Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.56□□□□□ -1.84
COL2A1P02458 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.56□□□□□ -1.84
COL2A1P02458 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.56□□□□□ -1.84
COL2A1P02458 NEK4P1-201ENST00000433383 879 ntBASIC3.56□□□□□ -1.84
COL2A1P02458 AC129850.1-201ENST00000436203 508 ntBASIC3.56□□□□□ -1.84
COL2A1P02458 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
COL2A1P02458 AC093156.1-201ENST00000440382 670 ntBASIC3.56□□□□□ -1.84
COL2A1P02458 RAB28P3-201ENST00000448325 597 ntBASIC3.56□□□□□ -1.84
COL2A1P02458 FDX1P2-201ENST00000450769 375 ntBASIC3.56□□□□□ -1.84
COL2A1P02458 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.56□□□□□ -1.84
COL2A1P02458 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.56□□□□□ -1.84
COL2A1P02458 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.56□□□□□ -1.84
COL2A1P02458 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.56□□□□□ -1.84
COL2A1P02458 AC084024.2-201ENST00000503480 791 ntBASIC3.56□□□□□ -1.84
COL2A1P02458 VWA8P1-201ENST00000510889 176 ntBASIC3.56□□□□□ -1.84
COL2A1P02458 AC008837.1-201ENST00000511513 412 ntBASIC3.56□□□□□ -1.84
COL2A1P02458 Y_RNA.673-201ENST00000516306 88 ntBASIC3.56□□□□□ -1.84
COL2A1P02458 NPM1P52-201ENST00000518264 846 ntBASIC3.56□□□□□ -1.84
COL2A1P02458 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.56□□□□□ -1.84
COL2A1P02458 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.56□□□□□ -1.84
COL2A1P02458 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.56□□□□□ -1.84
COL2A1P02458 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.56□□□□□ -1.84
COL2A1P02458 MIR4435-1-201ENST00000582552 80 ntBASIC3.56□□□□□ -1.84
COL2A1P02458 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.56□□□□□ -1.84
COL2A1P02458 MIR3611-201ENST00000584484 83 ntBASIC3.56□□□□□ -1.84
COL2A1P02458 AC073544.2-201ENST00000601155 540 ntBASIC3.56□□□□□ -1.84
COL2A1P02458 VN1R82P-201ENST00000601481 356 ntBASIC3.56□□□□□ -1.84
COL2A1P02458 AL031281.1-201ENST00000604049 488 ntBASIC3.56□□□□□ -1.84
COL2A1P02458 DPRXP5-201ENST00000604662 539 ntBASIC3.56□□□□□ -1.84
COL2A1P02458 AC106791.2-201ENST00000604680 391 ntBASIC3.56□□□□□ -1.84
COL2A1P02458 AC016877.3-201ENST00000606778 504 ntBASIC3.56□□□□□ -1.84
COL2A1P02458 AC080013.4-201ENST00000607624 649 ntBASIC3.56□□□□□ -1.84
COL2A1P02458 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.56□□□□□ -1.84
COL2A1P02458 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
COL2A1P02458 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC3.56□□□□□ -1.84
COL2A1P02458 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
COL2A1P02458 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
COL2A1P02458 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.55□□□□□ -1.84
COL2A1P02458 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
COL2A1P02458 Y_RNA.41-201ENST00000362646 102 ntBASIC3.55□□□□□ -1.84
COL2A1P02458 RNU6-553P-201ENST00000364047 96 ntBASIC3.55□□□□□ -1.84
COL2A1P02458 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.55□□□□□ -1.84
COL2A1P02458 AC246680.2-201ENST00000422106 389 ntBASIC3.55□□□□□ -1.84
COL2A1P02458 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.55□□□□□ -1.84
COL2A1P02458 RAC1P8-201ENST00000427086 527 ntBASIC3.55□□□□□ -1.84
COL2A1P02458 DPPA2P1-201ENST00000428060 556 ntBASIC3.55□□□□□ -1.84
COL2A1P02458 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC3.55□□□□□ -1.84
COL2A1P02458 C8orf59P1-201ENST00000429930 303 ntBASIC3.55□□□□□ -1.84
COL2A1P02458 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.55□□□□□ -1.84
COL2A1P02458 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.55□□□□□ -1.84
COL2A1P02458 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.55□□□□□ -1.84
COL2A1P02458 RPL21P112-201ENST00000434403 463 ntBASIC3.55□□□□□ -1.84
COL2A1P02458 MTATP6P13-201ENST00000438531 667 ntBASIC3.55□□□□□ -1.84
COL2A1P02458 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.55□□□□□ -1.84
COL2A1P02458 TXNP1-201ENST00000441872 371 ntBASIC3.55□□□□□ -1.84
COL2A1P02458 HMGB3P6-201ENST00000444896 598 ntBASIC3.55□□□□□ -1.84
COL2A1P02458 CASP3P1-201ENST00000446037 609 ntBASIC3.55□□□□□ -1.84
COL2A1P02458 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.55□□□□□ -1.84
COL2A1P02458 AC006539.3-201ENST00000454258 129 ntBASIC3.55□□□□□ -1.84
COL2A1P02458 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.55□□□□□ -1.84
COL2A1P02458 AC244505.3-201ENST00000454598 187 ntBASIC3.55□□□□□ -1.84
COL2A1P02458 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.55□□□□□ -1.84
COL2A1P02458 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.55□□□□□ -1.84
COL2A1P02458 AC093899.1-201ENST00000457984 376 ntBASIC3.55□□□□□ -1.84
COL2A1P02458 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.55□□□□□ -1.84
COL2A1P02458 RN7SKP272-201ENST00000516988 232 ntBASIC3.55□□□□□ -1.84
COL2A1P02458 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.55□□□□□ -1.84
COL2A1P02458 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC3.55□□□□□ -1.84
COL2A1P02458 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.55□□□□□ -1.84
COL2A1P02458 AC092851.1-201ENST00000535964 478 ntBASIC3.55□□□□□ -1.84
COL2A1P02458 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.55□□□□□ -1.84
COL2A1P02458 NBEAP1-201ENST00000554452 979 ntBASIC3.55□□□□□ -1.84
COL2A1P02458 AC106734.1-201ENST00000568646 663 ntBASIC3.55□□□□□ -1.84
COL2A1P02458 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.55□□□□□ -1.84
COL2A1P02458 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
COL2A1P02458 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.55□□□□□ -1.84
COL2A1P02458 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.55□□□□□ -1.84
COL2A1P02458 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.55□□□□□ -1.84
COL2A1P02458 VN1R88P-201ENST00000596787 292 ntBASIC3.55□□□□□ -1.84
COL2A1P02458 AC072039.2-201ENST00000608883 439 ntBASIC3.55□□□□□ -1.84
COL2A1P02458 AL359535.1-201ENST00000612100 1087 ntBASIC3.55□□□□□ -1.84
COL2A1P02458 AL138478.1-201ENST00000612252 832 ntBASIC3.55□□□□□ -1.84
COL2A1P02458 VN1R74P-201ENST00000613259 503 ntBASIC3.55□□□□□ -1.84
COL2A1P02458 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
COL2A1P02458 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
COL2A1P02458 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
COL2A1P02458 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.55□□□□□ -1.84
COL2A1P02458 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
COL2A1P02458 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
COL2A1P02458 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.55□□□□□ -1.84
COL2A1P02458 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
COL2A1P02458 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
COL2A1P02458 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.54□□□□□ -1.84
COL2A1P02458 RNU5E-4P-201ENST00000364931 120 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 SNORA9.2-201ENST00000365361 133 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 Y_RNA.359-201ENST00000365498 102 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 RSL24D1P4-201ENST00000400938 484 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 RPS4XP8-201ENST00000402039 771 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 RNA5SP184-201ENST00000411071 108 ntBASIC3.54□□□□□ -1.84
COL2A1P02458 USP9YP33-201ENST00000412220 421 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms