Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.46□□□□□ -1.38
RNF40O75150 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
RNF40O75150 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.45□□□□□ -1.38
RNF40O75150 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RNF40O75150 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RNF40O75150 AC009643.2-201ENST00000603543 1448 ntBASIC6.45□□□□□ -1.38
RNF40O75150 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RNF40O75150 RNU6-1020P-201ENST00000363684 107 ntBASIC6.45□□□□□ -1.38
RNF40O75150 U3.10-201ENST00000364459 214 ntBASIC6.45□□□□□ -1.38
RNF40O75150 RN7SKP81-201ENST00000365603 331 ntBASIC6.45□□□□□ -1.38
RNF40O75150 RNU6-790P-201ENST00000384479 105 ntBASIC6.45□□□□□ -1.38
RNF40O75150 RNU6-1154P-201ENST00000391001 104 ntBASIC6.45□□□□□ -1.38
RNF40O75150 BMS1P22-201ENST00000414726 313 ntBASIC6.45□□□□□ -1.38
RNF40O75150 AC092809.3-201ENST00000415453 231 ntBASIC6.45□□□□□ -1.38
RNF40O75150 AC017079.2-201ENST00000416102 485 ntBASIC6.45□□□□□ -1.38
RNF40O75150 AC007098.1-201ENST00000420122 367 ntBASIC6.45□□□□□ -1.38
RNF40O75150 AC023141.3-201ENST00000436698 278 ntBASIC6.45□□□□□ -1.38
RNF40O75150 AL031659.1-201ENST00000447075 539 ntBASIC6.45□□□□□ -1.38
RNF40O75150 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.45□□□□□ -1.38
RNF40O75150 RNU6-62P-201ENST00000516526 102 ntBASIC6.45□□□□□ -1.38
RNF40O75150 SCARNA21.2-201ENST00000516600 166 ntBASIC6.45□□□□□ -1.38
RNF40O75150 SCARNA24.2-201ENST00000516968 130 ntBASIC6.45□□□□□ -1.38
RNF40O75150 RNA5SP400-201ENST00000517155 111 ntBASIC6.45□□□□□ -1.38
RNF40O75150 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.45□□□□□ -1.38
RNF40O75150 MEG8-215ENST00000555354 469 ntTSL 3 BASIC6.45□□□□□ -1.38
RNF40O75150 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.45□□□□□ -1.38
RNF40O75150 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.45□□□□□ -1.38
RNF40O75150 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC6.45□□□□□ -1.38
RNF40O75150 AC005332.4-201ENST00000592752 579 ntBASIC6.45□□□□□ -1.38
RNF40O75150 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.45□□□□□ -1.38
RNF40O75150 AC008962.1-201ENST00000605729 304 ntBASIC6.45□□□□□ -1.38
RNF40O75150 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC6.45□□□□□ -1.38
RNF40O75150 AL596275.2-204ENST00000641628 552 ntBASIC6.45□□□□□ -1.38
RNF40O75150 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.45□□□□□ -1.38
RNF40O75150 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RNF40O75150 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.45□□□□□ -1.38
RNF40O75150 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.45□□□□□ -1.38
RNF40O75150 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RNF40O75150 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.45□□□□□ -1.38
RNF40O75150 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
RNF40O75150 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
RNF40O75150 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.45□□□□□ -1.38
RNF40O75150 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.45□□□□□ -1.38
RNF40O75150 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RNF40O75150 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC6.44□□□□□ -1.38
RNF40O75150 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RNF40O75150 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RNF40O75150 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RNF40O75150 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RNF40O75150 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RNF40O75150 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC6.44□□□□□ -1.38
RNF40O75150 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RNF40O75150 Y_RNA.398-201ENST00000383952 99 ntBASIC6.44□□□□□ -1.38
RNF40O75150 MIR433-201ENST00000384837 93 ntBASIC6.44□□□□□ -1.38
RNF40O75150 RNU6-1168P-201ENST00000390831 104 ntBASIC6.44□□□□□ -1.38
RNF40O75150 SNORA17A-201ENST00000391185 133 ntBASIC6.44□□□□□ -1.38
RNF40O75150 U3.29-201ENST00000391296 212 ntBASIC6.44□□□□□ -1.38
RNF40O75150 AL591034.2-201ENST00000402839 359 ntBASIC6.44□□□□□ -1.38
RNF40O75150 Y_RNA.629-201ENST00000411368 105 ntBASIC6.44□□□□□ -1.38
RNF40O75150 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC6.44□□□□□ -1.38
RNF40O75150 AC140479.3-201ENST00000418944 1126 ntBASIC6.44□□□□□ -1.38
RNF40O75150 AC006946.1-201ENST00000429106 328 ntBASIC6.44□□□□□ -1.38
RNF40O75150 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC6.44□□□□□ -1.38
RNF40O75150 AP000936.3-201ENST00000438127 255 ntBASIC6.44□□□□□ -1.38
RNF40O75150 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC6.44□□□□□ -1.38
RNF40O75150 RN7SL174P-201ENST00000475578 289 ntBASIC6.44□□□□□ -1.38
RNF40O75150 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.44□□□□□ -1.38
RNF40O75150 RPL21P6-201ENST00000479171 504 ntBASIC6.44□□□□□ -1.38
RNF40O75150 RN7SL214P-201ENST00000487317 265 ntBASIC6.44□□□□□ -1.38
RNF40O75150 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.44□□□□□ -1.38
RNF40O75150 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC6.44□□□□□ -1.38
RNF40O75150 RNU4ATAC10P-201ENST00000516967 122 ntBASIC6.44□□□□□ -1.38
RNF40O75150 SNORA31.18-201ENST00000517043 134 ntBASIC6.44□□□□□ -1.38
RNF40O75150 AC090151.1-201ENST00000520784 730 ntBASIC6.44□□□□□ -1.38
RNF40O75150 AL359219.2-201ENST00000555184 348 ntBASIC6.44□□□□□ -1.38
RNF40O75150 AC018552.1-201ENST00000562099 811 ntBASIC6.44□□□□□ -1.38
RNF40O75150 AMZ2P1-203ENST00000565833 850 ntBASIC6.44□□□□□ -1.38
RNF40O75150 RN7SL802P-201ENST00000577858 299 ntBASIC6.44□□□□□ -1.38
RNF40O75150 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.44□□□□□ -1.38
RNF40O75150 AL121917.1-203ENST00000605534 577 ntBASIC6.44□□□□□ -1.38
RNF40O75150 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RNF40O75150 SNORA17.5-201ENST00000630429 132 ntBASIC6.44□□□□□ -1.38
RNF40O75150 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.44□□□□□ -1.38
RNF40O75150 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.44□□□□□ -1.38
RNF40O75150 AL031119.1-201ENST00000404707 1879 ntBASIC6.44□□□□□ -1.38
RNF40O75150 AP001541.1-201ENST00000623322 1904 ntBASIC6.44□□□□□ -1.38
RNF40O75150 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.44□□□□□ -1.38
RNF40O75150 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
RNF40O75150 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RNF40O75150 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RNF40O75150 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RNF40O75150 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.44□□□□□ -1.38
RNF40O75150 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.44□□□□□ -1.38
RNF40O75150 AL121839.2-201ENST00000565058 6943 ntBASIC6.43□□□□□ -1.38
RNF40O75150 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RNF40O75150 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RNF40O75150 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RNF40O75150 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RNF40O75150 AC068870.1-201ENST00000563737 2455 ntBASIC6.43□□□□□ -1.38
RNF40O75150 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms