Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 PRELID3BP8-201ENST00000604148 295 ntBASIC4.73□□□□□ -1.65
VPS11Q9H270 AC246785.4-201ENST00000605374 287 ntBASIC4.73□□□□□ -1.65
VPS11Q9H270 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC4.73□□□□□ -1.65
VPS11Q9H270 AC022467.1-201ENST00000614738 749 ntBASIC4.73□□□□□ -1.65
VPS11Q9H270 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.73□□□□□ -1.65
VPS11Q9H270 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.73□□□□□ -1.65
VPS11Q9H270 AC090971.5-201ENST00000621102 293 ntBASIC4.73□□□□□ -1.65
VPS11Q9H270 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.73□□□□□ -1.65
VPS11Q9H270 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
VPS11Q9H270 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
VPS11Q9H270 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
VPS11Q9H270 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.73□□□□□ -1.65
VPS11Q9H270 AC025031.4-201ENST00000621248 3271 ntBASIC4.73□□□□□ -1.65
VPS11Q9H270 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
VPS11Q9H270 IRF5P1-201ENST00000504852 2164 ntBASIC4.72□□□□□ -1.65
VPS11Q9H270 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VPS11Q9H270 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
VPS11Q9H270 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
VPS11Q9H270 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.72□□□□□ -1.65
VPS11Q9H270 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VPS11Q9H270 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
VPS11Q9H270 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.72□□□□□ -1.65
VPS11Q9H270 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
VPS11Q9H270 RNU6-282P-201ENST00000365357 103 ntBASIC4.72□□□□□ -1.65
VPS11Q9H270 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.72□□□□□ -1.65
VPS11Q9H270 RNU6-809P-201ENST00000384461 107 ntBASIC4.72□□□□□ -1.65
VPS11Q9H270 RPL32P23-201ENST00000397237 405 ntBASIC4.72□□□□□ -1.65
VPS11Q9H270 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VPS11Q9H270 AL356057.3-201ENST00000402607 340 ntBASIC4.72□□□□□ -1.65
VPS11Q9H270 AL049697.2-201ENST00000403708 294 ntBASIC4.72□□□□□ -1.65
VPS11Q9H270 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.72□□□□□ -1.65
VPS11Q9H270 Y_RNA.605-201ENST00000410577 105 ntBASIC4.72□□□□□ -1.65
VPS11Q9H270 Y_RNA.608-201ENST00000410647 95 ntBASIC4.72□□□□□ -1.65
VPS11Q9H270 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC4.72□□□□□ -1.65
VPS11Q9H270 AC069213.2-201ENST00000420238 366 ntBASIC4.72□□□□□ -1.65
VPS11Q9H270 RAD23BP1-201ENST00000421404 1227 ntBASIC4.72□□□□□ -1.65
VPS11Q9H270 EIF4EP1-201ENST00000422311 642 ntBASIC4.72□□□□□ -1.65
VPS11Q9H270 MTCO3P46-201ENST00000425787 232 ntBASIC4.72□□□□□ -1.65
VPS11Q9H270 RPS27AP12-201ENST00000429552 465 ntBASIC4.72□□□□□ -1.65
VPS11Q9H270 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.72□□□□□ -1.65
VPS11Q9H270 BMS1P19-201ENST00000433925 393 ntBASIC4.72□□□□□ -1.65
VPS11Q9H270 AC132479.1-201ENST00000449160 144 ntBASIC4.72□□□□□ -1.65
VPS11Q9H270 Y_RNA.639-201ENST00000458981 102 ntBASIC4.72□□□□□ -1.65
VPS11Q9H270 RPL7P19-201ENST00000469948 618 ntBASIC4.72□□□□□ -1.65
VPS11Q9H270 RPL36AP51-201ENST00000487216 318 ntBASIC4.72□□□□□ -1.65
VPS11Q9H270 RPS15AP36-201ENST00000492022 382 ntBASIC4.72□□□□□ -1.65
VPS11Q9H270 AC140172.1-201ENST00000502928 141 ntBASIC4.72□□□□□ -1.65
VPS11Q9H270 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.72□□□□□ -1.65
VPS11Q9H270 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.72□□□□□ -1.65
VPS11Q9H270 MTCO3P44-201ENST00000510977 541 ntBASIC4.72□□□□□ -1.65
VPS11Q9H270 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VPS11Q9H270 RNA5SP446-201ENST00000515955 82 ntBASIC4.72□□□□□ -1.65
VPS11Q9H270 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.72□□□□□ -1.65
VPS11Q9H270 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.72□□□□□ -1.65
VPS11Q9H270 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VPS11Q9H270 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.72□□□□□ -1.65
VPS11Q9H270 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.72□□□□□ -1.65
VPS11Q9H270 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.72□□□□□ -1.65
VPS11Q9H270 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.72□□□□□ -1.65
VPS11Q9H270 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.72□□□□□ -1.65
VPS11Q9H270 AC007225.2-201ENST00000562529 256 ntBASIC4.72□□□□□ -1.65
VPS11Q9H270 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VPS11Q9H270 MIR5186-201ENST00000577504 120 ntBASIC4.72□□□□□ -1.65
VPS11Q9H270 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.72□□□□□ -1.65
VPS11Q9H270 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.72□□□□□ -1.65
VPS11Q9H270 AL133215.3-201ENST00000609801 448 ntBASIC4.72□□□□□ -1.65
VPS11Q9H270 MIR6826-201ENST00000617808 98 ntBASIC4.72□□□□□ -1.65
VPS11Q9H270 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VPS11Q9H270 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.72□□□□□ -1.65
VPS11Q9H270 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
VPS11Q9H270 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VPS11Q9H270 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VPS11Q9H270 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VPS11Q9H270 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VPS11Q9H270 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.71□□□□□ -1.65
VPS11Q9H270 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
VPS11Q9H270 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.71□□□□□ -1.65
VPS11Q9H270 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.65
VPS11Q9H270 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
VPS11Q9H270 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.71□□□□□ -1.66
VPS11Q9H270 FAM91A3P-201ENST00000456826 2544 ntBASIC4.71□□□□□ -1.66
VPS11Q9H270 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.71□□□□□ -1.66
VPS11Q9H270 MIR369-201ENST00000362155 70 ntBASIC4.71□□□□□ -1.66
VPS11Q9H270 Y_RNA.157-201ENST00000363638 102 ntBASIC4.71□□□□□ -1.66
VPS11Q9H270 RNA5SP28-201ENST00000363841 119 ntBASIC4.71□□□□□ -1.66
VPS11Q9H270 RNU6-43P-201ENST00000384302 107 ntBASIC4.71□□□□□ -1.66
VPS11Q9H270 RNU6-339P-201ENST00000384310 107 ntBASIC4.71□□□□□ -1.66
VPS11Q9H270 MIR568-201ENST00000385036 95 ntBASIC4.71□□□□□ -1.66
VPS11Q9H270 MT-TC-201ENST00000387405 66 ntBASIC4.71□□□□□ -1.66
VPS11Q9H270 Y_RNA.579-201ENST00000390939 94 ntBASIC4.71□□□□□ -1.66
VPS11Q9H270 RN7SKP32-201ENST00000410167 303 ntBASIC4.71□□□□□ -1.66
VPS11Q9H270 RNU2-62P-201ENST00000410868 191 ntBASIC4.71□□□□□ -1.66
VPS11Q9H270 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.71□□□□□ -1.66
VPS11Q9H270 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS11Q9H270 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS11Q9H270 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
VPS11Q9H270 AC113618.1-201ENST00000416747 285 ntBASIC4.71□□□□□ -1.66
VPS11Q9H270 AC012065.2-201ENST00000421295 375 ntBASIC4.71□□□□□ -1.66
VPS11Q9H270 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS11Q9H270 Z82205.1-201ENST00000428456 297 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms