Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC78A2IDD5 Y_RNA.70-201ENST00000362886 110 ntBASIC4.46□□□□□ -1.7
CCDC78A2IDD5 RNA5SP28-201ENST00000363841 119 ntBASIC4.46□□□□□ -1.7
CCDC78A2IDD5 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CCDC78A2IDD5 AC016769.3-201ENST00000396562 315 ntBASIC4.46□□□□□ -1.7
CCDC78A2IDD5 SDHCP2-201ENST00000398565 501 ntBASIC4.46□□□□□ -1.7
CCDC78A2IDD5 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC78A2IDD5 SNRPEP10-201ENST00000420249 274 ntBASIC4.46□□□□□ -1.7
CCDC78A2IDD5 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC78A2IDD5 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC78A2IDD5 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC78A2IDD5 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.46□□□□□ -1.7
CCDC78A2IDD5 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC78A2IDD5 FABP3P2-201ENST00000453169 399 ntBASIC4.46□□□□□ -1.7
CCDC78A2IDD5 AC133473.1-201ENST00000455173 299 ntBASIC4.46□□□□□ -1.7
CCDC78A2IDD5 MTND1P12-201ENST00000455231 147 ntBASIC4.46□□□□□ -1.7
CCDC78A2IDD5 S100A11P1-201ENST00000477525 312 ntBASIC4.46□□□□□ -1.7
CCDC78A2IDD5 RPL23AP41-201ENST00000484754 458 ntBASIC4.46□□□□□ -1.7
CCDC78A2IDD5 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.46□□□□□ -1.7
CCDC78A2IDD5 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.46□□□□□ -1.7
CCDC78A2IDD5 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC78A2IDD5 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC78A2IDD5 HIGD1AP3-201ENST00000515857 278 ntBASIC4.46□□□□□ -1.7
CCDC78A2IDD5 Vault.3-201ENST00000516676 95 ntBASIC4.46□□□□□ -1.7
CCDC78A2IDD5 AP003072.2-201ENST00000527756 676 ntBASIC4.46□□□□□ -1.7
CCDC78A2IDD5 OR8L1P-201ENST00000534005 955 ntBASIC4.46□□□□□ -1.7
CCDC78A2IDD5 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.46□□□□□ -1.7
CCDC78A2IDD5 AC092470.1-201ENST00000546187 132 ntBASIC4.46□□□□□ -1.7
CCDC78A2IDD5 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CCDC78A2IDD5 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC78A2IDD5 AC005730.3-201ENST00000583067 366 ntBASIC4.46□□□□□ -1.7
CCDC78A2IDD5 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC78A2IDD5 RPL7P50-201ENST00000600588 727 ntBASIC4.46□□□□□ -1.7
CCDC78A2IDD5 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC78A2IDD5 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC78A2IDD5 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC78A2IDD5 AL161734.1-201ENST00000609720 557 ntBASIC4.46□□□□□ -1.7
CCDC78A2IDD5 AC104260.1-201ENST00000616660 539 ntBASIC4.46□□□□□ -1.7
CCDC78A2IDD5 AC009237.17-201ENST00000618111 748 ntBASIC4.46□□□□□ -1.7
CCDC78A2IDD5 AC009159.1-201ENST00000618386 642 ntBASIC4.46□□□□□ -1.7
CCDC78A2IDD5 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC78A2IDD5 AL592148.3-201ENST00000608771 2646 ntBASIC4.46□□□□□ -1.7
CCDC78A2IDD5 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
CCDC78A2IDD5 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC78A2IDD5 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.46□□□□□ -1.7
CCDC78A2IDD5 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC78A2IDD5 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC78A2IDD5 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
CCDC78A2IDD5 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC78A2IDD5 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC78A2IDD5 NMD3P1-201ENST00000439704 1488 ntBASIC4.45□□□□□ -1.7
CCDC78A2IDD5 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC78A2IDD5 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC78A2IDD5 AC067945.1-201ENST00000342609 618 ntBASIC4.45□□□□□ -1.7
CCDC78A2IDD5 RNU1-108P-201ENST00000362556 161 ntBASIC4.45□□□□□ -1.7
CCDC78A2IDD5 RNU1-130P-201ENST00000363930 160 ntBASIC4.45□□□□□ -1.7
CCDC78A2IDD5 RNU6-1322P-201ENST00000364309 107 ntBASIC4.45□□□□□ -1.7
CCDC78A2IDD5 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.45□□□□□ -1.7
CCDC78A2IDD5 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC78A2IDD5 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC78A2IDD5 RPL31P2-201ENST00000413849 377 ntBASIC4.45□□□□□ -1.7
CCDC78A2IDD5 AC009237.5-201ENST00000414271 501 ntBASIC4.45□□□□□ -1.7
CCDC78A2IDD5 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC78A2IDD5 HMGB3P20-201ENST00000417997 600 ntBASIC4.45□□□□□ -1.7
CCDC78A2IDD5 EIF4EP1-201ENST00000422311 642 ntBASIC4.45□□□□□ -1.7
CCDC78A2IDD5 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC78A2IDD5 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC78A2IDD5 NDUFS5P3-201ENST00000450668 321 ntBASIC4.45□□□□□ -1.7
CCDC78A2IDD5 RN7SL385P-201ENST00000468873 276 ntBASIC4.45□□□□□ -1.7
CCDC78A2IDD5 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC78A2IDD5 RPS29P25-201ENST00000481709 171 ntBASIC4.45□□□□□ -1.7
CCDC78A2IDD5 AC012158.1-204ENST00000483430 465 ntBASIC4.45□□□□□ -1.7
CCDC78A2IDD5 AC069439.1-201ENST00000494739 167 ntBASIC4.45□□□□□ -1.7
CCDC78A2IDD5 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC78A2IDD5 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC78A2IDD5 AC022616.6-201ENST00000520479 119 ntBASIC4.45□□□□□ -1.7
CCDC78A2IDD5 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC78A2IDD5 OR5BC1P-201ENST00000529327 739 ntBASIC4.45□□□□□ -1.7
CCDC78A2IDD5 AL359212.1-201ENST00000556608 614 ntBASIC4.45□□□□□ -1.7
CCDC78A2IDD5 AC099489.2-201ENST00000574976 260 ntBASIC4.45□□□□□ -1.7
CCDC78A2IDD5 UBE2V2P2-201ENST00000587677 504 ntBASIC4.45□□□□□ -1.7
CCDC78A2IDD5 AC068790.5-201ENST00000602741 355 ntBASIC4.45□□□□□ -1.7
CCDC78A2IDD5 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC78A2IDD5 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC78A2IDD5 OR10AB1P-201ENST00000609613 938 ntBASIC4.45□□□□□ -1.7
CCDC78A2IDD5 AL138721.1-201ENST00000616756 179 ntBASIC4.45□□□□□ -1.7
CCDC78A2IDD5 AP005019.3-201ENST00000620418 560 ntBASIC4.45□□□□□ -1.7
CCDC78A2IDD5 AC091905.1-201ENST00000624400 311 ntBASIC4.45□□□□□ -1.7
CCDC78A2IDD5 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
CCDC78A2IDD5 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC78A2IDD5 DHX40P1-201ENST00000588725 1412 ntBASIC4.45□□□□□ -1.7
CCDC78A2IDD5 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC78A2IDD5 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC78A2IDD5 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC78A2IDD5 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.44□□□□□ -1.7
CCDC78A2IDD5 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC78A2IDD5 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC78A2IDD5 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC78A2IDD5 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC78A2IDD5 RNA5SP502-201ENST00000362694 119 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms