Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
TRIM49BA6NDI0 AL513175.2-201ENST00000422071 443 ntBASIC3.47□□□□□ -1.85
TRIM49BA6NDI0 RPF2P1-201ENST00000424137 906 ntBASIC3.47□□□□□ -1.85
TRIM49BA6NDI0 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.47□□□□□ -1.85
TRIM49BA6NDI0 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.47□□□□□ -1.85
TRIM49BA6NDI0 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.47□□□□□ -1.85
TRIM49BA6NDI0 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
TRIM49BA6NDI0 AL589880.1-201ENST00000448271 287 ntBASIC3.47□□□□□ -1.85
TRIM49BA6NDI0 SLC31A1P1-201ENST00000451221 567 ntBASIC3.47□□□□□ -1.85
TRIM49BA6NDI0 NECAP1P2-201ENST00000455668 727 ntBASIC3.47□□□□□ -1.85
TRIM49BA6NDI0 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.47□□□□□ -1.85
TRIM49BA6NDI0 RNU7-170P-201ENST00000459303 61 ntBASIC3.47□□□□□ -1.85
TRIM49BA6NDI0 AL049830.2-201ENST00000480072 201 ntBASIC3.47□□□□□ -1.85
TRIM49BA6NDI0 VPS26AP1-201ENST00000483197 979 ntBASIC3.47□□□□□ -1.85
TRIM49BA6NDI0 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
TRIM49BA6NDI0 AC093278.1-201ENST00000494700 600 ntBASIC3.47□□□□□ -1.85
TRIM49BA6NDI0 RNU1-61P-201ENST00000516107 151 ntBASIC3.47□□□□□ -1.85
TRIM49BA6NDI0 LRRC6P1-201ENST00000532188 885 ntBASIC3.47□□□□□ -1.85
TRIM49BA6NDI0 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.47□□□□□ -1.85
TRIM49BA6NDI0 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.47□□□□□ -1.85
TRIM49BA6NDI0 AC011611.1-201ENST00000552179 197 ntBASIC3.47□□□□□ -1.85
TRIM49BA6NDI0 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.47□□□□□ -1.85
TRIM49BA6NDI0 NCAPGP2-201ENST00000557911 754 ntBASIC3.47□□□□□ -1.85
TRIM49BA6NDI0 AC009097.3-201ENST00000563557 1018 ntBASIC3.47□□□□□ -1.85
TRIM49BA6NDI0 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.47□□□□□ -1.85
TRIM49BA6NDI0 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.47□□□□□ -1.85
TRIM49BA6NDI0 AP001029.3-201ENST00000588063 596 ntBASIC3.47□□□□□ -1.85
TRIM49BA6NDI0 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
TRIM49BA6NDI0 PRELID3BP8-201ENST00000604148 295 ntBASIC3.47□□□□□ -1.85
TRIM49BA6NDI0 AC007179.3-201ENST00000604976 235 ntBASIC3.47□□□□□ -1.85
TRIM49BA6NDI0 VIS1.1-201ENST00000610517 203 ntBASIC3.47□□□□□ -1.85
TRIM49BA6NDI0 PLCE1P1-201ENST00000622094 305 ntBASIC3.47□□□□□ -1.85
TRIM49BA6NDI0 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.47□□□□□ -1.85
TRIM49BA6NDI0 ZNF663P-202ENST00000641770 1131 ntBASIC3.47□□□□□ -1.85
TRIM49BA6NDI0 LINC02211-204ENST00000642024 1070 ntBASIC3.47□□□□□ -1.85
TRIM49BA6NDI0 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
TRIM49BA6NDI0 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.47□□□□□ -1.85
TRIM49BA6NDI0 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
TRIM49BA6NDI0 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.47□□□□□ -1.85
TRIM49BA6NDI0 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
TRIM49BA6NDI0 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.46□□□□□ -1.85
TRIM49BA6NDI0 AC002546.1-201ENST00000588041 2504 ntBASIC3.46□□□□□ -1.85
TRIM49BA6NDI0 AL136164.4-201ENST00000625013 2135 ntBASIC3.46□□□□□ -1.86
TRIM49BA6NDI0 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
TRIM49BA6NDI0 RNU4-65P-201ENST00000410473 140 ntBASIC3.46□□□□□ -1.86
TRIM49BA6NDI0 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.46□□□□□ -1.86
TRIM49BA6NDI0 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.46□□□□□ -1.86
TRIM49BA6NDI0 AL008987.1-201ENST00000415528 237 ntBASIC3.46□□□□□ -1.86
TRIM49BA6NDI0 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.46□□□□□ -1.86
TRIM49BA6NDI0 USP9YP31-201ENST00000431405 881 ntBASIC3.46□□□□□ -1.86
TRIM49BA6NDI0 NEK4P1-201ENST00000433383 879 ntBASIC3.46□□□□□ -1.86
TRIM49BA6NDI0 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.46□□□□□ -1.86
TRIM49BA6NDI0 AC127537.2-201ENST00000439258 465 ntBASIC3.46□□□□□ -1.86
TRIM49BA6NDI0 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.46□□□□□ -1.86
TRIM49BA6NDI0 SNORD11.1-201ENST00000459482 85 ntBASIC3.46□□□□□ -1.86
TRIM49BA6NDI0 AC079203.1-201ENST00000487972 404 ntBASIC3.46□□□□□ -1.86
TRIM49BA6NDI0 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.46□□□□□ -1.86
TRIM49BA6NDI0 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.46□□□□□ -1.86
TRIM49BA6NDI0 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.46□□□□□ -1.86
TRIM49BA6NDI0 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.46□□□□□ -1.86
TRIM49BA6NDI0 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.46□□□□□ -1.86
TRIM49BA6NDI0 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.46□□□□□ -1.86
TRIM49BA6NDI0 AC023632.1-201ENST00000518463 375 ntBASIC3.46□□□□□ -1.86
TRIM49BA6NDI0 AP000790.1-201ENST00000528891 737 ntBASIC3.46□□□□□ -1.86
TRIM49BA6NDI0 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.46□□□□□ -1.86
TRIM49BA6NDI0 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.46□□□□□ -1.86
TRIM49BA6NDI0 AC009712.1-201ENST00000564938 316 ntBASIC3.46□□□□□ -1.86
TRIM49BA6NDI0 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.46□□□□□ -1.86
TRIM49BA6NDI0 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.46□□□□□ -1.86
TRIM49BA6NDI0 AC008751.2-201ENST00000597885 980 ntBASIC3.46□□□□□ -1.86
TRIM49BA6NDI0 XIAPP1-201ENST00000603162 600 ntBASIC3.46□□□□□ -1.86
TRIM49BA6NDI0 AL161756.2-201ENST00000604597 246 ntBASIC3.46□□□□□ -1.86
TRIM49BA6NDI0 AL159169.3-201ENST00000608871 561 ntBASIC3.46□□□□□ -1.86
TRIM49BA6NDI0 AC006329.2-201ENST00000611491 394 ntBASIC3.46□□□□□ -1.86
TRIM49BA6NDI0 AL138478.1-201ENST00000612252 832 ntBASIC3.46□□□□□ -1.86
TRIM49BA6NDI0 AC009318.4-201ENST00000620496 486 ntBASIC3.46□□□□□ -1.86
TRIM49BA6NDI0 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TRIM49BA6NDI0 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
TRIM49BA6NDI0 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TRIM49BA6NDI0 AC244517.1-201ENST00000606030 2086 ntBASIC3.46□□□□□ -1.86
TRIM49BA6NDI0 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.46□□□□□ -1.86
TRIM49BA6NDI0 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.46□□□□□ -1.86
TRIM49BA6NDI0 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
TRIM49BA6NDI0 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
TRIM49BA6NDI0 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TRIM49BA6NDI0 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
TRIM49BA6NDI0 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.45□□□□□ -1.86
TRIM49BA6NDI0 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
TRIM49BA6NDI0 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
TRIM49BA6NDI0 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
TRIM49BA6NDI0 ANKRD36P1-201ENST00000344424 659 ntBASIC3.45□□□□□ -1.86
TRIM49BA6NDI0 RNU6-236P-201ENST00000363886 106 ntBASIC3.45□□□□□ -1.86
TRIM49BA6NDI0 snoZ40.1-201ENST00000364540 72 ntBASIC3.45□□□□□ -1.86
TRIM49BA6NDI0 SNORD82-201ENST00000365530 70 ntBASIC3.45□□□□□ -1.86
TRIM49BA6NDI0 SNORD116-23-201ENST00000384645 92 ntBASIC3.45□□□□□ -1.86
TRIM49BA6NDI0 SNORA46-201ENST00000384762 135 ntBASIC3.45□□□□□ -1.86
TRIM49BA6NDI0 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TRIM49BA6NDI0 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.45□□□□□ -1.86
TRIM49BA6NDI0 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.45□□□□□ -1.86
TRIM49BA6NDI0 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms