Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.38□□□□□ -1.71
FOXN3O00409 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.38□□□□□ -1.71
FOXN3O00409 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.38□□□□□ -1.71
FOXN3O00409 SNRPFP4-201ENST00000456366 242 ntBASIC4.38□□□□□ -1.71
FOXN3O00409 snoU109.1-201ENST00000459339 135 ntBASIC4.38□□□□□ -1.71
FOXN3O00409 ACTR3P3-201ENST00000480448 893 ntBASIC4.38□□□□□ -1.71
FOXN3O00409 AP001086.1-201ENST00000494882 321 ntBASIC4.38□□□□□ -1.71
FOXN3O00409 AL139099.1-201ENST00000497398 403 ntBASIC4.38□□□□□ -1.71
FOXN3O00409 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
FOXN3O00409 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.38□□□□□ -1.71
FOXN3O00409 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
FOXN3O00409 SNORA70.14-201ENST00000516205 110 ntBASIC4.38□□□□□ -1.71
FOXN3O00409 MTND1P5-201ENST00000517906 940 ntBASIC4.38□□□□□ -1.71
FOXN3O00409 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.38□□□□□ -1.71
FOXN3O00409 AP004371.1-201ENST00000525240 214 ntBASIC4.38□□□□□ -1.71
FOXN3O00409 AP003497.1-201ENST00000528472 562 ntBASIC4.38□□□□□ -1.71
FOXN3O00409 AP004242.1-201ENST00000533701 349 ntBASIC4.38□□□□□ -1.71
FOXN3O00409 CYCSP29-201ENST00000533731 318 ntBASIC4.38□□□□□ -1.71
FOXN3O00409 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
FOXN3O00409 AC123904.2-201ENST00000548059 300 ntBASIC4.38□□□□□ -1.71
FOXN3O00409 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.38□□□□□ -1.71
FOXN3O00409 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.38□□□□□ -1.71
FOXN3O00409 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.38□□□□□ -1.71
FOXN3O00409 AL121603.1-201ENST00000553815 142 ntBASIC4.38□□□□□ -1.71
FOXN3O00409 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.38□□□□□ -1.71
FOXN3O00409 AC009977.1-201ENST00000586015 570 ntBASIC4.38□□□□□ -1.71
FOXN3O00409 UBE2L4-201ENST00000587688 464 ntBASIC4.38□□□□□ -1.71
FOXN3O00409 AL139395.1-201ENST00000603662 160 ntBASIC4.38□□□□□ -1.71
FOXN3O00409 AC104662.1-201ENST00000604448 511 ntBASIC4.38□□□□□ -1.71
FOXN3O00409 TUG1_1.1-201ENST00000610654 145 ntBASIC4.38□□□□□ -1.71
FOXN3O00409 AL445567.2-201ENST00000618935 498 ntBASIC4.38□□□□□ -1.71
FOXN3O00409 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.38□□□□□ -1.71
FOXN3O00409 AL590240.3-201ENST00000621416 943 ntBASIC4.38□□□□□ -1.71
FOXN3O00409 AL158801.5-201ENST00000623123 465 ntBASIC4.38□□□□□ -1.71
FOXN3O00409 AL603839.4-201ENST00000624658 1005 ntBASIC4.38□□□□□ -1.71
FOXN3O00409 AC110994.2-201ENST00000635481 492 ntBASIC4.38□□□□□ -1.71
FOXN3O00409 AL773545.4-201ENST00000637262 310 ntBASIC4.38□□□□□ -1.71
FOXN3O00409 AL513478.4-201ENST00000641636 310 ntBASIC4.38□□□□□ -1.71
FOXN3O00409 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.38□□□□□ -1.71
FOXN3O00409 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
FOXN3O00409 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.38□□□□□ -1.71
FOXN3O00409 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.38□□□□□ -1.71
FOXN3O00409 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
FOXN3O00409 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
FOXN3O00409 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
FOXN3O00409 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
FOXN3O00409 MAPK10-372ENST00000641954 3413 ntBASIC4.38□□□□□ -1.71
FOXN3O00409 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
FOXN3O00409 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
FOXN3O00409 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
FOXN3O00409 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
FOXN3O00409 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.38□□□□□ -1.71
FOXN3O00409 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.37□□□□□ -1.71
FOXN3O00409 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
FOXN3O00409 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.37□□□□□ -1.71
FOXN3O00409 Y_RNA.3-201ENST00000362331 103 ntBASIC4.37□□□□□ -1.71
FOXN3O00409 RNY4P34-201ENST00000364779 95 ntBASIC4.37□□□□□ -1.71
FOXN3O00409 RNU6-1119P-201ENST00000384349 108 ntBASIC4.37□□□□□ -1.71
FOXN3O00409 RNU6-517P-201ENST00000384362 110 ntBASIC4.37□□□□□ -1.71
FOXN3O00409 RNU6-297P-201ENST00000384636 107 ntBASIC4.37□□□□□ -1.71
FOXN3O00409 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
FOXN3O00409 AC078974.1-201ENST00000411597 223 ntBASIC4.37□□□□□ -1.71
FOXN3O00409 AC007899.1-201ENST00000412776 775 ntBASIC4.37□□□□□ -1.71
FOXN3O00409 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
FOXN3O00409 UBE2V1P10-201ENST00000414685 269 ntBASIC4.37□□□□□ -1.71
FOXN3O00409 AC004552.1-201ENST00000419089 348 ntBASIC4.37□□□□□ -1.71
FOXN3O00409 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.37□□□□□ -1.71
FOXN3O00409 AC069285.2-201ENST00000440210 275 ntBASIC4.37□□□□□ -1.71
FOXN3O00409 HMGN2P21-201ENST00000447764 270 ntBASIC4.37□□□□□ -1.71
FOXN3O00409 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.37□□□□□ -1.71
FOXN3O00409 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC4.37□□□□□ -1.71
FOXN3O00409 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
FOXN3O00409 HMGN2P7-201ENST00000456186 273 ntBASIC4.37□□□□□ -1.71
FOXN3O00409 RPS26P3-201ENST00000470205 348 ntBASIC4.37□□□□□ -1.71
FOXN3O00409 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.37□□□□□ -1.71
FOXN3O00409 AC092451.1-201ENST00000480211 153 ntBASIC4.37□□□□□ -1.71
FOXN3O00409 AC090543.2-201ENST00000483963 348 ntBASIC4.37□□□□□ -1.71
FOXN3O00409 AC004057.1-201ENST00000485827 348 ntBASIC4.37□□□□□ -1.71
FOXN3O00409 RPL31P61-201ENST00000496160 376 ntBASIC4.37□□□□□ -1.71
FOXN3O00409 AC025445.1-201ENST00000502728 300 ntBASIC4.37□□□□□ -1.71
FOXN3O00409 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.37□□□□□ -1.71
FOXN3O00409 AC010460.1-201ENST00000507087 466 ntBASIC4.37□□□□□ -1.71
FOXN3O00409 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.37□□□□□ -1.71
FOXN3O00409 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
FOXN3O00409 RNU6-528P-201ENST00000516926 100 ntBASIC4.37□□□□□ -1.71
FOXN3O00409 RNU6-1003P-201ENST00000517099 105 ntBASIC4.37□□□□□ -1.71
FOXN3O00409 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.37□□□□□ -1.71
FOXN3O00409 AC134698.4-201ENST00000523451 826 ntBASIC4.37□□□□□ -1.71
FOXN3O00409 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.37□□□□□ -1.71
FOXN3O00409 AP003392.2-201ENST00000527269 208 ntBASIC4.37□□□□□ -1.71
FOXN3O00409 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.37□□□□□ -1.71
FOXN3O00409 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.37□□□□□ -1.71
FOXN3O00409 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.37□□□□□ -1.71
FOXN3O00409 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
FOXN3O00409 AC009101.1-201ENST00000568135 242 ntBASIC4.37□□□□□ -1.71
FOXN3O00409 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.37□□□□□ -1.71
FOXN3O00409 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.37□□□□□ -1.71
FOXN3O00409 IPO5P1-202ENST00000600039 287 ntBASIC4.37□□□□□ -1.71
FOXN3O00409 AL359999.1-201ENST00000604513 294 ntBASIC4.37□□□□□ -1.71
FOXN3O00409 AC131902.3-201ENST00000611767 581 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms