Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 MIR1302-8-201ENST00000408342 128 ntBASIC3.47□□□□□ -1.85
CHMP1AQ9HD42 METTL5-204ENST00000409340 472 ntTSL 5 BASIC3.47□□□□□ -1.85
CHMP1AQ9HD42 FAR2P2-201ENST00000413041 594 ntBASIC3.47□□□□□ -1.85
CHMP1AQ9HD42 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.47□□□□□ -1.85
CHMP1AQ9HD42 CYCSP46-201ENST00000423569 204 ntBASIC3.47□□□□□ -1.85
CHMP1AQ9HD42 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC3.47□□□□□ -1.85
CHMP1AQ9HD42 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.47□□□□□ -1.85
CHMP1AQ9HD42 UBDP1-202ENST00000457888 382 ntBASIC3.47□□□□□ -1.85
CHMP1AQ9HD42 RPL35AP28-201ENST00000459730 331 ntBASIC3.47□□□□□ -1.85
CHMP1AQ9HD42 RPL23AP14-201ENST00000468281 468 ntBASIC3.47□□□□□ -1.85
CHMP1AQ9HD42 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CHMP1AQ9HD42 AC109327.1-201ENST00000471666 403 ntBASIC3.47□□□□□ -1.85
CHMP1AQ9HD42 TMED11P-201ENST00000479478 690 ntBASIC3.47□□□□□ -1.85
CHMP1AQ9HD42 RPL35P6-201ENST00000490024 372 ntBASIC3.47□□□□□ -1.85
CHMP1AQ9HD42 AK3P4-201ENST00000504283 583 ntBASIC3.47□□□□□ -1.85
CHMP1AQ9HD42 HMGB3P15-201ENST00000507326 574 ntBASIC3.47□□□□□ -1.85
CHMP1AQ9HD42 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
CHMP1AQ9HD42 OR5BM1P-201ENST00000512021 366 ntBASIC3.47□□□□□ -1.85
CHMP1AQ9HD42 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.47□□□□□ -1.85
CHMP1AQ9HD42 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.47□□□□□ -1.85
CHMP1AQ9HD42 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.47□□□□□ -1.85
CHMP1AQ9HD42 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.47□□□□□ -1.85
CHMP1AQ9HD42 AC125611.2-201ENST00000551907 647 ntBASIC3.47□□□□□ -1.85
CHMP1AQ9HD42 SETP2-201ENST00000553886 926 ntBASIC3.47□□□□□ -1.85
CHMP1AQ9HD42 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CHMP1AQ9HD42 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.47□□□□□ -1.85
CHMP1AQ9HD42 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.47□□□□□ -1.85
CHMP1AQ9HD42 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.47□□□□□ -1.85
CHMP1AQ9HD42 AC007599.1-201ENST00000568688 1174 ntBASIC3.47□□□□□ -1.85
CHMP1AQ9HD42 AC022655.2-201ENST00000577280 318 ntBASIC3.47□□□□□ -1.85
CHMP1AQ9HD42 AC012417.1-201ENST00000582307 1039 ntBASIC3.47□□□□□ -1.85
CHMP1AQ9HD42 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.47□□□□□ -1.85
CHMP1AQ9HD42 AC027807.2-201ENST00000616099 408 ntBASIC3.47□□□□□ -1.85
CHMP1AQ9HD42 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
CHMP1AQ9HD42 XIST_intron.1-201ENST00000619444 68 ntBASIC3.47□□□□□ -1.85
CHMP1AQ9HD42 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.47□□□□□ -1.85
CHMP1AQ9HD42 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CHMP1AQ9HD42 MTCO1P9-201ENST00000505577 1534 ntBASIC3.47□□□□□ -1.85
CHMP1AQ9HD42 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.47□□□□□ -1.85
CHMP1AQ9HD42 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.47□□□□□ -1.85
CHMP1AQ9HD42 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.47□□□□□ -1.85
CHMP1AQ9HD42 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.85
CHMP1AQ9HD42 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 EI24P2-201ENST00000397776 1076 ntBASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 CCNG1P1-201ENST00000406783 885 ntBASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 MIR1251-201ENST00000408552 70 ntBASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 RNU4-25P-201ENST00000410569 230 ntBASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 RNU2-71P-201ENST00000411395 189 ntBASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 AC078974.1-201ENST00000411597 223 ntBASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 AC090774.1-201ENST00000435925 246 ntBASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 AC004866.2-201ENST00000438285 481 ntBASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 AC118469.1-201ENST00000442943 488 ntBASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 COX6CP12-201ENST00000446748 202 ntBASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 MTND1P9-201ENST00000453775 944 ntBASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 AC234775.1-201ENST00000454247 670 ntBASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 RPL23AP31-201ENST00000456160 467 ntBASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 AP1S2P1-201ENST00000457344 379 ntBASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 RPL23AP24-201ENST00000458203 385 ntBASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 AF131216.2-201ENST00000512316 564 ntBASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 AC022483.1-201ENST00000514020 567 ntBASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 SNORA31.8-201ENST00000516327 108 ntBASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 RNA5SP49-201ENST00000516450 115 ntBASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 RNU6-1003P-201ENST00000517099 105 ntBASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 AC025881.1-201ENST00000518851 512 ntBASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 MED28P6-201ENST00000558776 231 ntBASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 AC012414.6-201ENST00000568241 401 ntBASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 MIR5697-201ENST00000578045 78 ntBASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 AC012065.4-201ENST00000602445 679 ntBASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 AC012443.1-201ENST00000605605 231 ntBASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 FAM27D1-201ENST00000612308 341 ntBASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 MIR6130-201ENST00000619419 109 ntBASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 AL161637.1-201ENST00000622380 412 ntBASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 AC092628.2-201ENST00000622492 339 ntBASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 147.6 ms