Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 NACAP2-201ENST00000318548 624 ntBASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 RPL7P26-201ENST00000333817 754 ntBASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 DSTNP4-201ENST00000399472 474 ntBASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 RPL23AP26-201ENST00000412728 464 ntBASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 ELOCP4-201ENST00000420090 333 ntBASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 RPL30P3-201ENST00000424262 333 ntBASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 AL353729.1-201ENST00000425044 720 ntBASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 MTCO3P46-201ENST00000425787 232 ntBASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 RPL36P19-201ENST00000430744 301 ntBASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 RPL23AP30-201ENST00000432419 501 ntBASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 AC104651.2-201ENST00000447549 528 ntBASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 AC105137.1-201ENST00000484355 562 ntBASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 AC096576.1-201ENST00000489014 359 ntBASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 HMGB3P16-201ENST00000508037 287 ntBASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 RNU6-327P-201ENST00000516270 127 ntBASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 SNORA67.7-201ENST00000516664 135 ntBASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 AC107953.1-201ENST00000522216 297 ntBASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 AP003730.1-201ENST00000524605 285 ntBASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 AC053481.3-201ENST00000577881 843 ntBASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 AC010525.2-201ENST00000590920 195 ntBASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 uc_338.5-201ENST00000611839 155 ntBASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 AC015871.5-202ENST00000623252 701 ntBASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 BTBD10P1-201ENST00000549824 1352 ntBASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.14□□□□□ -1.59
PDLIM7Q9NR12 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.13□□□□□ -1.59
PDLIM7Q9NR12 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.13□□□□□ -1.59
PDLIM7Q9NR12 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.13□□□□□ -1.59
PDLIM7Q9NR12 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
PDLIM7Q9NR12 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.13□□□□□ -1.59
PDLIM7Q9NR12 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
PDLIM7Q9NR12 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
PDLIM7Q9NR12 RNA5SP391-201ENST00000363456 119 ntBASIC5.13□□□□□ -1.59
PDLIM7Q9NR12 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
PDLIM7Q9NR12 SNORA32.2-201ENST00000384049 122 ntBASIC5.13□□□□□ -1.59
PDLIM7Q9NR12 AL591416.1-201ENST00000404015 867 ntBASIC5.13□□□□□ -1.59
PDLIM7Q9NR12 AL023807.1-201ENST00000407932 359 ntBASIC5.13□□□□□ -1.59
PDLIM7Q9NR12 TMSB10P2-201ENST00000416049 131 ntBASIC5.13□□□□□ -1.59
PDLIM7Q9NR12 OR4F13P-201ENST00000428478 931 ntBASIC5.13□□□□□ -1.59
PDLIM7Q9NR12 HSPE1P28-201ENST00000443139 211 ntBASIC5.13□□□□□ -1.59
PDLIM7Q9NR12 GEMIN8P3-201ENST00000445417 720 ntBASIC5.13□□□□□ -1.59
PDLIM7Q9NR12 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC5.13□□□□□ -1.59
PDLIM7Q9NR12 AC005297.2-201ENST00000450430 606 ntBASIC5.13□□□□□ -1.59
PDLIM7Q9NR12 IFNWP4-201ENST00000453148 294 ntBASIC5.13□□□□□ -1.59
PDLIM7Q9NR12 UQCRHP4-201ENST00000471686 272 ntBASIC5.13□□□□□ -1.59
PDLIM7Q9NR12 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PDLIM7Q9NR12 NPM1P41-201ENST00000512920 831 ntBASIC5.13□□□□□ -1.59
PDLIM7Q9NR12 AC112206.3-201ENST00000514578 389 ntBASIC5.13□□□□□ -1.59
PDLIM7Q9NR12 SNORA19.2-201ENST00000516013 114 ntBASIC5.13□□□□□ -1.59
PDLIM7Q9NR12 RNU6-1045P-201ENST00000516321 107 ntBASIC5.13□□□□□ -1.59
PDLIM7Q9NR12 OR8R1P-201ENST00000543943 764 ntBASIC5.13□□□□□ -1.59
PDLIM7Q9NR12 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC5.13□□□□□ -1.59
PDLIM7Q9NR12 LSM6P2-201ENST00000552208 177 ntBASIC5.13□□□□□ -1.59
PDLIM7Q9NR12 HMGB1P6-201ENST00000569046 646 ntBASIC5.13□□□□□ -1.59
PDLIM7Q9NR12 AC012182.1-201ENST00000570133 895 ntBASIC5.13□□□□□ -1.59
PDLIM7Q9NR12 SNX18P1Y-201ENST00000616231 511 ntBASIC5.13□□□□□ -1.59
PDLIM7Q9NR12 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC5.13□□□□□ -1.59
PDLIM7Q9NR12 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
PDLIM7Q9NR12 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.13□□□□□ -1.59
PDLIM7Q9NR12 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
PDLIM7Q9NR12 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC5.13□□□□□ -1.59
PDLIM7Q9NR12 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.12□□□□□ -1.59
PDLIM7Q9NR12 AC011978.2-201ENST00000569835 2054 ntBASIC5.12□□□□□ -1.59
PDLIM7Q9NR12 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.12□□□□□ -1.59
PDLIM7Q9NR12 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.12□□□□□ -1.59
PDLIM7Q9NR12 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.12□□□□□ -1.59
PDLIM7Q9NR12 AL359922.3-201ENST00000624779 1670 ntBASIC5.12□□□□□ -1.59
PDLIM7Q9NR12 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PDLIM7Q9NR12 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.12□□□□□ -1.59
PDLIM7Q9NR12 RNY1P12-201ENST00000364251 105 ntBASIC5.12□□□□□ -1.59
PDLIM7Q9NR12 RNU6-108P-201ENST00000365558 107 ntBASIC5.12□□□□□ -1.59
PDLIM7Q9NR12 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PDLIM7Q9NR12 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.12□□□□□ -1.59
PDLIM7Q9NR12 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC5.12□□□□□ -1.59
PDLIM7Q9NR12 AC006548.1-201ENST00000427470 102 ntBASIC5.12□□□□□ -1.59
PDLIM7Q9NR12 GPR143P-201ENST00000434155 205 ntBASIC5.12□□□□□ -1.59
PDLIM7Q9NR12 AC024082.2-201ENST00000434771 238 ntBASIC5.12□□□□□ -1.59
PDLIM7Q9NR12 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms