Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AL355379.1-201ENST00000405542 640 ntBASIC3.95□□□□□ -1.78
SNX9Q9Y5X1 AC073264.1-201ENST00000411508 416 ntBASIC3.95□□□□□ -1.78
SNX9Q9Y5X1 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.95□□□□□ -1.78
SNX9Q9Y5X1 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.95□□□□□ -1.78
SNX9Q9Y5X1 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.95□□□□□ -1.78
SNX9Q9Y5X1 AL953862.1-201ENST00000423016 168 ntBASIC3.95□□□□□ -1.78
SNX9Q9Y5X1 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.95□□□□□ -1.78
SNX9Q9Y5X1 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.95□□□□□ -1.78
SNX9Q9Y5X1 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.95□□□□□ -1.78
SNX9Q9Y5X1 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.95□□□□□ -1.78
SNX9Q9Y5X1 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.95□□□□□ -1.78
SNX9Q9Y5X1 AL445669.2-201ENST00000454425 421 ntBASIC3.95□□□□□ -1.78
SNX9Q9Y5X1 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.95□□□□□ -1.78
SNX9Q9Y5X1 AP001086.1-201ENST00000494882 321 ntBASIC3.95□□□□□ -1.78
SNX9Q9Y5X1 NDUFB4P9-201ENST00000511646 388 ntBASIC3.95□□□□□ -1.78
SNX9Q9Y5X1 MTCO2P32-201ENST00000514865 403 ntBASIC3.95□□□□□ -1.78
SNX9Q9Y5X1 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.95□□□□□ -1.78
SNX9Q9Y5X1 NARSP2-201ENST00000518524 679 ntBASIC3.95□□□□□ -1.78
SNX9Q9Y5X1 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.95□□□□□ -1.78
SNX9Q9Y5X1 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.95□□□□□ -1.78
SNX9Q9Y5X1 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.95□□□□□ -1.78
SNX9Q9Y5X1 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.95□□□□□ -1.78
SNX9Q9Y5X1 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.95□□□□□ -1.78
SNX9Q9Y5X1 MTCYBP28-201ENST00000566728 1132 ntBASIC3.95□□□□□ -1.78
SNX9Q9Y5X1 MIR4429-201ENST00000580105 73 ntBASIC3.95□□□□□ -1.78
SNX9Q9Y5X1 AC008507.1-201ENST00000587506 734 ntBASIC3.95□□□□□ -1.78
SNX9Q9Y5X1 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.95□□□□□ -1.78
SNX9Q9Y5X1 AC073544.2-201ENST00000601155 540 ntBASIC3.95□□□□□ -1.78
SNX9Q9Y5X1 AC008443.7-201ENST00000622195 246 ntBASIC3.95□□□□□ -1.78
SNX9Q9Y5X1 AC092184.1-201ENST00000625042 715 ntBASIC3.95□□□□□ -1.78
SNX9Q9Y5X1 AL034408.1-202ENST00000636088 415 ntBASIC3.95□□□□□ -1.78
SNX9Q9Y5X1 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.95□□□□□ -1.78
SNX9Q9Y5X1 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.95□□□□□ -1.78
SNX9Q9Y5X1 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
SNX9Q9Y5X1 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.94□□□□□ -1.78
SNX9Q9Y5X1 ZNF37BP-203ENST00000452306 1352 ntBASIC3.94□□□□□ -1.78
SNX9Q9Y5X1 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
SNX9Q9Y5X1 RPL21P132-201ENST00000331267 462 ntBASIC3.94□□□□□ -1.78
SNX9Q9Y5X1 SNORD6-201ENST00000365444 73 ntBASIC3.94□□□□□ -1.78
SNX9Q9Y5X1 RNA5SP88-201ENST00000365560 109 ntBASIC3.94□□□□□ -1.78
SNX9Q9Y5X1 RNU6-1122P-201ENST00000384449 107 ntBASIC3.94□□□□□ -1.78
SNX9Q9Y5X1 MIR649-201ENST00000384843 97 ntBASIC3.94□□□□□ -1.78
SNX9Q9Y5X1 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
SNX9Q9Y5X1 RNU2-28P-201ENST00000410457 189 ntBASIC3.94□□□□□ -1.78
SNX9Q9Y5X1 RPS15AP38-201ENST00000413110 372 ntBASIC3.94□□□□□ -1.78
SNX9Q9Y5X1 HMGB3P20-201ENST00000417997 600 ntBASIC3.94□□□□□ -1.78
SNX9Q9Y5X1 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.94□□□□□ -1.78
SNX9Q9Y5X1 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SNX9Q9Y5X1 AC006366.1-201ENST00000422002 759 ntBASIC3.94□□□□□ -1.78
SNX9Q9Y5X1 CYCSP46-201ENST00000423569 204 ntBASIC3.94□□□□□ -1.78
SNX9Q9Y5X1 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.94□□□□□ -1.78
SNX9Q9Y5X1 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.94□□□□□ -1.78
SNX9Q9Y5X1 RPS3AP46-201ENST00000448352 682 ntBASIC3.94□□□□□ -1.78
SNX9Q9Y5X1 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.94□□□□□ -1.78
SNX9Q9Y5X1 ZNF114P1-201ENST00000453500 292 ntBASIC3.94□□□□□ -1.78
SNX9Q9Y5X1 DNAJC19P1-201ENST00000455312 319 ntBASIC3.94□□□□□ -1.78
SNX9Q9Y5X1 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.94□□□□□ -1.78
SNX9Q9Y5X1 AC091564.1-201ENST00000464563 479 ntBASIC3.94□□□□□ -1.78
SNX9Q9Y5X1 AC068724.1-201ENST00000487100 792 ntBASIC3.94□□□□□ -1.78
SNX9Q9Y5X1 AC010424.1-201ENST00000506336 297 ntBASIC3.94□□□□□ -1.78
SNX9Q9Y5X1 MTCO3P7-201ENST00000510008 774 ntBASIC3.94□□□□□ -1.78
SNX9Q9Y5X1 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SNX9Q9Y5X1 MTND3P5-201ENST00000512798 333 ntBASIC3.94□□□□□ -1.78
SNX9Q9Y5X1 RNU2-58P-201ENST00000516403 183 ntBASIC3.94□□□□□ -1.78
SNX9Q9Y5X1 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.94□□□□□ -1.78
SNX9Q9Y5X1 AC087276.1-201ENST00000529659 480 ntBASIC3.94□□□□□ -1.78
SNX9Q9Y5X1 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.94□□□□□ -1.78
SNX9Q9Y5X1 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.94□□□□□ -1.78
SNX9Q9Y5X1 OR6C7P-201ENST00000547875 934 ntBASIC3.94□□□□□ -1.78
SNX9Q9Y5X1 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.94□□□□□ -1.78
SNX9Q9Y5X1 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.94□□□□□ -1.78
SNX9Q9Y5X1 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.94□□□□□ -1.78
SNX9Q9Y5X1 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.94□□□□□ -1.78
SNX9Q9Y5X1 RSL24D1P11-201ENST00000591045 491 ntBASIC3.94□□□□□ -1.78
SNX9Q9Y5X1 AL031775.1-201ENST00000607014 887 ntBASIC3.94□□□□□ -1.78
SNX9Q9Y5X1 HULC.1-201ENST00000612720 240 ntBASIC3.94□□□□□ -1.78
SNX9Q9Y5X1 AC079228.1-201ENST00000624774 1049 ntBASIC3.94□□□□□ -1.78
SNX9Q9Y5X1 AC112200.1-201ENST00000625015 234 ntBASIC3.94□□□□□ -1.78
SNX9Q9Y5X1 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.94□□□□□ -1.78
SNX9Q9Y5X1 AC127502.3-201ENST00000636170 1206 ntBASIC3.94□□□□□ -1.78
SNX9Q9Y5X1 AP000553.6-201ENST00000641242 118 ntBASIC3.94□□□□□ -1.78
SNX9Q9Y5X1 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.94□□□□□ -1.78
SNX9Q9Y5X1 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.94□□□□□ -1.78
SNX9Q9Y5X1 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
SNX9Q9Y5X1 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
SNX9Q9Y5X1 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SNX9Q9Y5X1 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.93□□□□□ -1.78
SNX9Q9Y5X1 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
SNX9Q9Y5X1 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SNX9Q9Y5X1 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SNX9Q9Y5X1 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SNX9Q9Y5X1 SNORA31-201ENST00000362607 130 ntBASIC3.93□□□□□ -1.78
SNX9Q9Y5X1 U3.4-201ENST00000363352 213 ntBASIC3.93□□□□□ -1.78
SNX9Q9Y5X1 RNU4-75P-201ENST00000364621 146 ntBASIC3.93□□□□□ -1.78
SNX9Q9Y5X1 RNA5SP189-201ENST00000364920 115 ntBASIC3.93□□□□□ -1.78
SNX9Q9Y5X1 Y_RNA.553-201ENST00000384670 102 ntBASIC3.93□□□□□ -1.78
SNX9Q9Y5X1 EIF5P1-201ENST00000400019 1231 ntBASIC3.93□□□□□ -1.78
SNX9Q9Y5X1 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.93□□□□□ -1.78
SNX9Q9Y5X1 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC3.93□□□□□ -1.78
SNX9Q9Y5X1 SYF2P2-201ENST00000417620 583 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms