Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
AMBRA1Q9C0C7 AC011460.1-201ENST00000636268 1834 ntBASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 SAGE2P-201ENST00000420011 2126 ntBASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 RNY1P12-201ENST00000364251 105 ntBASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 RNU1-63P-201ENST00000383902 164 ntBASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 RNU6-456P-201ENST00000384493 107 ntBASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 LAP3P1-201ENST00000403648 294 ntBASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 RN7SKP267-201ENST00000410381 285 ntBASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 JKAMPP1-201ENST00000413804 919 ntBASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 AC004987.3-201ENST00000413879 771 ntBASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 ZNF90P2-204ENST00000419323 1075 ntBASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 AL353193.1-201ENST00000421444 268 ntBASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 AC006548.1-201ENST00000427470 102 ntBASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 EZH2P1-201ENST00000431167 291 ntBASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 AC005154.2-201ENST00000438110 379 ntBASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 BX276092.4-201ENST00000452056 248 ntBASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 SCARNA10-201ENST00000459255 330 ntBASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 AC087385.1-201ENST00000475062 312 ntBASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 AC041039.1-201ENST00000485656 536 ntBASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 COX7A2P2-201ENST00000505291 250 ntBASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 OR7H2P-201ENST00000513483 306 ntBASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 RNU6-1281P-201ENST00000516223 105 ntBASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 RN7SKP277-201ENST00000516895 283 ntBASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 AP001880.2-201ENST00000538233 448 ntBASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 MIR3146-201ENST00000580367 79 ntBASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 AC060771.1-201ENST00000582031 164 ntBASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 AL008729.2-201ENST00000606393 473 ntBASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 AC079597.1-201ENST00000624306 508 ntBASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 CR381572.1-201ENST00000625098 102 ntBASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 AC010928.1-201ENST00000592477 1447 ntBASIC4.21□□□□□ -1.74
AMBRA1Q9C0C7 NXPH1-205ENST00000602349 1953 ntBASIC4.2□□□□□ -1.74
AMBRA1Q9C0C7 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.2□□□□□ -1.74
AMBRA1Q9C0C7 AC125257.1-201ENST00000560400 2930 ntBASIC4.2□□□□□ -1.74
AMBRA1Q9C0C7 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
AMBRA1Q9C0C7 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
AMBRA1Q9C0C7 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
AMBRA1Q9C0C7 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
AMBRA1Q9C0C7 Y_RNA.38-201ENST00000362617 102 ntBASIC4.2□□□□□ -1.74
AMBRA1Q9C0C7 RNU6-1322P-201ENST00000364309 107 ntBASIC4.2□□□□□ -1.74
AMBRA1Q9C0C7 RNU6-169P-201ENST00000365336 107 ntBASIC4.2□□□□□ -1.74
AMBRA1Q9C0C7 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
AMBRA1Q9C0C7 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.2□□□□□ -1.74
AMBRA1Q9C0C7 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.2□□□□□ -1.74
AMBRA1Q9C0C7 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC4.2□□□□□ -1.74
AMBRA1Q9C0C7 RPL23AP25-201ENST00000430973 463 ntBASIC4.2□□□□□ -1.74
AMBRA1Q9C0C7 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.2□□□□□ -1.74
AMBRA1Q9C0C7 AL353748.1-201ENST00000440753 474 ntBASIC4.2□□□□□ -1.74
AMBRA1Q9C0C7 MTND4P25-201ENST00000441039 533 ntBASIC4.2□□□□□ -1.74
AMBRA1Q9C0C7 AL353691.1-201ENST00000451332 387 ntBASIC4.2□□□□□ -1.74
AMBRA1Q9C0C7 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.2□□□□□ -1.74
AMBRA1Q9C0C7 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.2□□□□□ -1.74
AMBRA1Q9C0C7 AC026979.1-201ENST00000492525 396 ntBASIC4.2□□□□□ -1.74
AMBRA1Q9C0C7 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
AMBRA1Q9C0C7 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.2□□□□□ -1.74
AMBRA1Q9C0C7 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.2□□□□□ -1.74
AMBRA1Q9C0C7 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.2□□□□□ -1.74
AMBRA1Q9C0C7 AC006499.6-201ENST00000511169 607 ntBASIC4.2□□□□□ -1.74
AMBRA1Q9C0C7 AC046134.1-201ENST00000514454 666 ntBASIC4.2□□□□□ -1.74
AMBRA1Q9C0C7 RN7SKP276-201ENST00000516242 268 ntBASIC4.2□□□□□ -1.74
AMBRA1Q9C0C7 IFITM8P-201ENST00000522529 394 ntBASIC4.2□□□□□ -1.74
AMBRA1Q9C0C7 AC104383.1-201ENST00000530297 370 ntBASIC4.2□□□□□ -1.74
AMBRA1Q9C0C7 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.2□□□□□ -1.74
AMBRA1Q9C0C7 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.2□□□□□ -1.74
AMBRA1Q9C0C7 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.2□□□□□ -1.74
AMBRA1Q9C0C7 AL359212.1-201ENST00000556608 614 ntBASIC4.2□□□□□ -1.74
AMBRA1Q9C0C7 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.2□□□□□ -1.74
AMBRA1Q9C0C7 CYP4A43P-201ENST00000568156 121 ntBASIC4.2□□□□□ -1.74
AMBRA1Q9C0C7 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.2□□□□□ -1.74
AMBRA1Q9C0C7 RN7SL690P-201ENST00000582087 240 ntBASIC4.2□□□□□ -1.74
AMBRA1Q9C0C7 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.2□□□□□ -1.74
AMBRA1Q9C0C7 UBE2L4-201ENST00000587688 464 ntBASIC4.2□□□□□ -1.74
AMBRA1Q9C0C7 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms