Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.31□□□□□ -1.72
PROM1O43490 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.31□□□□□ -1.72
PROM1O43490 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
PROM1O43490 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PROM1O43490 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PROM1O43490 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.3□□□□□ -1.72
PROM1O43490 NOL8P1-201ENST00000508336 3529 ntBASIC4.3□□□□□ -1.72
PROM1O43490 AC008033.1-201ENST00000216407 1162 ntBASIC4.3□□□□□ -1.72
PROM1O43490 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
PROM1O43490 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
PROM1O43490 AL161781.1-201ENST00000354277 403 ntBASIC4.3□□□□□ -1.72
PROM1O43490 Y_RNA.61-201ENST00000362835 102 ntBASIC4.3□□□□□ -1.72
PROM1O43490 RN7SKP227-201ENST00000364445 330 ntBASIC4.3□□□□□ -1.72
PROM1O43490 RNA5SP479-201ENST00000364858 117 ntBASIC4.3□□□□□ -1.72
PROM1O43490 RNU6-356P-201ENST00000384140 107 ntBASIC4.3□□□□□ -1.72
PROM1O43490 RNU6-1226P-201ENST00000384317 107 ntBASIC4.3□□□□□ -1.72
PROM1O43490 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.3□□□□□ -1.72
PROM1O43490 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PROM1O43490 RNA5SP239-201ENST00000410218 129 ntBASIC4.3□□□□□ -1.72
PROM1O43490 JKAMPP1-201ENST00000413804 919 ntBASIC4.3□□□□□ -1.72
PROM1O43490 OR51A5P-201ENST00000415429 942 ntBASIC4.3□□□□□ -1.72
PROM1O43490 AC016831.2-201ENST00000417179 352 ntBASIC4.3□□□□□ -1.72
PROM1O43490 RPL36AP36-201ENST00000418616 301 ntBASIC4.3□□□□□ -1.72
PROM1O43490 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.3□□□□□ -1.72
PROM1O43490 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC4.3□□□□□ -1.72
PROM1O43490 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.3□□□□□ -1.72
PROM1O43490 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.3□□□□□ -1.72
PROM1O43490 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.3□□□□□ -1.72
PROM1O43490 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.3□□□□□ -1.72
PROM1O43490 AL136126.1-201ENST00000473603 402 ntBASIC4.3□□□□□ -1.72
PROM1O43490 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.3□□□□□ -1.72
PROM1O43490 AC108022.1-201ENST00000493466 478 ntBASIC4.3□□□□□ -1.72
PROM1O43490 AK3P4-201ENST00000504283 583 ntBASIC4.3□□□□□ -1.72
PROM1O43490 AC114967.1-201ENST00000504890 259 ntBASIC4.3□□□□□ -1.72
PROM1O43490 AC018710.1-201ENST00000506509 158 ntBASIC4.3□□□□□ -1.72
PROM1O43490 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.3□□□□□ -1.72
PROM1O43490 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.3□□□□□ -1.72
PROM1O43490 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.3□□□□□ -1.72
PROM1O43490 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.3□□□□□ -1.72
PROM1O43490 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.3□□□□□ -1.72
PROM1O43490 RNU6-875P-201ENST00000516488 106 ntBASIC4.3□□□□□ -1.72
PROM1O43490 RNU6-201P-201ENST00000517100 61 ntBASIC4.3□□□□□ -1.72
PROM1O43490 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.3□□□□□ -1.72
PROM1O43490 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.3□□□□□ -1.72
PROM1O43490 AC123904.2-201ENST00000548059 300 ntBASIC4.3□□□□□ -1.72
PROM1O43490 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.3□□□□□ -1.72
PROM1O43490 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.3□□□□□ -1.72
PROM1O43490 MIR4277-201ENST00000578298 84 ntBASIC4.3□□□□□ -1.72
PROM1O43490 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PROM1O43490 NRBF2P5-201ENST00000603087 788 ntBASIC4.3□□□□□ -1.72
PROM1O43490 AC009159.1-201ENST00000618386 642 ntBASIC4.3□□□□□ -1.72
PROM1O43490 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
PROM1O43490 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PROM1O43490 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
PROM1O43490 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.3□□□□□ -1.72
PROM1O43490 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
PROM1O43490 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
PROM1O43490 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
PROM1O43490 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PROM1O43490 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
PROM1O43490 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.3□□□□□ -1.72
PROM1O43490 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.3□□□□□ -1.72
PROM1O43490 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.3□□□□□ -1.72
PROM1O43490 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
PROM1O43490 AL356489.2-201ENST00000566968 3528 ntBASIC4.3□□□□□ -1.72
PROM1O43490 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PROM1O43490 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PROM1O43490 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.3□□□□□ -1.72
PROM1O43490 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PROM1O43490 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.29□□□□□ -1.72
PROM1O43490 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
PROM1O43490 RNA5SP151-201ENST00000365632 117 ntBASIC4.29□□□□□ -1.72
PROM1O43490 RNU6-730P-201ENST00000383954 104 ntBASIC4.29□□□□□ -1.72
PROM1O43490 RPL23AP32-201ENST00000395315 459 ntBASIC4.29□□□□□ -1.72
PROM1O43490 SSXP10-201ENST00000402595 565 ntBASIC4.29□□□□□ -1.72
PROM1O43490 AL356421.1-201ENST00000403255 413 ntBASIC4.29□□□□□ -1.72
PROM1O43490 MTND3P17-201ENST00000416968 344 ntBASIC4.29□□□□□ -1.72
PROM1O43490 HMGB3P20-201ENST00000417997 600 ntBASIC4.29□□□□□ -1.72
PROM1O43490 RPL21P111-201ENST00000418453 477 ntBASIC4.29□□□□□ -1.72
PROM1O43490 ZNF90P2-204ENST00000419323 1075 ntBASIC4.29□□□□□ -1.72
PROM1O43490 AC019097.1-201ENST00000424783 735 ntBASIC4.29□□□□□ -1.72
PROM1O43490 AL353777.1-201ENST00000425552 326 ntBASIC4.29□□□□□ -1.72
PROM1O43490 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC4.29□□□□□ -1.72
PROM1O43490 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.29□□□□□ -1.72
PROM1O43490 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.29□□□□□ -1.72
PROM1O43490 HMGB3P12-201ENST00000438745 556 ntBASIC4.29□□□□□ -1.72
PROM1O43490 RPL23AP93-201ENST00000440847 484 ntBASIC4.29□□□□□ -1.72
PROM1O43490 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC4.29□□□□□ -1.72
PROM1O43490 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.29□□□□□ -1.72
PROM1O43490 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.29□□□□□ -1.72
PROM1O43490 AC092001.1-201ENST00000453012 261 ntBASIC4.29□□□□□ -1.72
PROM1O43490 HMGB1P15-201ENST00000453854 435 ntBASIC4.29□□□□□ -1.72
PROM1O43490 AP000852.1-201ENST00000472460 573 ntBASIC4.29□□□□□ -1.72
PROM1O43490 AC025445.1-201ENST00000502728 300 ntBASIC4.29□□□□□ -1.72
PROM1O43490 RNF138P1-201ENST00000502765 546 ntBASIC4.29□□□□□ -1.72
PROM1O43490 AC093767.1-201ENST00000504523 156 ntBASIC4.29□□□□□ -1.72
PROM1O43490 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.29□□□□□ -1.72
PROM1O43490 AC114786.4-201ENST00000508771 728 ntBASIC4.29□□□□□ -1.72
PROM1O43490 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC4.29□□□□□ -1.72
PROM1O43490 LRRC34P2-201ENST00000514850 553 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms