Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 AC069285.2-201ENST00000440210 275 ntBASIC4.45□□□□□ -1.7
PCDHA3Q9Y5H8 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.45□□□□□ -1.7
PCDHA3Q9Y5H8 AL512326.1-201ENST00000443050 721 ntBASIC4.45□□□□□ -1.7
PCDHA3Q9Y5H8 ARL2BPP10-201ENST00000446487 531 ntBASIC4.45□□□□□ -1.7
PCDHA3Q9Y5H8 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.45□□□□□ -1.7
PCDHA3Q9Y5H8 NPM1P49-201ENST00000448027 714 ntBASIC4.45□□□□□ -1.7
PCDHA3Q9Y5H8 AC009963.2-201ENST00000453431 138 ntBASIC4.45□□□□□ -1.7
PCDHA3Q9Y5H8 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.45□□□□□ -1.7
PCDHA3Q9Y5H8 RPS26P3-201ENST00000470205 348 ntBASIC4.45□□□□□ -1.7
PCDHA3Q9Y5H8 AC023598.1-201ENST00000472521 361 ntBASIC4.45□□□□□ -1.7
PCDHA3Q9Y5H8 AC090543.2-201ENST00000483963 348 ntBASIC4.45□□□□□ -1.7
PCDHA3Q9Y5H8 AC004057.1-201ENST00000485827 348 ntBASIC4.45□□□□□ -1.7
PCDHA3Q9Y5H8 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.45□□□□□ -1.7
PCDHA3Q9Y5H8 PTGES3P3-201ENST00000511479 482 ntBASIC4.45□□□□□ -1.7
PCDHA3Q9Y5H8 Vault.3-201ENST00000516676 95 ntBASIC4.45□□□□□ -1.7
PCDHA3Q9Y5H8 RNA5SP73-201ENST00000516744 108 ntBASIC4.45□□□□□ -1.7
PCDHA3Q9Y5H8 RNU4-60P-201ENST00000517239 135 ntBASIC4.45□□□□□ -1.7
PCDHA3Q9Y5H8 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.45□□□□□ -1.7
PCDHA3Q9Y5H8 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHA3Q9Y5H8 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC4.45□□□□□ -1.7
PCDHA3Q9Y5H8 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.45□□□□□ -1.7
PCDHA3Q9Y5H8 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.45□□□□□ -1.7
PCDHA3Q9Y5H8 MIR3146-201ENST00000580367 79 ntBASIC4.45□□□□□ -1.7
PCDHA3Q9Y5H8 LLPHP1-201ENST00000603571 367 ntBASIC4.45□□□□□ -1.7
PCDHA3Q9Y5H8 AC113403.1-201ENST00000604910 193 ntBASIC4.45□□□□□ -1.7
PCDHA3Q9Y5H8 AL109618.2-201ENST00000605527 211 ntBASIC4.45□□□□□ -1.7
PCDHA3Q9Y5H8 AC011816.2-201ENST00000607089 556 ntBASIC4.45□□□□□ -1.7
PCDHA3Q9Y5H8 AL391813.2-201ENST00000609113 322 ntBASIC4.45□□□□□ -1.7
PCDHA3Q9Y5H8 RN7SL722P-201ENST00000617780 284 ntBASIC4.45□□□□□ -1.7
PCDHA3Q9Y5H8 RN7SL565P-201ENST00000618246 284 ntBASIC4.45□□□□□ -1.7
PCDHA3Q9Y5H8 MIR6863-201ENST00000636112 90 ntBASIC4.45□□□□□ -1.7
PCDHA3Q9Y5H8 Z73965.1-201ENST00000623412 2297 ntBASIC4.45□□□□□ -1.7
PCDHA3Q9Y5H8 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.45□□□□□ -1.7
PCDHA3Q9Y5H8 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.45□□□□□ -1.7
PCDHA3Q9Y5H8 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 AC018529.3-201ENST00000624212 2254 ntBASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 RNU6-114P-201ENST00000384704 105 ntBASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 MTCO3P40-201ENST00000392516 676 ntBASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 CYB5AP4-201ENST00000396692 399 ntBASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 AL583835.1-201ENST00000399570 407 ntBASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 CIR1P3-201ENST00000405137 479 ntBASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 RPS4XP9-201ENST00000405151 780 ntBASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 AC127391.1-201ENST00000411737 98 ntBASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 AL590139.1-201ENST00000416267 400 ntBASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 CHIAP3-201ENST00000423668 1133 ntBASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 AC233728.2-201ENST00000425348 757 ntBASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 AC133104.1-201ENST00000429100 218 ntBASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 RPL31P35-201ENST00000431058 377 ntBASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 CKS1BP5-201ENST00000434172 273 ntBASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 MRPS18BP2-201ENST00000434310 759 ntBASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 AC104850.1-201ENST00000435940 476 ntBASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 AC073264.2-201ENST00000448886 166 ntBASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 AC132479.1-201ENST00000449160 144 ntBASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 PPIAP3-201ENST00000450588 505 ntBASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 RAD23BP3-201ENST00000454157 1152 ntBASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 C1DP4-201ENST00000455429 424 ntBASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 UBDP1-202ENST00000457888 382 ntBASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 AC010587.1-201ENST00000505809 469 ntBASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 AC017037.2-201ENST00000513850 890 ntBASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 AC134698.4-201ENST00000523451 826 ntBASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 AP006289.1-201ENST00000538089 277 ntBASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 AL845331.3-202ENST00000562856 261 ntBASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 MIR4330-201ENST00000579077 105 ntBASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 AC112230.1-201ENST00000604342 547 ntBASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 AL139286.1-201ENST00000604465 483 ntBASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 AC055876.5-201ENST00000605667 259 ntBASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 OR6R2P-201ENST00000609216 300 ntBASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 AL161734.1-201ENST00000609720 557 ntBASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 AL133173.2-201ENST00000614270 90 ntBASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 MLECP1-201ENST00000615893 709 ntBASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 U73479.1-201ENST00000618062 168 ntBASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 AL359880.1-201ENST00000621879 266 ntBASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 AC009268.2-201ENST00000621925 457 ntBASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 AL157786.1-207ENST00000627771 695 ntBASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms