Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.79□□□□□ -1.64
TRIM13O60858 SNORA25.10-201ENST00000515926 124 ntBASIC4.79□□□□□ -1.64
TRIM13O60858 RNU6-635P-201ENST00000516651 102 ntBASIC4.79□□□□□ -1.64
TRIM13O60858 RNU6-714P-201ENST00000516963 103 ntBASIC4.79□□□□□ -1.64
TRIM13O60858 RNU6-709P-201ENST00000517257 104 ntBASIC4.79□□□□□ -1.64
TRIM13O60858 SOD1P3-201ENST00000518682 454 ntBASIC4.79□□□□□ -1.64
TRIM13O60858 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.79□□□□□ -1.64
TRIM13O60858 SUMO2P20-201ENST00000520803 283 ntBASIC4.79□□□□□ -1.64
TRIM13O60858 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.79□□□□□ -1.64
TRIM13O60858 AC090502.2-201ENST00000549267 280 ntBASIC4.79□□□□□ -1.64
TRIM13O60858 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.79□□□□□ -1.64
TRIM13O60858 MTCO3P23-201ENST00000561363 289 ntBASIC4.79□□□□□ -1.64
TRIM13O60858 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.79□□□□□ -1.64
TRIM13O60858 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.79□□□□□ -1.64
TRIM13O60858 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.79□□□□□ -1.64
TRIM13O60858 AC090312.1-201ENST00000580637 348 ntBASIC4.79□□□□□ -1.64
TRIM13O60858 MIR3614-201ENST00000581261 86 ntBASIC4.79□□□□□ -1.64
TRIM13O60858 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.79□□□□□ -1.64
TRIM13O60858 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM13O60858 AC018462.2-201ENST00000605375 395 ntBASIC4.79□□□□□ -1.64
TRIM13O60858 AC121334.2-201ENST00000605387 271 ntBASIC4.79□□□□□ -1.64
TRIM13O60858 OR10AB1P-201ENST00000609613 938 ntBASIC4.79□□□□□ -1.64
TRIM13O60858 AC007546.1-201ENST00000619452 559 ntBASIC4.79□□□□□ -1.64
TRIM13O60858 AC137590.2-201ENST00000619709 240 ntBASIC4.79□□□□□ -1.64
TRIM13O60858 AC078938.1-201ENST00000620993 318 ntBASIC4.79□□□□□ -1.64
TRIM13O60858 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM13O60858 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM13O60858 USP9YP4-201ENST00000424401 1745 ntBASIC4.79□□□□□ -1.64
TRIM13O60858 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
TRIM13O60858 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM13O60858 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.79□□□□□ -1.64
TRIM13O60858 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM13O60858 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM13O60858 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.79□□□□□ -1.64
TRIM13O60858 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM13O60858 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
TRIM13O60858 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
TRIM13O60858 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM13O60858 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM13O60858 AC032011.1-201ENST00000611703 1549 ntBASIC4.78□□□□□ -1.64
TRIM13O60858 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM13O60858 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
TRIM13O60858 RNY1P12-201ENST00000364251 105 ntBASIC4.78□□□□□ -1.64
TRIM13O60858 Y_RNA.530-201ENST00000384587 101 ntBASIC4.78□□□□□ -1.64
TRIM13O60858 AL357515.1-201ENST00000402967 542 ntBASIC4.78□□□□□ -1.64
TRIM13O60858 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.78□□□□□ -1.64
TRIM13O60858 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.78□□□□□ -1.64
TRIM13O60858 AC119618.1-201ENST00000434191 222 ntBASIC4.78□□□□□ -1.64
TRIM13O60858 AL451139.1-201ENST00000434718 346 ntBASIC4.78□□□□□ -1.64
TRIM13O60858 HMGB1P12-201ENST00000438594 598 ntBASIC4.78□□□□□ -1.64
TRIM13O60858 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.78□□□□□ -1.64
TRIM13O60858 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.78□□□□□ -1.64
TRIM13O60858 TDGF1P1-201ENST00000445734 527 ntBASIC4.78□□□□□ -1.64
TRIM13O60858 RPL21P23-201ENST00000446654 460 ntBASIC4.78□□□□□ -1.64
TRIM13O60858 AC000111.2-201ENST00000448200 210 ntBASIC4.78□□□□□ -1.64
TRIM13O60858 AC104308.1-201ENST00000454621 333 ntBASIC4.78□□□□□ -1.64
TRIM13O60858 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.78□□□□□ -1.64
TRIM13O60858 RPL12P25-201ENST00000455592 494 ntBASIC4.78□□□□□ -1.64
TRIM13O60858 RPL30P15-201ENST00000457129 321 ntBASIC4.78□□□□□ -1.64
TRIM13O60858 MIR2053-201ENST00000459295 91 ntBASIC4.78□□□□□ -1.64
TRIM13O60858 TRBV1-201ENST00000476502 284 ntBASIC4.78□□□□□ -1.64
TRIM13O60858 RN7SL717P-201ENST00000478343 297 ntBASIC4.78□□□□□ -1.64
TRIM13O60858 RPL21P99-201ENST00000480369 423 ntBASIC4.78□□□□□ -1.64
TRIM13O60858 AC068781.1-201ENST00000488231 618 ntBASIC4.78□□□□□ -1.64
TRIM13O60858 RN7SL244P-201ENST00000493405 297 ntBASIC4.78□□□□□ -1.64
TRIM13O60858 AL136038.1-201ENST00000497246 351 ntBASIC4.78□□□□□ -1.64
TRIM13O60858 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.78□□□□□ -1.64
TRIM13O60858 LIAS-206ENST00000513731 826 ntTSL 5 BASIC4.78□□□□□ -1.64
TRIM13O60858 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM13O60858 RNA5SP92-201ENST00000516437 110 ntBASIC4.78□□□□□ -1.64
TRIM13O60858 RNU6-410P-201ENST00000517006 107 ntBASIC4.78□□□□□ -1.64
TRIM13O60858 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM13O60858 AP000889.1-201ENST00000530968 660 ntBASIC4.78□□□□□ -1.64
TRIM13O60858 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM13O60858 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.78□□□□□ -1.64
TRIM13O60858 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.78□□□□□ -1.64
TRIM13O60858 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM13O60858 SNORD95-201ENST00000579879 68 ntBASIC4.78□□□□□ -1.64
TRIM13O60858 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.78□□□□□ -1.64
TRIM13O60858 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM13O60858 MIR3942-201ENST00000585264 109 ntBASIC4.78□□□□□ -1.64
TRIM13O60858 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.78□□□□□ -1.64
TRIM13O60858 AC098848.2-201ENST00000588023 330 ntBASIC4.78□□□□□ -1.64
TRIM13O60858 FKBP1AP1-201ENST00000594588 318 ntBASIC4.78□□□□□ -1.64
TRIM13O60858 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM13O60858 AC100812.1-201ENST00000607622 580 ntBASIC4.78□□□□□ -1.64
TRIM13O60858 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM13O60858 uc_338.11-201ENST00000619132 160 ntBASIC4.78□□□□□ -1.64
TRIM13O60858 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
TRIM13O60858 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM13O60858 AL445487.1-201ENST00000415694 1580 ntBASIC4.78□□□□□ -1.64
TRIM13O60858 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.77□□□□□ -1.65
TRIM13O60858 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM13O60858 AC093775.1-201ENST00000624154 1868 ntBASIC4.77□□□□□ -1.65
TRIM13O60858 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM13O60858 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
TRIM13O60858 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.77□□□□□ -1.65
TRIM13O60858 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM13O60858 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.77□□□□□ -1.65
TRIM13O60858 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms