Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC2.68□□□□□ -1.98
RSPO3Q9BXY4 SDCBPP3-201ENST00000419629 891 ntBASIC2.68□□□□□ -1.98
RSPO3Q9BXY4 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.68□□□□□ -1.98
RSPO3Q9BXY4 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
RSPO3Q9BXY4 AC112653.1-201ENST00000443851 386 ntBASIC2.68□□□□□ -1.98
RSPO3Q9BXY4 AL035407.2-201ENST00000454090 378 ntBASIC2.68□□□□□ -1.98
RSPO3Q9BXY4 RNU7-140P-201ENST00000459546 60 ntBASIC2.68□□□□□ -1.98
RSPO3Q9BXY4 RPS3AP43-201ENST00000479743 781 ntBASIC2.68□□□□□ -1.98
RSPO3Q9BXY4 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.68□□□□□ -1.98
RSPO3Q9BXY4 AC097462.2-201ENST00000504623 481 ntBASIC2.68□□□□□ -1.98
RSPO3Q9BXY4 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC2.68□□□□□ -1.98
RSPO3Q9BXY4 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC2.68□□□□□ -1.98
RSPO3Q9BXY4 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
RSPO3Q9BXY4 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
RSPO3Q9BXY4 AC087897.1-201ENST00000550134 156 ntBASIC2.68□□□□□ -1.98
RSPO3Q9BXY4 AC011611.5-201ENST00000552477 578 ntBASIC2.68□□□□□ -1.98
RSPO3Q9BXY4 AL121603.1-201ENST00000553815 142 ntBASIC2.68□□□□□ -1.98
RSPO3Q9BXY4 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.68□□□□□ -1.98
RSPO3Q9BXY4 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.68□□□□□ -1.98
RSPO3Q9BXY4 MIR4506-201ENST00000584693 77 ntBASIC2.68□□□□□ -1.98
RSPO3Q9BXY4 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC2.68□□□□□ -1.98
RSPO3Q9BXY4 YWHAQP7-201ENST00000603536 658 ntBASIC2.68□□□□□ -1.98
RSPO3Q9BXY4 RNU4-5P-201ENST00000607255 135 ntBASIC2.68□□□□□ -1.98
RSPO3Q9BXY4 AC009974.1-201ENST00000608881 455 ntBASIC2.68□□□□□ -1.98
RSPO3Q9BXY4 AC090115.4-201ENST00000609970 188 ntBASIC2.68□□□□□ -1.98
RSPO3Q9BXY4 AC008147.4-201ENST00000617570 1204 ntBASIC2.68□□□□□ -1.98
RSPO3Q9BXY4 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.68□□□□□ -1.98
RSPO3Q9BXY4 AC022509.4-201ENST00000621404 572 ntBASIC2.68□□□□□ -1.98
RSPO3Q9BXY4 AC104985.3-201ENST00000623479 597 ntBASIC2.68□□□□□ -1.98
RSPO3Q9BXY4 AL121594.5-201ENST00000631724 573 ntBASIC2.68□□□□□ -1.98
RSPO3Q9BXY4 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
RSPO3Q9BXY4 AC093010.3-201ENST00000570269 15214 ntBASIC2.68□□□□□ -1.98
RSPO3Q9BXY4 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
RSPO3Q9BXY4 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.68□□□□□ -1.98
RSPO3Q9BXY4 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
RSPO3Q9BXY4 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.67□□□□□ -1.98
RSPO3Q9BXY4 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.67□□□□□ -1.98
RSPO3Q9BXY4 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
RSPO3Q9BXY4 RNU6-353P-201ENST00000364266 108 ntBASIC2.67□□□□□ -1.98
RSPO3Q9BXY4 RNU1-101P-201ENST00000391171 127 ntBASIC2.67□□□□□ -1.98
RSPO3Q9BXY4 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RSPO3Q9BXY4 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.67□□□□□ -1.98
RSPO3Q9BXY4 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC2.67□□□□□ -1.98
RSPO3Q9BXY4 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC2.67□□□□□ -1.98
RSPO3Q9BXY4 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.67□□□□□ -1.98
RSPO3Q9BXY4 AC092634.2-201ENST00000428146 1010 ntBASIC2.67□□□□□ -1.98
RSPO3Q9BXY4 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC2.67□□□□□ -1.98
RSPO3Q9BXY4 RPL7P29-201ENST00000437151 728 ntBASIC2.67□□□□□ -1.98
RSPO3Q9BXY4 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC2.67□□□□□ -1.98
RSPO3Q9BXY4 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC2.67□□□□□ -1.98
RSPO3Q9BXY4 AL831737.1-201ENST00000441288 271 ntBASIC2.67□□□□□ -1.98
RSPO3Q9BXY4 AL590399.6-201ENST00000446396 307 ntBASIC2.67□□□□□ -1.98
RSPO3Q9BXY4 AC005002.1-201ENST00000447458 540 ntBASIC2.67□□□□□ -1.98
RSPO3Q9BXY4 AL050341.1-201ENST00000447743 313 ntBASIC2.67□□□□□ -1.98
RSPO3Q9BXY4 OFD1P3Y-201ENST00000453312 783 ntBASIC2.67□□□□□ -1.98
RSPO3Q9BXY4 NECAP1P2-201ENST00000455668 727 ntBASIC2.67□□□□□ -1.98
RSPO3Q9BXY4 AC126121.1-201ENST00000482313 553 ntBASIC2.67□□□□□ -1.98
RSPO3Q9BXY4 AC103975.1-201ENST00000482506 483 ntBASIC2.67□□□□□ -1.98
RSPO3Q9BXY4 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC2.67□□□□□ -1.98
RSPO3Q9BXY4 AC026414.1-201ENST00000504046 698 ntBASIC2.67□□□□□ -1.98
RSPO3Q9BXY4 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC2.67□□□□□ -1.98
RSPO3Q9BXY4 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.67□□□□□ -1.98
RSPO3Q9BXY4 SNORD59.2-201ENST00000516873 68 ntBASIC2.67□□□□□ -1.98
RSPO3Q9BXY4 SNORA31.26-201ENST00000517250 137 ntBASIC2.67□□□□□ -1.98
RSPO3Q9BXY4 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.67□□□□□ -1.98
RSPO3Q9BXY4 PSMA2P1-201ENST00000526365 646 ntBASIC2.67□□□□□ -1.98
RSPO3Q9BXY4 AP002812.4-201ENST00000532139 286 ntBASIC2.67□□□□□ -1.98
RSPO3Q9BXY4 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.67□□□□□ -1.98
RSPO3Q9BXY4 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.67□□□□□ -1.98
RSPO3Q9BXY4 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.67□□□□□ -1.98
RSPO3Q9BXY4 PCNAP1-202ENST00000595299 752 ntBASIC2.67□□□□□ -1.98
RSPO3Q9BXY4 AP002906.1-201ENST00000603405 233 ntBASIC2.67□□□□□ -1.98
RSPO3Q9BXY4 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.67□□□□□ -1.98
RSPO3Q9BXY4 AC073387.2-201ENST00000604797 784 ntBASIC2.67□□□□□ -1.98
RSPO3Q9BXY4 AC024060.1-201ENST00000607052 494 ntBASIC2.67□□□□□ -1.98
RSPO3Q9BXY4 AC063944.3-201ENST00000609969 533 ntBASIC2.67□□□□□ -1.98
RSPO3Q9BXY4 AC107871.2-201ENST00000612894 502 ntBASIC2.67□□□□□ -1.98
RSPO3Q9BXY4 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.67□□□□□ -1.98
RSPO3Q9BXY4 MIR6864-201ENST00000617935 70 ntBASIC2.67□□□□□ -1.98
RSPO3Q9BXY4 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
RSPO3Q9BXY4 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
RSPO3Q9BXY4 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.67□□□□□ -1.98
RSPO3Q9BXY4 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
RSPO3Q9BXY4 MAPK10-322ENST00000641485 4530 ntBASIC2.67□□□□□ -1.98
RSPO3Q9BXY4 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
RSPO3Q9BXY4 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
RSPO3Q9BXY4 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.66□□□□□ -1.98
RSPO3Q9BXY4 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
RSPO3Q9BXY4 RNA5SP391-201ENST00000363456 119 ntBASIC2.66□□□□□ -1.98
RSPO3Q9BXY4 SNORA51.4-201ENST00000364993 124 ntBASIC2.66□□□□□ -1.98
RSPO3Q9BXY4 RNU1-140P-201ENST00000365040 165 ntBASIC2.66□□□□□ -1.98
RSPO3Q9BXY4 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
RSPO3Q9BXY4 AL138880.1-201ENST00000405824 642 ntBASIC2.66□□□□□ -1.98
RSPO3Q9BXY4 RPL5P18-201ENST00000406671 891 ntBASIC2.66□□□□□ -1.98
RSPO3Q9BXY4 RN7SKP58-201ENST00000411010 305 ntBASIC2.66□□□□□ -1.98
RSPO3Q9BXY4 COTL1P1-201ENST00000422309 375 ntBASIC2.66□□□□□ -1.98
RSPO3Q9BXY4 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.66□□□□□ -1.98
RSPO3Q9BXY4 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.66□□□□□ -1.98
RSPO3Q9BXY4 AC127537.2-201ENST00000439258 465 ntBASIC2.66□□□□□ -1.98
RSPO3Q9BXY4 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms