Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC016027.5-201ENST00000427227 210 ntBASIC5.35□□□□□ -1.55
PDGFAP04085 AC093151.1-201ENST00000427711 313 ntBASIC5.35□□□□□ -1.55
PDGFAP04085 GSTA11P-201ENST00000452866 669 ntBASIC5.35□□□□□ -1.55
PDGFAP04085 FRG2FP-204ENST00000453982 852 ntBASIC5.35□□□□□ -1.55
PDGFAP04085 SNORD5.1-201ENST00000458800 75 ntBASIC5.35□□□□□ -1.55
PDGFAP04085 RPS3AP41-201ENST00000462701 778 ntBASIC5.35□□□□□ -1.55
PDGFAP04085 AC103987.1-201ENST00000473394 348 ntBASIC5.35□□□□□ -1.55
PDGFAP04085 RPL31P60-201ENST00000478450 367 ntBASIC5.35□□□□□ -1.55
PDGFAP04085 AC231760.1-201ENST00000498002 260 ntBASIC5.35□□□□□ -1.55
PDGFAP04085 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.35□□□□□ -1.55
PDGFAP04085 MTND4LP22-201ENST00000508209 276 ntBASIC5.35□□□□□ -1.55
PDGFAP04085 AC116655.1-201ENST00000508324 901 ntBASIC5.35□□□□□ -1.55
PDGFAP04085 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.35□□□□□ -1.55
PDGFAP04085 RN7SKP258-201ENST00000517151 304 ntBASIC5.35□□□□□ -1.55
PDGFAP04085 SNORD116.3-201ENST00000517176 78 ntBASIC5.35□□□□□ -1.55
PDGFAP04085 RNU6-840P-201ENST00000517275 65 ntBASIC5.35□□□□□ -1.55
PDGFAP04085 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC5.35□□□□□ -1.55
PDGFAP04085 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC5.35□□□□□ -1.55
PDGFAP04085 GNAI2P1-201ENST00000541815 315 ntBASIC5.35□□□□□ -1.55
PDGFAP04085 AC025423.5-201ENST00000550230 219 ntBASIC5.35□□□□□ -1.55
PDGFAP04085 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.35□□□□□ -1.55
PDGFAP04085 AL390726.5-202ENST00000564800 256 ntBASIC5.35□□□□□ -1.55
PDGFAP04085 PRR13P7-201ENST00000605538 430 ntBASIC5.35□□□□□ -1.55
PDGFAP04085 AL161423.1-201ENST00000613700 262 ntBASIC5.35□□□□□ -1.55
PDGFAP04085 AC007792.1-201ENST00000623023 402 ntBASIC5.35□□□□□ -1.55
PDGFAP04085 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.35□□□□□ -1.55
PDGFAP04085 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
PDGFAP04085 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PDGFAP04085 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.35□□□□□ -1.55
PDGFAP04085 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PDGFAP04085 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
PDGFAP04085 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
PDGFAP04085 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PDGFAP04085 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PDGFAP04085 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PDGFAP04085 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.35□□□□□ -1.55
PDGFAP04085 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.34□□□□□ -1.55
PDGFAP04085 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.34□□□□□ -1.55
PDGFAP04085 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.34□□□□□ -1.55
PDGFAP04085 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PDGFAP04085 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PDGFAP04085 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PDGFAP04085 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.34□□□□□ -1.55
PDGFAP04085 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PDGFAP04085 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PDGFAP04085 RNU1-115P-201ENST00000365329 160 ntBASIC5.34□□□□□ -1.55
PDGFAP04085 Y_RNA.480-201ENST00000384364 102 ntBASIC5.34□□□□□ -1.55
PDGFAP04085 RNU6-45P-201ENST00000384471 107 ntBASIC5.34□□□□□ -1.55
PDGFAP04085 SSXP9-201ENST00000417503 292 ntBASIC5.34□□□□□ -1.55
PDGFAP04085 NUP35P1-201ENST00000422734 947 ntBASIC5.34□□□□□ -1.55
PDGFAP04085 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.34□□□□□ -1.55
PDGFAP04085 AL591212.2-201ENST00000433923 257 ntBASIC5.34□□□□□ -1.55
PDGFAP04085 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC5.34□□□□□ -1.55
PDGFAP04085 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC5.34□□□□□ -1.55
PDGFAP04085 KRT8P51-201ENST00000438938 274 ntBASIC5.34□□□□□ -1.55
PDGFAP04085 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.34□□□□□ -1.55
PDGFAP04085 AC100832.1-201ENST00000471945 383 ntBASIC5.34□□□□□ -1.55
PDGFAP04085 RPS4XP1-201ENST00000482189 787 ntBASIC5.34□□□□□ -1.55
PDGFAP04085 RPL32P33-201ENST00000487023 394 ntBASIC5.34□□□□□ -1.55
PDGFAP04085 RN7SL30P-201ENST00000488416 306 ntBASIC5.34□□□□□ -1.55
PDGFAP04085 RPS27AP13-201ENST00000498403 237 ntBASIC5.34□□□□□ -1.55
PDGFAP04085 HIGD1AP14-201ENST00000507617 282 ntBASIC5.34□□□□□ -1.55
PDGFAP04085 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.34□□□□□ -1.55
PDGFAP04085 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.34□□□□□ -1.55
PDGFAP04085 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.34□□□□□ -1.55
PDGFAP04085 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
PDGFAP04085 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC5.34□□□□□ -1.55
PDGFAP04085 AC005899.2-201ENST00000584353 90 ntBASIC5.34□□□□□ -1.55
PDGFAP04085 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC5.34□□□□□ -1.55
PDGFAP04085 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.34□□□□□ -1.55
PDGFAP04085 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
PDGFAP04085 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PDGFAP04085 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
PDGFAP04085 AC114774.1-201ENST00000507410 1770 ntBASIC5.34□□□□□ -1.56
PDGFAP04085 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
PDGFAP04085 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
PDGFAP04085 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
PDGFAP04085 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
PDGFAP04085 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PDGFAP04085 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PDGFAP04085 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PDGFAP04085 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.33□□□□□ -1.56
PDGFAP04085 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.33□□□□□ -1.56
PDGFAP04085 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.33□□□□□ -1.56
PDGFAP04085 AC139769.1-204ENST00000472297 1931 ntBASIC5.33□□□□□ -1.56
PDGFAP04085 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PDGFAP04085 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.33□□□□□ -1.56
PDGFAP04085 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.33□□□□□ -1.56
PDGFAP04085 AC090971.4-201ENST00000560291 1800 ntBASIC5.33□□□□□ -1.56
PDGFAP04085 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PDGFAP04085 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.33□□□□□ -1.56
PDGFAP04085 RNA5SP234-201ENST00000363916 119 ntBASIC5.33□□□□□ -1.56
PDGFAP04085 RNA5SP211-201ENST00000365516 117 ntBASIC5.33□□□□□ -1.56
PDGFAP04085 RNU6-14P-201ENST00000384630 106 ntBASIC5.33□□□□□ -1.56
PDGFAP04085 MIR585-201ENST00000384887 94 ntBASIC5.33□□□□□ -1.56
PDGFAP04085 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.33□□□□□ -1.56
PDGFAP04085 RN7SKP216-201ENST00000411050 312 ntBASIC5.33□□□□□ -1.56
PDGFAP04085 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.33□□□□□ -1.56
PDGFAP04085 CBX3P6-201ENST00000430257 527 ntBASIC5.33□□□□□ -1.56
PDGFAP04085 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms