Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 BX276092.3-201ENST00000424182 230 ntBASIC2.1□□□□□ -2.07
KIAA1549Q9HCM3 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC2.1□□□□□ -2.07
KIAA1549Q9HCM3 OR51AB1P-201ENST00000429046 620 ntBASIC2.1□□□□□ -2.07
KIAA1549Q9HCM3 MTCO1P43-201ENST00000431831 488 ntBASIC2.1□□□□□ -2.07
KIAA1549Q9HCM3 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
KIAA1549Q9HCM3 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
KIAA1549Q9HCM3 UBE2D3P1-201ENST00000436669 444 ntBASIC2.1□□□□□ -2.07
KIAA1549Q9HCM3 RSL24D1P2-201ENST00000445584 366 ntBASIC2.1□□□□□ -2.07
KIAA1549Q9HCM3 AL353705.4-201ENST00000449661 238 ntBASIC2.1□□□□□ -2.07
KIAA1549Q9HCM3 AL513124.1-201ENST00000450410 614 ntBASIC2.1□□□□□ -2.07
KIAA1549Q9HCM3 BX276092.4-201ENST00000452056 248 ntBASIC2.1□□□□□ -2.07
KIAA1549Q9HCM3 AC090515.1-201ENST00000465295 476 ntBASIC2.1□□□□□ -2.07
KIAA1549Q9HCM3 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
KIAA1549Q9HCM3 MTCYBP37-201ENST00000510642 1133 ntBASIC2.1□□□□□ -2.07
KIAA1549Q9HCM3 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.1□□□□□ -2.07
KIAA1549Q9HCM3 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.1□□□□□ -2.07
KIAA1549Q9HCM3 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.1□□□□□ -2.07
KIAA1549Q9HCM3 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.1□□□□□ -2.07
KIAA1549Q9HCM3 AC074029.1-201ENST00000552531 1044 ntBASIC2.1□□□□□ -2.07
KIAA1549Q9HCM3 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
KIAA1549Q9HCM3 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.1□□□□□ -2.07
KIAA1549Q9HCM3 AL354950.1-201ENST00000614150 568 ntBASIC2.1□□□□□ -2.07
KIAA1549Q9HCM3 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.1□□□□□ -2.07
KIAA1549Q9HCM3 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC2.1□□□□□ -2.07
KIAA1549Q9HCM3 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
KIAA1549Q9HCM3 MTND5P6-201ENST00000422338 1798 ntBASIC2.1□□□□□ -2.07
KIAA1549Q9HCM3 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
KIAA1549Q9HCM3 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
KIAA1549Q9HCM3 RNU6-50P-201ENST00000362356 103 ntBASIC2.1□□□□□ -2.07
KIAA1549Q9HCM3 AC109780.2-201ENST00000413467 845 ntBASIC2.1□□□□□ -2.07
KIAA1549Q9HCM3 AL356320.1-201ENST00000429616 163 ntBASIC2.1□□□□□ -2.07
KIAA1549Q9HCM3 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.1□□□□□ -2.07
KIAA1549Q9HCM3 AC023512.1-201ENST00000444513 499 ntBASIC2.1□□□□□ -2.07
KIAA1549Q9HCM3 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC2.1□□□□□ -2.07
KIAA1549Q9HCM3 AC004263.1-201ENST00000479327 332 ntBASIC2.1□□□□□ -2.07
KIAA1549Q9HCM3 AP001317.1-201ENST00000531194 960 ntBASIC2.1□□□□□ -2.07
KIAA1549Q9HCM3 AP002770.2-201ENST00000543613 532 ntBASIC2.1□□□□□ -2.07
KIAA1549Q9HCM3 AL442163.2-201ENST00000553912 710 ntBASIC2.1□□□□□ -2.07
KIAA1549Q9HCM3 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.1□□□□□ -2.07
KIAA1549Q9HCM3 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.1□□□□□ -2.07
KIAA1549Q9HCM3 AC009950.2-201ENST00000636548 183 ntBASIC2.1□□□□□ -2.07
KIAA1549Q9HCM3 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.1□□□□□ -2.07
KIAA1549Q9HCM3 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.1□□□□□ -2.07
KIAA1549Q9HCM3 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.1□□□□□ -2.07
KIAA1549Q9HCM3 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.07
KIAA1549Q9HCM3 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.09□□□□□ -2.07
KIAA1549Q9HCM3 RPS3AP26-201ENST00000398259 784 ntBASIC2.09□□□□□ -2.07
KIAA1549Q9HCM3 AL023284.1-201ENST00000403956 276 ntBASIC2.09□□□□□ -2.07
KIAA1549Q9HCM3 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.09□□□□□ -2.07
KIAA1549Q9HCM3 AC011816.1-201ENST00000441346 546 ntBASIC2.09□□□□□ -2.07
KIAA1549Q9HCM3 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.09□□□□□ -2.07
KIAA1549Q9HCM3 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
KIAA1549Q9HCM3 snoU13.26-201ENST00000459452 105 ntBASIC2.09□□□□□ -2.07
KIAA1549Q9HCM3 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.09□□□□□ -2.07
KIAA1549Q9HCM3 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
KIAA1549Q9HCM3 RNU6-1308P-201ENST00000516817 103 ntBASIC2.09□□□□□ -2.07
KIAA1549Q9HCM3 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.09□□□□□ -2.07
KIAA1549Q9HCM3 OR4R2P-201ENST00000530815 597 ntBASIC2.09□□□□□ -2.07
KIAA1549Q9HCM3 AC090616.5-202ENST00000582111 297 ntBASIC2.09□□□□□ -2.07
KIAA1549Q9HCM3 AC068313.1-201ENST00000604028 1008 ntBASIC2.09□□□□□ -2.07
KIAA1549Q9HCM3 AC010297.1-201ENST00000623948 149 ntBASIC2.09□□□□□ -2.07
KIAA1549Q9HCM3 AL136164.4-201ENST00000625013 2135 ntBASIC2.09□□□□□ -2.07
KIAA1549Q9HCM3 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.09□□□□□ -2.07
KIAA1549Q9HCM3 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.09□□□□□ -2.07
KIAA1549Q9HCM3 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
KIAA1549Q9HCM3 SNORD21-201ENST00000383953 95 ntBASIC2.09□□□□□ -2.08
KIAA1549Q9HCM3 RN7SKP32-201ENST00000410167 303 ntBASIC2.09□□□□□ -2.08
KIAA1549Q9HCM3 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.09□□□□□ -2.08
KIAA1549Q9HCM3 OR51A3P-201ENST00000413596 924 ntBASIC2.09□□□□□ -2.08
KIAA1549Q9HCM3 RPL21P32-201ENST00000419877 477 ntBASIC2.09□□□□□ -2.08
KIAA1549Q9HCM3 AL137014.1-201ENST00000420490 1226 ntBASIC2.09□□□□□ -2.08
KIAA1549Q9HCM3 HMGN2P3-201ENST00000433603 273 ntBASIC2.09□□□□□ -2.08
KIAA1549Q9HCM3 AL590103.1-201ENST00000434488 307 ntBASIC2.09□□□□□ -2.08
KIAA1549Q9HCM3 HMGN2P5-201ENST00000436882 273 ntBASIC2.09□□□□□ -2.08
KIAA1549Q9HCM3 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.09□□□□□ -2.08
KIAA1549Q9HCM3 GTF2IP9-201ENST00000502460 301 ntBASIC2.09□□□□□ -2.08
KIAA1549Q9HCM3 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.09□□□□□ -2.08
KIAA1549Q9HCM3 MTND5P4-201ENST00000514978 288 ntBASIC2.09□□□□□ -2.08
KIAA1549Q9HCM3 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC2.09□□□□□ -2.08
KIAA1549Q9HCM3 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.09□□□□□ -2.08
KIAA1549Q9HCM3 AP003467.2-201ENST00000520175 319 ntBASIC2.09□□□□□ -2.08
KIAA1549Q9HCM3 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.09□□□□□ -2.08
KIAA1549Q9HCM3 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.09□□□□□ -2.08
KIAA1549Q9HCM3 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.09□□□□□ -2.08
KIAA1549Q9HCM3 AC078814.3-201ENST00000553036 491 ntBASIC2.09□□□□□ -2.08
KIAA1549Q9HCM3 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.09□□□□□ -2.08
KIAA1549Q9HCM3 AC090525.3-201ENST00000605601 189 ntBASIC2.09□□□□□ -2.08
KIAA1549Q9HCM3 AC073111.2-201ENST00000605657 1075 ntBASIC2.09□□□□□ -2.08
KIAA1549Q9HCM3 U73479.1-201ENST00000618062 168 ntBASIC2.09□□□□□ -2.08
KIAA1549Q9HCM3 U6.48-201ENST00000618523 106 ntBASIC2.09□□□□□ -2.08
KIAA1549Q9HCM3 CYP3A51P-201ENST00000633513 256 ntBASIC2.09□□□□□ -2.08
KIAA1549Q9HCM3 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
KIAA1549Q9HCM3 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
KIAA1549Q9HCM3 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.08□□□□□ -2.08
KIAA1549Q9HCM3 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
KIAA1549Q9HCM3 AL591416.1-201ENST00000404015 867 ntBASIC2.08□□□□□ -2.08
KIAA1549Q9HCM3 AL139156.1-201ENST00000412785 841 ntBASIC2.08□□□□□ -2.08
KIAA1549Q9HCM3 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC2.08□□□□□ -2.08
KIAA1549Q9HCM3 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.08□□□□□ -2.08
KIAA1549Q9HCM3 HIGD1AP2-201ENST00000446367 280 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms