Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 BRK1P2-201ENST00000442875 223 ntBASIC4.85□□□□□ -1.63
CD248Q9HCU0 AL732372.2-207ENST00000445840 183 ntBASIC4.85□□□□□ -1.63
CD248Q9HCU0 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.85□□□□□ -1.63
CD248Q9HCU0 SEPT14P2-201ENST00000453405 183 ntBASIC4.85□□□□□ -1.63
CD248Q9HCU0 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.85□□□□□ -1.63
CD248Q9HCU0 MTND1P12-201ENST00000455231 147 ntBASIC4.85□□□□□ -1.63
CD248Q9HCU0 RPL7P19-201ENST00000469948 618 ntBASIC4.85□□□□□ -1.63
CD248Q9HCU0 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.85□□□□□ -1.63
CD248Q9HCU0 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.85□□□□□ -1.63
CD248Q9HCU0 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.85□□□□□ -1.63
CD248Q9HCU0 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.85□□□□□ -1.63
CD248Q9HCU0 AC098799.3-201ENST00000506095 438 ntBASIC4.85□□□□□ -1.63
CD248Q9HCU0 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.85□□□□□ -1.63
CD248Q9HCU0 SEPT14P4-201ENST00000513445 186 ntBASIC4.85□□□□□ -1.63
CD248Q9HCU0 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.85□□□□□ -1.63
CD248Q9HCU0 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.85□□□□□ -1.63
CD248Q9HCU0 IGLV3-26-201ENST00000520756 302 ntBASIC4.85□□□□□ -1.63
CD248Q9HCU0 FO082796.1-201ENST00000523795 183 ntBASIC4.85□□□□□ -1.63
CD248Q9HCU0 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.85□□□□□ -1.63
CD248Q9HCU0 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CD248Q9HCU0 MTND6P33-201ENST00000571794 183 ntBASIC4.85□□□□□ -1.63
CD248Q9HCU0 AP001180.3-201ENST00000582221 145 ntBASIC4.85□□□□□ -1.63
CD248Q9HCU0 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.85□□□□□ -1.63
CD248Q9HCU0 AL121932.1-201ENST00000605542 214 ntBASIC4.85□□□□□ -1.63
CD248Q9HCU0 AL355802.3-201ENST00000607571 545 ntBASIC4.85□□□□□ -1.63
CD248Q9HCU0 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.85□□□□□ -1.63
CD248Q9HCU0 AC068722.2-201ENST00000618734 544 ntBASIC4.85□□□□□ -1.63
CD248Q9HCU0 MIR7154-201ENST00000620673 73 ntBASIC4.85□□□□□ -1.63
CD248Q9HCU0 RMST_7.1-201ENST00000621935 268 ntBASIC4.85□□□□□ -1.63
CD248Q9HCU0 AC005858.4-201ENST00000623191 700 ntBASIC4.85□□□□□ -1.63
CD248Q9HCU0 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CD248Q9HCU0 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.85□□□□□ -1.63
CD248Q9HCU0 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CD248Q9HCU0 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
CD248Q9HCU0 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
CD248Q9HCU0 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CD248Q9HCU0 EOGT-210ENST00000615922 1931 ntBASIC4.84□□□□□ -1.63
CD248Q9HCU0 MTND5P3-201ENST00000438536 1800 ntBASIC4.84□□□□□ -1.63
CD248Q9HCU0 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
CD248Q9HCU0 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CD248Q9HCU0 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CD248Q9HCU0 XIAPP3-201ENST00000312918 795 ntBASIC4.84□□□□□ -1.63
CD248Q9HCU0 RNA5SP502-201ENST00000362694 119 ntBASIC4.84□□□□□ -1.63
CD248Q9HCU0 SNORA70.2-201ENST00000364506 135 ntBASIC4.84□□□□□ -1.63
CD248Q9HCU0 AL356967.1-201ENST00000406305 431 ntBASIC4.84□□□□□ -1.63
CD248Q9HCU0 AL354719.1-201ENST00000406535 843 ntBASIC4.84□□□□□ -1.63
CD248Q9HCU0 AC234782.4-201ENST00000417646 1048 ntBASIC4.84□□□□□ -1.63
CD248Q9HCU0 AC004552.1-201ENST00000419089 348 ntBASIC4.84□□□□□ -1.63
CD248Q9HCU0 RPS12P23-201ENST00000419579 400 ntBASIC4.84□□□□□ -1.63
CD248Q9HCU0 AL353193.1-201ENST00000421444 268 ntBASIC4.84□□□□□ -1.63
CD248Q9HCU0 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.84□□□□□ -1.63
CD248Q9HCU0 CHIAP3-201ENST00000423668 1133 ntBASIC4.84□□□□□ -1.63
CD248Q9HCU0 RPEP3-201ENST00000425462 676 ntBASIC4.84□□□□□ -1.63
CD248Q9HCU0 AL445669.1-201ENST00000426743 755 ntBASIC4.84□□□□□ -1.63
CD248Q9HCU0 RPL31P35-201ENST00000431058 377 ntBASIC4.84□□□□□ -1.63
CD248Q9HCU0 GPM6BP2-201ENST00000432046 144 ntBASIC4.84□□□□□ -1.63
CD248Q9HCU0 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.84□□□□□ -1.63
CD248Q9HCU0 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.84□□□□□ -1.63
CD248Q9HCU0 GPM6BP1-201ENST00000446387 144 ntBASIC4.84□□□□□ -1.63
CD248Q9HCU0 MRPL50P4-201ENST00000446432 475 ntBASIC4.84□□□□□ -1.63
CD248Q9HCU0 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.84□□□□□ -1.63
CD248Q9HCU0 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.84□□□□□ -1.63
CD248Q9HCU0 MEMO1P3-201ENST00000459811 302 ntBASIC4.84□□□□□ -1.63
CD248Q9HCU0 RPS26P3-201ENST00000470205 348 ntBASIC4.84□□□□□ -1.63
CD248Q9HCU0 AC017015.1-201ENST00000477387 286 ntBASIC4.84□□□□□ -1.63
CD248Q9HCU0 AC090543.2-201ENST00000483963 348 ntBASIC4.84□□□□□ -1.63
CD248Q9HCU0 AC004057.1-201ENST00000485827 348 ntBASIC4.84□□□□□ -1.63
CD248Q9HCU0 RN7SL558P-201ENST00000497468 299 ntBASIC4.84□□□□□ -1.63
CD248Q9HCU0 AC091868.1-201ENST00000508746 304 ntBASIC4.84□□□□□ -1.63
CD248Q9HCU0 AC093809.1-201ENST00000509155 340 ntBASIC4.84□□□□□ -1.63
CD248Q9HCU0 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.84□□□□□ -1.63
CD248Q9HCU0 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CD248Q9HCU0 RNA5SP154-201ENST00000516193 111 ntBASIC4.84□□□□□ -1.63
CD248Q9HCU0 RNU6-277P-201ENST00000516272 106 ntBASIC4.84□□□□□ -1.63
CD248Q9HCU0 Y_RNA.672-201ENST00000516289 104 ntBASIC4.84□□□□□ -1.63
CD248Q9HCU0 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.84□□□□□ -1.63
CD248Q9HCU0 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.84□□□□□ -1.63
CD248Q9HCU0 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.84□□□□□ -1.63
CD248Q9HCU0 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.84□□□□□ -1.63
CD248Q9HCU0 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.84□□□□□ -1.63
CD248Q9HCU0 AP005597.4-201ENST00000526762 229 ntBASIC4.84□□□□□ -1.63
CD248Q9HCU0 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.84□□□□□ -1.63
CD248Q9HCU0 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.84□□□□□ -1.63
CD248Q9HCU0 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.84□□□□□ -1.63
CD248Q9HCU0 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.84□□□□□ -1.63
CD248Q9HCU0 AC068831.4-201ENST00000556118 109 ntBASIC4.84□□□□□ -1.63
CD248Q9HCU0 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.84□□□□□ -1.63
CD248Q9HCU0 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.84□□□□□ -1.63
CD248Q9HCU0 HMGN1P30-201ENST00000589286 268 ntBASIC4.84□□□□□ -1.63
CD248Q9HCU0 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.84□□□□□ -1.63
CD248Q9HCU0 AL359999.1-201ENST00000604513 294 ntBASIC4.84□□□□□ -1.63
CD248Q9HCU0 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.84□□□□□ -1.63
CD248Q9HCU0 CDRT1-208ENST00000630868 794 ntBASIC4.84□□□□□ -1.63
CD248Q9HCU0 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CD248Q9HCU0 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
CD248Q9HCU0 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CD248Q9HCU0 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.84□□□□□ -1.64
CD248Q9HCU0 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.84□□□□□ -1.64
CD248Q9HCU0 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.84□□□□□ -1.64
CD248Q9HCU0 AP000542.2-201ENST00000623199 6179 ntBASIC4.84□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 158.3 ms