-DOAP06340 PTMAP3-201ENST00000447474 330 ntBASIC4.64□□□□□ -1.67
HLA-DOAP06340 AC079448.1-201ENST00000449377 373 ntBASIC4.64□□□□□ -1.67
HLA-DOAP06340 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.64□□□□□ -1.67
HLA-DOAP06340 HMGN3P1-201ENST00000453847 193 ntBASIC4.64□□□□□ -1.67
HLA-DOAP06340 SNRPFP4-201ENST00000456366 242 ntBASIC4.64□□□□□ -1.67
HLA-DOAP06340 RNU7-136P-201ENST00000458819 69 ntBASIC4.64□□□□□ -1.67
HLA-DOAP06340 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.64□□□□□ -1.67
HLA-DOAP06340 POU5F1P7-201ENST00000508759 541 ntBASIC4.64□□□□□ -1.67
HLA-DOAP06340 AC006499.6-201ENST00000511169 607 ntBASIC4.64□□□□□ -1.67
HLA-DOAP06340 AC093853.1-201ENST00000515689 483 ntBASIC4.64□□□□□ -1.67
HLA-DOAP06340 TRMT10BP1-201ENST00000519377 943 ntBASIC4.64□□□□□ -1.67
HLA-DOAP06340 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.64□□□□□ -1.67
HLA-DOAP06340 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.64□□□□□ -1.67
HLA-DOAP06340 OR4A12P-201ENST00000530847 918 ntBASIC4.64□□□□□ -1.67
HLA-DOAP06340 SULT1C2P1-202ENST00000562418 459 ntBASIC4.64□□□□□ -1.67
HLA-DOAP06340 AL133457.1-201ENST00000564251 987 ntBASIC4.64□□□□□ -1.67
HLA-DOAP06340 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.64□□□□□ -1.67
HLA-DOAP06340 AC087499.8-201ENST00000578406 226 ntBASIC4.64□□□□□ -1.67
HLA-DOAP06340 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC4.64□□□□□ -1.67
HLA-DOAP06340 MIR4444-1-201ENST00000581696 74 ntBASIC4.64□□□□□ -1.67
HLA-DOAP06340 MIR4444-2-201ENST00000584390 74 ntBASIC4.64□□□□□ -1.67
HLA-DOAP06340 HMGN1P30-201ENST00000589286 268 ntBASIC4.64□□□□□ -1.67
HLA-DOAP06340 AP003117.2-201ENST00000606010 545 ntBASIC4.64□□□□□ -1.67
HLA-DOAP06340 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.64□□□□□ -1.67
HLA-DOAP06340 AC103710.1-201ENST00000610003 901 ntBASIC4.64□□□□□ -1.67
HLA-DOAP06340 AL121772.2-201ENST00000614331 297 ntBASIC4.64□□□□□ -1.67
HLA-DOAP06340 MIR7154-201ENST00000620673 73 ntBASIC4.64□□□□□ -1.67
HLA-DOAP06340 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.64□□□□□ -1.67
HLA-DOAP06340 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DOAP06340 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DOAP06340 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.64□□□□□ -1.67
HLA-DOAP06340 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DOAP06340 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DOAP06340 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DOAP06340 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DOAP06340 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
HLA-DOAP06340 MTCO1P7-201ENST00000419523 1542 ntBASIC4.63□□□□□ -1.67
HLA-DOAP06340 SAMMSON-213ENST00000641336 1521 ntBASIC4.63□□□□□ -1.67
HLA-DOAP06340 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DOAP06340 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DOAP06340 RNA5SP124-201ENST00000362739 110 ntBASIC4.63□□□□□ -1.67
HLA-DOAP06340 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
HLA-DOAP06340 DHFRP6-201ENST00000401776 268 ntBASIC4.63□□□□□ -1.67
HLA-DOAP06340 Y_RNA.608-201ENST00000410647 95 ntBASIC4.63□□□□□ -1.67
HLA-DOAP06340 RNU4-55P-201ENST00000410731 137 ntBASIC4.63□□□□□ -1.67
HLA-DOAP06340 AC109583.1-201ENST00000432156 268 ntBASIC4.63□□□□□ -1.67
HLA-DOAP06340 GOT2P5-201ENST00000433995 546 ntBASIC4.63□□□□□ -1.67
HLA-DOAP06340 MTCYBP45-201ENST00000435243 565 ntBASIC4.63□□□□□ -1.67
HLA-DOAP06340 AC009961.2-201ENST00000435771 251 ntBASIC4.63□□□□□ -1.67
HLA-DOAP06340 AC083863.1-201ENST00000438811 231 ntBASIC4.63□□□□□ -1.67
HLA-DOAP06340 RANP8-201ENST00000444720 713 ntBASIC4.63□□□□□ -1.67
HLA-DOAP06340 MTND3P10-201ENST00000450967 341 ntBASIC4.63□□□□□ -1.67
HLA-DOAP06340 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
HLA-DOAP06340 MTND1P3-201ENST00000484956 952 ntBASIC4.63□□□□□ -1.67
HLA-DOAP06340 KLRA1P-201ENST00000503499 986 ntBASIC4.63□□□□□ -1.67
HLA-DOAP06340 TMEM251P1-201ENST00000503717 318 ntBASIC4.63□□□□□ -1.67
HLA-DOAP06340 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC4.63□□□□□ -1.67
HLA-DOAP06340 AC105914.1-201ENST00000511798 226 ntBASIC4.63□□□□□ -1.67
HLA-DOAP06340 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.63□□□□□ -1.67
HLA-DOAP06340 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.63□□□□□ -1.67
HLA-DOAP06340 RNU2-46P-201ENST00000517038 113 ntBASIC4.63□□□□□ -1.67
HLA-DOAP06340 IGKV2-38-201ENST00000517443 247 ntBASIC4.63□□□□□ -1.67
HLA-DOAP06340 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms