Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.92□□□□□ -1.62
HCFC2Q9Y5Z7 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.92□□□□□ -1.62
HCFC2Q9Y5Z7 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
HCFC2Q9Y5Z7 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
HCFC2Q9Y5Z7 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HCFC2Q9Y5Z7 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.91□□□□□ -1.62
HCFC2Q9Y5Z7 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.91□□□□□ -1.62
HCFC2Q9Y5Z7 AC109446.4-201ENST00000623235 2755 ntBASIC4.91□□□□□ -1.62
HCFC2Q9Y5Z7 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
HCFC2Q9Y5Z7 OR5P1P-201ENST00000299512 925 ntBASIC4.91□□□□□ -1.62
HCFC2Q9Y5Z7 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
HCFC2Q9Y5Z7 U3.12-201ENST00000364498 214 ntBASIC4.91□□□□□ -1.62
HCFC2Q9Y5Z7 SNORA70C-201ENST00000384538 135 ntBASIC4.91□□□□□ -1.62
HCFC2Q9Y5Z7 RNU6-831P-201ENST00000384548 107 ntBASIC4.91□□□□□ -1.62
HCFC2Q9Y5Z7 AL590762.2-201ENST00000395798 571 ntBASIC4.91□□□□□ -1.62
HCFC2Q9Y5Z7 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HCFC2Q9Y5Z7 Z98745.1-201ENST00000402553 494 ntBASIC4.91□□□□□ -1.62
HCFC2Q9Y5Z7 RNU4-26P-201ENST00000410270 107 ntBASIC4.91□□□□□ -1.62
HCFC2Q9Y5Z7 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC4.91□□□□□ -1.62
HCFC2Q9Y5Z7 RPS15AP12-201ENST00000419498 388 ntBASIC4.91□□□□□ -1.62
HCFC2Q9Y5Z7 AL358176.3-201ENST00000420757 454 ntBASIC4.91□□□□□ -1.62
HCFC2Q9Y5Z7 RPS20P5-201ENST00000434808 360 ntBASIC4.91□□□□□ -1.62
HCFC2Q9Y5Z7 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HCFC2Q9Y5Z7 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.91□□□□□ -1.62
HCFC2Q9Y5Z7 HMGB1P15-201ENST00000453854 435 ntBASIC4.91□□□□□ -1.62
HCFC2Q9Y5Z7 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.91□□□□□ -1.62
HCFC2Q9Y5Z7 RPL23AP11-201ENST00000475260 469 ntBASIC4.91□□□□□ -1.62
HCFC2Q9Y5Z7 AL163540.1-201ENST00000485382 386 ntBASIC4.91□□□□□ -1.62
HCFC2Q9Y5Z7 FAM206BP-201ENST00000510179 541 ntBASIC4.91□□□□□ -1.62
HCFC2Q9Y5Z7 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.91□□□□□ -1.62
HCFC2Q9Y5Z7 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.91□□□□□ -1.62
HCFC2Q9Y5Z7 AL355836.1-201ENST00000555951 870 ntBASIC4.91□□□□□ -1.62
HCFC2Q9Y5Z7 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.91□□□□□ -1.62
HCFC2Q9Y5Z7 ARF4P1-201ENST00000605447 541 ntBASIC4.91□□□□□ -1.62
HCFC2Q9Y5Z7 AL627309.6-201ENST00000606857 840 ntBASIC4.91□□□□□ -1.62
HCFC2Q9Y5Z7 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.91□□□□□ -1.62
HCFC2Q9Y5Z7 OR6R2P-201ENST00000609216 300 ntBASIC4.91□□□□□ -1.62
HCFC2Q9Y5Z7 AC023043.4-201ENST00000612081 449 ntBASIC4.91□□□□□ -1.62
HCFC2Q9Y5Z7 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.91□□□□□ -1.62
HCFC2Q9Y5Z7 ZYXP1-201ENST00000617638 118 ntBASIC4.91□□□□□ -1.62
HCFC2Q9Y5Z7 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.91□□□□□ -1.62
HCFC2Q9Y5Z7 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
HCFC2Q9Y5Z7 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HCFC2Q9Y5Z7 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.91□□□□□ -1.62
HCFC2Q9Y5Z7 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HCFC2Q9Y5Z7 AC010329.2-201ENST00000595195 2737 ntBASIC4.91□□□□□ -1.62
HCFC2Q9Y5Z7 ASNSP3-201ENST00000451989 1306 ntBASIC4.91□□□□□ -1.62
HCFC2Q9Y5Z7 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.91□□□□□ -1.62
HCFC2Q9Y5Z7 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
HCFC2Q9Y5Z7 MUC2-202ENST00000613187 4845 ntBASIC4.9□□□□□ -1.62
HCFC2Q9Y5Z7 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
HCFC2Q9Y5Z7 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.9□□□□□ -1.62
HCFC2Q9Y5Z7 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.9□□□□□ -1.62
HCFC2Q9Y5Z7 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.62
HCFC2Q9Y5Z7 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
HCFC2Q9Y5Z7 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
HCFC2Q9Y5Z7 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
HCFC2Q9Y5Z7 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.62
HCFC2Q9Y5Z7 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.9□□□□□ -1.62
HCFC2Q9Y5Z7 AL139276.1-201ENST00000311910 1001 ntBASIC4.9□□□□□ -1.63
HCFC2Q9Y5Z7 MIR659-201ENST00000384963 97 ntBASIC4.9□□□□□ -1.63
HCFC2Q9Y5Z7 RPS29P17-201ENST00000430795 166 ntBASIC4.9□□□□□ -1.63
HCFC2Q9Y5Z7 RPL12P18-201ENST00000437175 325 ntBASIC4.9□□□□□ -1.63
HCFC2Q9Y5Z7 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.9□□□□□ -1.63
HCFC2Q9Y5Z7 NUTF2P3-201ENST00000448540 384 ntBASIC4.9□□□□□ -1.63
HCFC2Q9Y5Z7 AC005297.2-201ENST00000450430 606 ntBASIC4.9□□□□□ -1.63
HCFC2Q9Y5Z7 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.9□□□□□ -1.63
HCFC2Q9Y5Z7 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.9□□□□□ -1.63
HCFC2Q9Y5Z7 RNU6-1218P-201ENST00000458990 108 ntBASIC4.9□□□□□ -1.63
HCFC2Q9Y5Z7 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HCFC2Q9Y5Z7 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC4.9□□□□□ -1.63
HCFC2Q9Y5Z7 AC097486.1-201ENST00000515331 210 ntBASIC4.9□□□□□ -1.63
HCFC2Q9Y5Z7 Y_RNA.718-201ENST00000517110 102 ntBASIC4.9□□□□□ -1.63
HCFC2Q9Y5Z7 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.9□□□□□ -1.63
HCFC2Q9Y5Z7 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HCFC2Q9Y5Z7 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.9□□□□□ -1.63
HCFC2Q9Y5Z7 POLR3GP2-201ENST00000588366 668 ntBASIC4.9□□□□□ -1.63
HCFC2Q9Y5Z7 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.9□□□□□ -1.63
HCFC2Q9Y5Z7 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.9□□□□□ -1.63
HCFC2Q9Y5Z7 AC068790.3-201ENST00000602988 553 ntBASIC4.9□□□□□ -1.63
HCFC2Q9Y5Z7 CYP2C61P-201ENST00000604072 290 ntBASIC4.9□□□□□ -1.63
HCFC2Q9Y5Z7 AL080274.1-201ENST00000605565 220 ntBASIC4.9□□□□□ -1.63
HCFC2Q9Y5Z7 HSPE1P14-201ENST00000605812 302 ntBASIC4.9□□□□□ -1.63
HCFC2Q9Y5Z7 AL122125.1-201ENST00000616999 600 ntBASIC4.9□□□□□ -1.63
HCFC2Q9Y5Z7 RNA5SP439-201ENST00000617595 124 ntBASIC4.9□□□□□ -1.63
HCFC2Q9Y5Z7 AL445567.2-201ENST00000618935 498 ntBASIC4.9□□□□□ -1.63
HCFC2Q9Y5Z7 AC040168.1-201ENST00000623594 991 ntBASIC4.9□□□□□ -1.63
HCFC2Q9Y5Z7 AP000843.1-201ENST00000624880 701 ntBASIC4.9□□□□□ -1.63
HCFC2Q9Y5Z7 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
HCFC2Q9Y5Z7 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.63
HCFC2Q9Y5Z7 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HCFC2Q9Y5Z7 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HCFC2Q9Y5Z7 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.9□□□□□ -1.63
HCFC2Q9Y5Z7 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HCFC2Q9Y5Z7 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.9□□□□□ -1.63
HCFC2Q9Y5Z7 MTND5P1-201ENST00000445440 1375 ntBASIC4.9□□□□□ -1.63
HCFC2Q9Y5Z7 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HCFC2Q9Y5Z7 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
HCFC2Q9Y5Z7 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
HCFC2Q9Y5Z7 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms