Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
SMIM28A0A1B0GU29 RNU6-339P-201ENST00000384310 107 ntBASIC3.11□□□□□ -1.91
SMIM28A0A1B0GU29 Y_RNA.493-201ENST00000384422 102 ntBASIC3.11□□□□□ -1.91
SMIM28A0A1B0GU29 RNU6-328P-201ENST00000390887 106 ntBASIC3.11□□□□□ -1.91
SMIM28A0A1B0GU29 RPL23AP47-201ENST00000408017 460 ntBASIC3.11□□□□□ -1.91
SMIM28A0A1B0GU29 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.11□□□□□ -1.91
SMIM28A0A1B0GU29 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.11□□□□□ -1.91
SMIM28A0A1B0GU29 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.11□□□□□ -1.91
SMIM28A0A1B0GU29 OFD1P18Y-201ENST00000420889 959 ntBASIC3.11□□□□□ -1.91
SMIM28A0A1B0GU29 AL645937.1-202ENST00000421799 937 ntBASIC3.11□□□□□ -1.91
SMIM28A0A1B0GU29 MTCO3P1-205ENST00000422088 832 ntBASIC3.11□□□□□ -1.91
SMIM28A0A1B0GU29 DPRXP1-201ENST00000426312 460 ntBASIC3.11□□□□□ -1.91
SMIM28A0A1B0GU29 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.11□□□□□ -1.91
SMIM28A0A1B0GU29 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.11□□□□□ -1.91
SMIM28A0A1B0GU29 AC092393.1-201ENST00000439625 742 ntBASIC3.11□□□□□ -1.91
SMIM28A0A1B0GU29 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
SMIM28A0A1B0GU29 AL009048.1-201ENST00000450437 298 ntBASIC3.11□□□□□ -1.91
SMIM28A0A1B0GU29 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.11□□□□□ -1.91
SMIM28A0A1B0GU29 SNORA59A-201ENST00000459326 152 ntBASIC3.11□□□□□ -1.91
SMIM28A0A1B0GU29 AC114967.1-201ENST00000504890 259 ntBASIC3.11□□□□□ -1.91
SMIM28A0A1B0GU29 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.11□□□□□ -1.91
SMIM28A0A1B0GU29 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.11□□□□□ -1.91
SMIM28A0A1B0GU29 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SMIM28A0A1B0GU29 RN7SKP132-201ENST00000516001 208 ntBASIC3.11□□□□□ -1.91
SMIM28A0A1B0GU29 RN7SKP289-201ENST00000517244 295 ntBASIC3.11□□□□□ -1.91
SMIM28A0A1B0GU29 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.11□□□□□ -1.91
SMIM28A0A1B0GU29 ARL2BPP5-201ENST00000523141 481 ntBASIC3.11□□□□□ -1.91
SMIM28A0A1B0GU29 LRRC6P1-201ENST00000532188 885 ntBASIC3.11□□□□□ -1.91
SMIM28A0A1B0GU29 GTF3AP2-201ENST00000557014 266 ntBASIC3.11□□□□□ -1.91
SMIM28A0A1B0GU29 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.11□□□□□ -1.91
SMIM28A0A1B0GU29 SULT1C2P1-202ENST00000562418 459 ntBASIC3.11□□□□□ -1.91
SMIM28A0A1B0GU29 AC138915.2-201ENST00000569776 97 ntBASIC3.11□□□□□ -1.91
SMIM28A0A1B0GU29 LARP7P2-201ENST00000575306 125 ntBASIC3.11□□□□□ -1.91
SMIM28A0A1B0GU29 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SMIM28A0A1B0GU29 AC015688.2-201ENST00000584523 262 ntBASIC3.11□□□□□ -1.91
SMIM28A0A1B0GU29 ELOCP29-201ENST00000588193 334 ntBASIC3.11□□□□□ -1.91
SMIM28A0A1B0GU29 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.11□□□□□ -1.91
SMIM28A0A1B0GU29 AC245884.10-201ENST00000597355 337 ntBASIC3.11□□□□□ -1.91
SMIM28A0A1B0GU29 AC024153.1-201ENST00000603103 365 ntBASIC3.11□□□□□ -1.91
SMIM28A0A1B0GU29 AC090425.2-201ENST00000608818 501 ntBASIC3.11□□□□□ -1.91
SMIM28A0A1B0GU29 AC092954.1-201ENST00000609121 445 ntBASIC3.11□□□□□ -1.91
SMIM28A0A1B0GU29 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SMIM28A0A1B0GU29 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.11□□□□□ -1.91
SMIM28A0A1B0GU29 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
SMIM28A0A1B0GU29 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
SMIM28A0A1B0GU29 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SMIM28A0A1B0GU29 AC093908.1-201ENST00000623125 8092 ntBASIC3.1□□□□□ -1.91
SMIM28A0A1B0GU29 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SMIM28A0A1B0GU29 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.1□□□□□ -1.91
SMIM28A0A1B0GU29 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SMIM28A0A1B0GU29 SNORA5B-201ENST00000363786 132 ntBASIC3.1□□□□□ -1.91
SMIM28A0A1B0GU29 SNORD116-12-201ENST00000384468 92 ntBASIC3.1□□□□□ -1.91
SMIM28A0A1B0GU29 RNU6-1300P-201ENST00000391046 108 ntBASIC3.1□□□□□ -1.91
SMIM28A0A1B0GU29 RPL31P1-201ENST00000398116 372 ntBASIC3.1□□□□□ -1.91
SMIM28A0A1B0GU29 RNA5SP293-201ENST00000410527 113 ntBASIC3.1□□□□□ -1.91
SMIM28A0A1B0GU29 RNU4-22P-201ENST00000411058 166 ntBASIC3.1□□□□□ -1.91
SMIM28A0A1B0GU29 AL161449.1-201ENST00000414531 1199 ntBASIC3.1□□□□□ -1.91
SMIM28A0A1B0GU29 TOMM22P1-201ENST00000418578 312 ntBASIC3.1□□□□□ -1.91
SMIM28A0A1B0GU29 FNDC3CP-201ENST00000420795 1155 ntBASIC3.1□□□□□ -1.91
SMIM28A0A1B0GU29 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.1□□□□□ -1.91
SMIM28A0A1B0GU29 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SMIM28A0A1B0GU29 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.1□□□□□ -1.91
SMIM28A0A1B0GU29 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC3.1□□□□□ -1.91
SMIM28A0A1B0GU29 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.1□□□□□ -1.91
SMIM28A0A1B0GU29 SEPT7P5-201ENST00000434048 306 ntBASIC3.1□□□□□ -1.91
SMIM28A0A1B0GU29 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.1□□□□□ -1.91
SMIM28A0A1B0GU29 NANOGP2-201ENST00000435391 727 ntBASIC3.1□□□□□ -1.91
SMIM28A0A1B0GU29 UQCRHP3-201ENST00000451503 251 ntBASIC3.1□□□□□ -1.91
SMIM28A0A1B0GU29 MTCO3P2-201ENST00000457365 171 ntBASIC3.1□□□□□ -1.91
SMIM28A0A1B0GU29 PABPC1P3-201ENST00000469174 459 ntBASIC3.1□□□□□ -1.91
SMIM28A0A1B0GU29 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SMIM28A0A1B0GU29 AC069528.1-202ENST00000482888 637 ntBASIC3.1□□□□□ -1.91
SMIM28A0A1B0GU29 VPS26AP1-201ENST00000483197 979 ntBASIC3.1□□□□□ -1.91
SMIM28A0A1B0GU29 AC079203.1-201ENST00000487972 404 ntBASIC3.1□□□□□ -1.91
SMIM28A0A1B0GU29 AC093278.1-201ENST00000494700 600 ntBASIC3.1□□□□□ -1.91
SMIM28A0A1B0GU29 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.1□□□□□ -1.91
SMIM28A0A1B0GU29 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SMIM28A0A1B0GU29 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.1□□□□□ -1.91
SMIM28A0A1B0GU29 RN7SKP43-201ENST00000516173 320 ntBASIC3.1□□□□□ -1.91
SMIM28A0A1B0GU29 AC090136.1-201ENST00000520009 240 ntBASIC3.1□□□□□ -1.91
SMIM28A0A1B0GU29 OR10V3P-201ENST00000525712 725 ntBASIC3.1□□□□□ -1.91
SMIM28A0A1B0GU29 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SMIM28A0A1B0GU29 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.1□□□□□ -1.91
SMIM28A0A1B0GU29 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.1□□□□□ -1.91
SMIM28A0A1B0GU29 AC113368.1-201ENST00000603736 382 ntBASIC3.1□□□□□ -1.91
SMIM28A0A1B0GU29 MTND3P19-201ENST00000603825 345 ntBASIC3.1□□□□□ -1.91
SMIM28A0A1B0GU29 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.1□□□□□ -1.91
SMIM28A0A1B0GU29 AL157392.4-201ENST00000609756 345 ntBASIC3.1□□□□□ -1.91
SMIM28A0A1B0GU29 AC023158.2-201ENST00000614876 543 ntBASIC3.1□□□□□ -1.91
SMIM28A0A1B0GU29 PLCE1P1-201ENST00000622094 305 ntBASIC3.1□□□□□ -1.91
SMIM28A0A1B0GU29 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.1□□□□□ -1.91
SMIM28A0A1B0GU29 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SMIM28A0A1B0GU29 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SMIM28A0A1B0GU29 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SMIM28A0A1B0GU29 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
SMIM28A0A1B0GU29 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.09□□□□□ -1.91
SMIM28A0A1B0GU29 ZNF734P-201ENST00000419494 1534 ntBASIC3.09□□□□□ -1.91
SMIM28A0A1B0GU29 RNU6-492P-201ENST00000363035 104 ntBASIC3.09□□□□□ -1.91
SMIM28A0A1B0GU29 RNU5D-1-201ENST00000363299 116 ntBASIC3.09□□□□□ -1.91
SMIM28A0A1B0GU29 RNU6-1066P-201ENST00000363573 105 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms