Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.62□□□□□ -1.83
SMAD9O15198 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.62□□□□□ -1.83
SMAD9O15198 HMGB3P15-201ENST00000507326 574 ntBASIC3.62□□□□□ -1.83
SMAD9O15198 AC105313.1-201ENST00000509121 353 ntBASIC3.62□□□□□ -1.83
SMAD9O15198 AC004062.1-201ENST00000509926 645 ntBASIC3.62□□□□□ -1.83
SMAD9O15198 AC017037.2-201ENST00000513850 890 ntBASIC3.62□□□□□ -1.83
SMAD9O15198 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.62□□□□□ -1.83
SMAD9O15198 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.62□□□□□ -1.83
SMAD9O15198 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.62□□□□□ -1.83
SMAD9O15198 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.62□□□□□ -1.83
SMAD9O15198 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.62□□□□□ -1.83
SMAD9O15198 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.62□□□□□ -1.83
SMAD9O15198 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.62□□□□□ -1.83
SMAD9O15198 MIR4307-201ENST00000582802 84 ntBASIC3.62□□□□□ -1.83
SMAD9O15198 SNORD84-203ENST00000584275 78 ntBASIC3.62□□□□□ -1.83
SMAD9O15198 AC008507.1-201ENST00000587506 734 ntBASIC3.62□□□□□ -1.83
SMAD9O15198 AP000403.1-201ENST00000603349 851 ntBASIC3.62□□□□□ -1.83
SMAD9O15198 AC011451.2-201ENST00000604303 598 ntBASIC3.62□□□□□ -1.83
SMAD9O15198 AC091965.4-201ENST00000607691 587 ntBASIC3.62□□□□□ -1.83
SMAD9O15198 AL391497.1-201ENST00000608671 547 ntBASIC3.62□□□□□ -1.83
SMAD9O15198 AC012360.2-201ENST00000609349 391 ntBASIC3.62□□□□□ -1.83
SMAD9O15198 MIR6868-201ENST00000611215 58 ntBASIC3.62□□□□□ -1.83
SMAD9O15198 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.62□□□□□ -1.83
SMAD9O15198 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SMAD9O15198 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SMAD9O15198 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SMAD9O15198 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
SMAD9O15198 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SMAD9O15198 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SMAD9O15198 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SMAD9O15198 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.61□□□□□ -1.83
SMAD9O15198 AC004925.1-201ENST00000624256 2706 ntBASIC3.61□□□□□ -1.83
SMAD9O15198 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
SMAD9O15198 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SMAD9O15198 MIR372-201ENST00000362225 67 ntBASIC3.61□□□□□ -1.83
SMAD9O15198 Y_RNA.97-201ENST00000363094 102 ntBASIC3.61□□□□□ -1.83
SMAD9O15198 RN7SKP280-201ENST00000364196 304 ntBASIC3.61□□□□□ -1.83
SMAD9O15198 SNORA51.2-201ENST00000364595 132 ntBASIC3.61□□□□□ -1.83
SMAD9O15198 RNU6-359P-201ENST00000365466 108 ntBASIC3.61□□□□□ -1.83
SMAD9O15198 U1.1-201ENST00000384101 164 ntBASIC3.61□□□□□ -1.83
SMAD9O15198 SNORD3H-201ENST00000384486 214 ntBASIC3.61□□□□□ -1.83
SMAD9O15198 PTMAP5-201ENST00000393073 333 ntBASIC3.61□□□□□ -1.83
SMAD9O15198 RNU4-6P-201ENST00000410804 122 ntBASIC3.61□□□□□ -1.83
SMAD9O15198 AC079780.1-201ENST00000428259 207 ntBASIC3.61□□□□□ -1.83
SMAD9O15198 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.61□□□□□ -1.83
SMAD9O15198 AC098826.1-201ENST00000433943 471 ntBASIC3.61□□□□□ -1.83
SMAD9O15198 VDAC1P3-201ENST00000434069 851 ntBASIC3.61□□□□□ -1.83
SMAD9O15198 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.61□□□□□ -1.83
SMAD9O15198 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.61□□□□□ -1.83
SMAD9O15198 AC112653.1-201ENST00000443851 386 ntBASIC3.61□□□□□ -1.83
SMAD9O15198 FAM103A2P-201ENST00000444122 354 ntBASIC3.61□□□□□ -1.83
SMAD9O15198 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.61□□□□□ -1.83
SMAD9O15198 AC009961.3-201ENST00000449832 765 ntBASIC3.61□□□□□ -1.83
SMAD9O15198 HMGB3P22-202ENST00000451823 572 ntBASIC3.61□□□□□ -1.83
SMAD9O15198 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.61□□□□□ -1.83
SMAD9O15198 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.61□□□□□ -1.83
SMAD9O15198 AL132838.2-201ENST00000492041 314 ntBASIC3.61□□□□□ -1.83
SMAD9O15198 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.61□□□□□ -1.83
SMAD9O15198 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.61□□□□□ -1.83
SMAD9O15198 AF131216.2-201ENST00000512316 564 ntBASIC3.61□□□□□ -1.83
SMAD9O15198 AC117532.1-201ENST00000514638 323 ntBASIC3.61□□□□□ -1.83
SMAD9O15198 AC023632.4-201ENST00000517783 191 ntBASIC3.61□□□□□ -1.83
SMAD9O15198 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.61□□□□□ -1.83
SMAD9O15198 HIGD1AP10-201ENST00000527837 282 ntBASIC3.61□□□□□ -1.83
SMAD9O15198 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.61□□□□□ -1.83
SMAD9O15198 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.61□□□□□ -1.83
SMAD9O15198 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.61□□□□□ -1.83
SMAD9O15198 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.61□□□□□ -1.83
SMAD9O15198 ACTR3BP3-201ENST00000565577 979 ntBASIC3.61□□□□□ -1.83
SMAD9O15198 AC091489.2-201ENST00000566263 604 ntBASIC3.61□□□□□ -1.83
SMAD9O15198 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.61□□□□□ -1.83
SMAD9O15198 MIR3690-201ENST00000580266 75 ntBASIC3.61□□□□□ -1.83
SMAD9O15198 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.61□□□□□ -1.83
SMAD9O15198 U73023.1-201ENST00000603134 700 ntBASIC3.61□□□□□ -1.83
SMAD9O15198 AC104662.1-201ENST00000604448 511 ntBASIC3.61□□□□□ -1.83
SMAD9O15198 AC092354.2-201ENST00000607786 514 ntBASIC3.61□□□□□ -1.83
SMAD9O15198 AC090425.2-201ENST00000608818 501 ntBASIC3.61□□□□□ -1.83
SMAD9O15198 TUG1_1.1-201ENST00000610654 145 ntBASIC3.61□□□□□ -1.83
SMAD9O15198 AL359715.5-201ENST00000623431 443 ntBASIC3.61□□□□□ -1.83
SMAD9O15198 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SMAD9O15198 AC093591.3-201ENST00000634516 308 ntBASIC3.61□□□□□ -1.83
SMAD9O15198 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SMAD9O15198 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SMAD9O15198 AL365440.1-201ENST00000436135 2167 ntBASIC3.61□□□□□ -1.83
SMAD9O15198 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.6□□□□□ -1.83
SMAD9O15198 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.6□□□□□ -1.83
SMAD9O15198 AC006504.1-201ENST00000562493 3666 ntBASIC3.6□□□□□ -1.83
SMAD9O15198 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.6□□□□□ -1.83
SMAD9O15198 RNU4-40P-201ENST00000364351 143 ntBASIC3.6□□□□□ -1.83
SMAD9O15198 RNU6-1074P-201ENST00000383995 104 ntBASIC3.6□□□□□ -1.83
SMAD9O15198 Y_RNA.548-201ENST00000384656 105 ntBASIC3.6□□□□□ -1.83
SMAD9O15198 RNU6-328P-201ENST00000390887 106 ntBASIC3.6□□□□□ -1.83
SMAD9O15198 CRYBB2P1-203ENST00000415709 538 ntBASIC3.6□□□□□ -1.83
SMAD9O15198 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.6□□□□□ -1.83
SMAD9O15198 AC099677.1-201ENST00000420575 175 ntBASIC3.6□□□□□ -1.83
SMAD9O15198 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.6□□□□□ -1.83
SMAD9O15198 OR8F1P-201ENST00000425243 930 ntBASIC3.6□□□□□ -1.83
SMAD9O15198 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SMAD9O15198 AL691449.1-201ENST00000426570 421 ntBASIC3.6□□□□□ -1.83
SMAD9O15198 RPL7P2-201ENST00000427639 268 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms