Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
PCDHB3Q9Y5E6 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PCDHB3Q9Y5E6 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PCDHB3Q9Y5E6 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PCDHB3Q9Y5E6 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PCDHB3Q9Y5E6 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
PCDHB3Q9Y5E6 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PCDHB3Q9Y5E6 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.13□□□□□ -1.43
PCDHB3Q9Y5E6 AP005432.1-201ENST00000580891 3485 ntBASIC6.13□□□□□ -1.43
PCDHB3Q9Y5E6 SNORD116-18-201ENST00000383961 92 ntBASIC6.13□□□□□ -1.43
PCDHB3Q9Y5E6 Y_RNA.441-201ENST00000384123 112 ntBASIC6.13□□□□□ -1.43
PCDHB3Q9Y5E6 Y_RNA.504-201ENST00000384481 104 ntBASIC6.13□□□□□ -1.43
PCDHB3Q9Y5E6 RNU6-658P-201ENST00000384606 106 ntBASIC6.13□□□□□ -1.43
PCDHB3Q9Y5E6 MIR92A2-201ENST00000385299 75 ntBASIC6.13□□□□□ -1.43
PCDHB3Q9Y5E6 AL162725.1-201ENST00000435405 301 ntBASIC6.13□□□□□ -1.43
PCDHB3Q9Y5E6 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.13□□□□□ -1.43
PCDHB3Q9Y5E6 RPS11P1-201ENST00000451072 473 ntBASIC6.13□□□□□ -1.43
PCDHB3Q9Y5E6 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.13□□□□□ -1.43
PCDHB3Q9Y5E6 RNU6-390P-201ENST00000516259 103 ntBASIC6.13□□□□□ -1.43
PCDHB3Q9Y5E6 MIR4420-201ENST00000583944 77 ntBASIC6.13□□□□□ -1.43
PCDHB3Q9Y5E6 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.13□□□□□ -1.43
PCDHB3Q9Y5E6 AC240442.1-201ENST00000616055 283 ntBASIC6.13□□□□□ -1.43
PCDHB3Q9Y5E6 MRPL57P1-201ENST00000621486 265 ntBASIC6.13□□□□□ -1.43
PCDHB3Q9Y5E6 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.13□□□□□ -1.43
PCDHB3Q9Y5E6 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC6.13□□□□□ -1.43
PCDHB3Q9Y5E6 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.13□□□□□ -1.43
PCDHB3Q9Y5E6 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
PCDHB3Q9Y5E6 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
PCDHB3Q9Y5E6 AP000432.2-201ENST00000624164 2048 ntBASIC6.13□□□□□ -1.43
PCDHB3Q9Y5E6 AC007529.1-201ENST00000418574 2178 ntBASIC6.13□□□□□ -1.43
PCDHB3Q9Y5E6 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PCDHB3Q9Y5E6 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
PCDHB3Q9Y5E6 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
PCDHB3Q9Y5E6 COX6B1P3-201ENST00000312310 260 ntBASIC6.12□□□□□ -1.43
PCDHB3Q9Y5E6 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PCDHB3Q9Y5E6 RNU6-288P-201ENST00000363690 104 ntBASIC6.12□□□□□ -1.43
PCDHB3Q9Y5E6 RNU6-1130P-201ENST00000365434 107 ntBASIC6.12□□□□□ -1.43
PCDHB3Q9Y5E6 MIR521-1-201ENST00000384902 87 ntBASIC6.12□□□□□ -1.43
PCDHB3Q9Y5E6 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
PCDHB3Q9Y5E6 HSPE1P8-201ENST00000406997 288 ntBASIC6.12□□□□□ -1.43
PCDHB3Q9Y5E6 RNU6-607P-201ENST00000411283 108 ntBASIC6.12□□□□□ -1.43
PCDHB3Q9Y5E6 CYCSP33-201ENST00000414485 327 ntBASIC6.12□□□□□ -1.43
PCDHB3Q9Y5E6 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PCDHB3Q9Y5E6 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PCDHB3Q9Y5E6 RPS27P26-201ENST00000494583 239 ntBASIC6.12□□□□□ -1.43
PCDHB3Q9Y5E6 NDUFB5P1-201ENST00000508134 564 ntBASIC6.12□□□□□ -1.43
PCDHB3Q9Y5E6 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC6.12□□□□□ -1.43
PCDHB3Q9Y5E6 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.12□□□□□ -1.43
PCDHB3Q9Y5E6 AC023824.2-201ENST00000566185 400 ntBASIC6.12□□□□□ -1.43
PCDHB3Q9Y5E6 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.12□□□□□ -1.43
PCDHB3Q9Y5E6 AC024614.2-201ENST00000577584 372 ntBASIC6.12□□□□□ -1.43
PCDHB3Q9Y5E6 RN7SL652P-201ENST00000577769 300 ntBASIC6.12□□□□□ -1.43
PCDHB3Q9Y5E6 MIR4282-201ENST00000583613 67 ntBASIC6.12□□□□□ -1.43
PCDHB3Q9Y5E6 AC023421.1-201ENST00000590535 1785 ntBASIC6.12□□□□□ -1.43
PCDHB3Q9Y5E6 AC124916.2-201ENST00000604416 224 ntBASIC6.12□□□□□ -1.43
PCDHB3Q9Y5E6 AC008555.7-201ENST00000605008 583 ntBASIC6.12□□□□□ -1.43
PCDHB3Q9Y5E6 MIR15A-201ENST00000607334 83 ntBASIC6.12□□□□□ -1.43
PCDHB3Q9Y5E6 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.12□□□□□ -1.43
PCDHB3Q9Y5E6 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC6.12□□□□□ -1.43
PCDHB3Q9Y5E6 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.12□□□□□ -1.43
PCDHB3Q9Y5E6 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PCDHB3Q9Y5E6 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
PCDHB3Q9Y5E6 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PCDHB3Q9Y5E6 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
PCDHB3Q9Y5E6 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PCDHB3Q9Y5E6 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PCDHB3Q9Y5E6 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
PCDHB3Q9Y5E6 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
PCDHB3Q9Y5E6 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PCDHB3Q9Y5E6 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PCDHB3Q9Y5E6 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PCDHB3Q9Y5E6 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
PCDHB3Q9Y5E6 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PCDHB3Q9Y5E6 RPL9P7-201ENST00000330965 580 ntBASIC6.11□□□□□ -1.43
PCDHB3Q9Y5E6 SNORD16-201ENST00000362803 99 ntBASIC6.11□□□□□ -1.43
PCDHB3Q9Y5E6 RNVU1-3-201ENST00000364313 161 ntBASIC6.11□□□□□ -1.43
PCDHB3Q9Y5E6 RNA5SP205-201ENST00000364653 136 ntBASIC6.11□□□□□ -1.43
PCDHB3Q9Y5E6 Y_RNA.273-201ENST00000364703 102 ntBASIC6.11□□□□□ -1.43
PCDHB3Q9Y5E6 RNU6-923P-201ENST00000364753 107 ntBASIC6.11□□□□□ -1.43
PCDHB3Q9Y5E6 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
PCDHB3Q9Y5E6 MIR578-201ENST00000384828 96 ntBASIC6.11□□□□□ -1.43
PCDHB3Q9Y5E6 Y_RNA.580-201ENST00000391004 95 ntBASIC6.11□□□□□ -1.43
PCDHB3Q9Y5E6 Y_RNA.586-201ENST00000391146 98 ntBASIC6.11□□□□□ -1.43
PCDHB3Q9Y5E6 MIR190B-201ENST00000401119 79 ntBASIC6.11□□□□□ -1.43
PCDHB3Q9Y5E6 Y_RNA.590-201ENST00000410140 107 ntBASIC6.11□□□□□ -1.43
PCDHB3Q9Y5E6 RN7SKP281-201ENST00000410472 352 ntBASIC6.11□□□□□ -1.43
PCDHB3Q9Y5E6 U3.43-201ENST00000410734 213 ntBASIC6.11□□□□□ -1.43
PCDHB3Q9Y5E6 AL354707.3-201ENST00000427308 331 ntBASIC6.11□□□□□ -1.43
PCDHB3Q9Y5E6 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.11□□□□□ -1.43
PCDHB3Q9Y5E6 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.11□□□□□ -1.43
PCDHB3Q9Y5E6 OR6D1P-201ENST00000436165 939 ntBASIC6.11□□□□□ -1.43
PCDHB3Q9Y5E6 AC004938.1-201ENST00000438468 308 ntBASIC6.11□□□□□ -1.43
PCDHB3Q9Y5E6 AL513043.1-201ENST00000439124 535 ntBASIC6.11□□□□□ -1.43
PCDHB3Q9Y5E6 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.11□□□□□ -1.43
PCDHB3Q9Y5E6 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.11□□□□□ -1.43
PCDHB3Q9Y5E6 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.11□□□□□ -1.43
PCDHB3Q9Y5E6 RPL9P9-202ENST00000466501 579 ntBASIC6.11□□□□□ -1.43
PCDHB3Q9Y5E6 RN7SL643P-201ENST00000471845 291 ntBASIC6.11□□□□□ -1.43
PCDHB3Q9Y5E6 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
PCDHB3Q9Y5E6 TRAPPC2P7-201ENST00000509650 231 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms