Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.09□□□□□ -1.75
DDX4Q9NQI0 RPS15AP40-201ENST00000419621 391 ntBASIC4.09□□□□□ -1.75
DDX4Q9NQI0 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.09□□□□□ -1.75
DDX4Q9NQI0 AL138799.3-201ENST00000438968 350 ntBASIC4.09□□□□□ -1.75
DDX4Q9NQI0 VN1R10P-201ENST00000447106 875 ntBASIC4.09□□□□□ -1.75
DDX4Q9NQI0 RPL39P6-201ENST00000448289 150 ntBASIC4.09□□□□□ -1.75
DDX4Q9NQI0 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.09□□□□□ -1.75
DDX4Q9NQI0 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.09□□□□□ -1.75
DDX4Q9NQI0 AC023598.1-201ENST00000472521 361 ntBASIC4.09□□□□□ -1.75
DDX4Q9NQI0 AC092451.1-201ENST00000480211 153 ntBASIC4.09□□□□□ -1.75
DDX4Q9NQI0 RPL5P23-201ENST00000496040 868 ntBASIC4.09□□□□□ -1.75
DDX4Q9NQI0 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.09□□□□□ -1.75
DDX4Q9NQI0 AC108078.3-201ENST00000502633 489 ntBASIC4.09□□□□□ -1.75
DDX4Q9NQI0 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.09□□□□□ -1.75
DDX4Q9NQI0 AC005178.1-201ENST00000508392 440 ntBASIC4.09□□□□□ -1.75
DDX4Q9NQI0 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC4.09□□□□□ -1.75
DDX4Q9NQI0 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.09□□□□□ -1.75
DDX4Q9NQI0 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.09□□□□□ -1.75
DDX4Q9NQI0 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.09□□□□□ -1.75
DDX4Q9NQI0 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC4.09□□□□□ -1.75
DDX4Q9NQI0 SNORA70.14-201ENST00000516205 110 ntBASIC4.09□□□□□ -1.75
DDX4Q9NQI0 AC239860.2-201ENST00000525886 270 ntBASIC4.09□□□□□ -1.75
DDX4Q9NQI0 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.09□□□□□ -1.75
DDX4Q9NQI0 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC4.09□□□□□ -1.75
DDX4Q9NQI0 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC4.09□□□□□ -1.75
DDX4Q9NQI0 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.09□□□□□ -1.75
DDX4Q9NQI0 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.09□□□□□ -1.75
DDX4Q9NQI0 AC010620.1-201ENST00000601088 1102 ntBASIC4.09□□□□□ -1.75
DDX4Q9NQI0 AL606834.2-201ENST00000602954 668 ntBASIC4.09□□□□□ -1.75
DDX4Q9NQI0 AC105129.3-201ENST00000605455 485 ntBASIC4.09□□□□□ -1.75
DDX4Q9NQI0 RNA5SP108-201ENST00000605921 117 ntBASIC4.09□□□□□ -1.75
DDX4Q9NQI0 AC080013.6-201ENST00000606185 215 ntBASIC4.09□□□□□ -1.75
DDX4Q9NQI0 AC243773.3-201ENST00000613270 256 ntBASIC4.09□□□□□ -1.75
DDX4Q9NQI0 AF246928.1-201ENST00000623768 87 ntBASIC4.09□□□□□ -1.75
DDX4Q9NQI0 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.09□□□□□ -1.75
DDX4Q9NQI0 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC4.09□□□□□ -1.75
DDX4Q9NQI0 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.09□□□□□ -1.75
DDX4Q9NQI0 DDX43P2-201ENST00000604753 1354 ntBASIC4.09□□□□□ -1.75
DDX4Q9NQI0 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.09□□□□□ -1.75
DDX4Q9NQI0 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
DDX4Q9NQI0 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.09□□□□□ -1.75
DDX4Q9NQI0 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
DDX4Q9NQI0 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
DDX4Q9NQI0 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.09□□□□□ -1.76
DDX4Q9NQI0 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
DDX4Q9NQI0 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
DDX4Q9NQI0 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
DDX4Q9NQI0 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.08□□□□□ -1.76
DDX4Q9NQI0 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
DDX4Q9NQI0 RNU6-283P-201ENST00000364788 107 ntBASIC4.08□□□□□ -1.76
DDX4Q9NQI0 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
DDX4Q9NQI0 PIGPP2-201ENST00000411569 458 ntBASIC4.08□□□□□ -1.76
DDX4Q9NQI0 RPL31P2-201ENST00000413849 377 ntBASIC4.08□□□□□ -1.76
DDX4Q9NQI0 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.08□□□□□ -1.76
DDX4Q9NQI0 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC4.08□□□□□ -1.76
DDX4Q9NQI0 CKS1BP5-201ENST00000434172 273 ntBASIC4.08□□□□□ -1.76
DDX4Q9NQI0 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.08□□□□□ -1.76
DDX4Q9NQI0 MTCYBP39-201ENST00000437562 491 ntBASIC4.08□□□□□ -1.76
DDX4Q9NQI0 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.08□□□□□ -1.76
DDX4Q9NQI0 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.08□□□□□ -1.76
DDX4Q9NQI0 TRGVB-201ENST00000453257 471 ntBASIC4.08□□□□□ -1.76
DDX4Q9NQI0 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC4.08□□□□□ -1.76
DDX4Q9NQI0 ANP32BP2-201ENST00000454525 545 ntBASIC4.08□□□□□ -1.76
DDX4Q9NQI0 RN7SL504P-201ENST00000494496 287 ntBASIC4.08□□□□□ -1.76
DDX4Q9NQI0 RPS6P4-201ENST00000494693 758 ntBASIC4.08□□□□□ -1.76
DDX4Q9NQI0 AC068305.1-201ENST00000497406 726 ntBASIC4.08□□□□□ -1.76
DDX4Q9NQI0 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.08□□□□□ -1.76
DDX4Q9NQI0 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.08□□□□□ -1.76
DDX4Q9NQI0 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.08□□□□□ -1.76
DDX4Q9NQI0 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
DDX4Q9NQI0 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4.08□□□□□ -1.76
DDX4Q9NQI0 RN7SKP83-201ENST00000516512 178 ntBASIC4.08□□□□□ -1.76
DDX4Q9NQI0 RNU6-759P-201ENST00000516740 103 ntBASIC4.08□□□□□ -1.76
DDX4Q9NQI0 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.08□□□□□ -1.76
DDX4Q9NQI0 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.08□□□□□ -1.76
DDX4Q9NQI0 DEFB131D-201ENST00000526803 184 ntBASIC4.08□□□□□ -1.76
DDX4Q9NQI0 AP004242.1-201ENST00000533701 349 ntBASIC4.08□□□□□ -1.76
DDX4Q9NQI0 AC005476.1-201ENST00000554427 397 ntBASIC4.08□□□□□ -1.76
DDX4Q9NQI0 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.08□□□□□ -1.76
DDX4Q9NQI0 MIR4637-201ENST00000582405 84 ntBASIC4.08□□□□□ -1.76
DDX4Q9NQI0 AC110760.3-201ENST00000598794 467 ntBASIC4.08□□□□□ -1.76
DDX4Q9NQI0 AC010738.1-201ENST00000604970 987 ntBASIC4.08□□□□□ -1.76
DDX4Q9NQI0 RNU6-88P-201ENST00000606801 100 ntBASIC4.08□□□□□ -1.76
DDX4Q9NQI0 AC231657.1-201ENST00000624313 397 ntBASIC4.08□□□□□ -1.76
DDX4Q9NQI0 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
DDX4Q9NQI0 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.07□□□□□ -1.76
DDX4Q9NQI0 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
DDX4Q9NQI0 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.07□□□□□ -1.76
DDX4Q9NQI0 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.07□□□□□ -1.76
DDX4Q9NQI0 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.07□□□□□ -1.76
DDX4Q9NQI0 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.07□□□□□ -1.76
DDX4Q9NQI0 AL513185.3-201ENST00000433335 1300 ntBASIC4.07□□□□□ -1.76
DDX4Q9NQI0 RNU6-1226P-201ENST00000384317 107 ntBASIC4.07□□□□□ -1.76
DDX4Q9NQI0 SNRPEP2-201ENST00000397592 279 ntBASIC4.07□□□□□ -1.76
DDX4Q9NQI0 MIR1302-8-201ENST00000408342 128 ntBASIC4.07□□□□□ -1.76
DDX4Q9NQI0 RPL23AP39-201ENST00000415533 405 ntBASIC4.07□□□□□ -1.76
DDX4Q9NQI0 AL953862.1-201ENST00000423016 168 ntBASIC4.07□□□□□ -1.76
DDX4Q9NQI0 AC019178.2-201ENST00000423595 505 ntBASIC4.07□□□□□ -1.76
DDX4Q9NQI0 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.07□□□□□ -1.76
DDX4Q9NQI0 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms