Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 RNU6-593P-201ENST00000364716 112 ntBASIC4.34□□□□□ -1.71
SSBP3Q9BWW4 RNU6-278P-201ENST00000390945 109 ntBASIC4.34□□□□□ -1.71
SSBP3Q9BWW4 AL645927.1-201ENST00000396783 406 ntBASIC4.34□□□□□ -1.71
SSBP3Q9BWW4 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SSBP3Q9BWW4 AC016769.2-201ENST00000414815 475 ntBASIC4.34□□□□□ -1.71
SSBP3Q9BWW4 NRBF2P3-201ENST00000432731 865 ntBASIC4.34□□□□□ -1.71
SSBP3Q9BWW4 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.34□□□□□ -1.71
SSBP3Q9BWW4 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.34□□□□□ -1.71
SSBP3Q9BWW4 GAPDHP58-201ENST00000438477 1006 ntBASIC4.34□□□□□ -1.71
SSBP3Q9BWW4 AC073850.1-201ENST00000449243 255 ntBASIC4.34□□□□□ -1.71
SSBP3Q9BWW4 RN7SL329P-201ENST00000467740 299 ntBASIC4.34□□□□□ -1.71
SSBP3Q9BWW4 RN7SL189P-201ENST00000468631 289 ntBASIC4.34□□□□□ -1.71
SSBP3Q9BWW4 AC104564.1-201ENST00000493028 407 ntBASIC4.34□□□□□ -1.71
SSBP3Q9BWW4 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.34□□□□□ -1.71
SSBP3Q9BWW4 AC097473.1-201ENST00000508142 408 ntBASIC4.34□□□□□ -1.71
SSBP3Q9BWW4 RNA5SP230-201ENST00000517039 122 ntBASIC4.34□□□□□ -1.71
SSBP3Q9BWW4 AC109635.4-202ENST00000531666 412 ntBASIC4.34□□□□□ -1.71
SSBP3Q9BWW4 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.34□□□□□ -1.71
SSBP3Q9BWW4 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.34□□□□□ -1.71
SSBP3Q9BWW4 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.34□□□□□ -1.71
SSBP3Q9BWW4 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.34□□□□□ -1.71
SSBP3Q9BWW4 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.34□□□□□ -1.71
SSBP3Q9BWW4 UBE2L4-201ENST00000587688 464 ntBASIC4.34□□□□□ -1.71
SSBP3Q9BWW4 AC023043.2-201ENST00000589678 1026 ntBASIC4.34□□□□□ -1.71
SSBP3Q9BWW4 AL008729.2-201ENST00000606393 473 ntBASIC4.34□□□□□ -1.71
SSBP3Q9BWW4 AC010424.2-201ENST00000607594 443 ntBASIC4.34□□□□□ -1.71
SSBP3Q9BWW4 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.34□□□□□ -1.71
SSBP3Q9BWW4 AC010632.3-201ENST00000611377 369 ntBASIC4.34□□□□□ -1.71
SSBP3Q9BWW4 PISRT1.1-201ENST00000616930 107 ntBASIC4.34□□□□□ -1.71
SSBP3Q9BWW4 AC068870.2-201ENST00000620635 389 ntBASIC4.34□□□□□ -1.71
SSBP3Q9BWW4 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.34□□□□□ -1.71
SSBP3Q9BWW4 AC000123.2-201ENST00000623124 461 ntBASIC4.34□□□□□ -1.71
SSBP3Q9BWW4 AP002799.1-201ENST00000623552 423 ntBASIC4.34□□□□□ -1.71
SSBP3Q9BWW4 CR392039.4-201ENST00000624968 501 ntBASIC4.34□□□□□ -1.71
SSBP3Q9BWW4 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.34□□□□□ -1.71
SSBP3Q9BWW4 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
SSBP3Q9BWW4 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SSBP3Q9BWW4 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
SSBP3Q9BWW4 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
SSBP3Q9BWW4 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.34□□□□□ -1.71
SSBP3Q9BWW4 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
SSBP3Q9BWW4 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
SSBP3Q9BWW4 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.72
SSBP3Q9BWW4 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.34□□□□□ -1.72
SSBP3Q9BWW4 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
SSBP3Q9BWW4 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
SSBP3Q9BWW4 AC093591.2-201ENST00000565254 3843 ntBASIC4.34□□□□□ -1.72
SSBP3Q9BWW4 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
SSBP3Q9BWW4 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 RNA5SP305-201ENST00000362665 119 ntBASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 RNA5SP258-201ENST00000362750 119 ntBASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 Y_RNA.167-201ENST00000363735 109 ntBASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 Y_RNA.234-201ENST00000364409 97 ntBASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 RNU1-106P-201ENST00000384382 164 ntBASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 EIF4E2P1-201ENST00000393781 255 ntBASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 AL360182.1-201ENST00000397433 468 ntBASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 RNU4-6P-201ENST00000410804 122 ntBASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 OR2AS1P-201ENST00000427827 319 ntBASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 RPL21P133-201ENST00000443666 476 ntBASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 RPL21P23-201ENST00000446654 460 ntBASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 MTND1P17-201ENST00000448961 204 ntBASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 RPS24P6-201ENST00000452670 400 ntBASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 AC021382.1-201ENST00000483523 359 ntBASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 AC006427.1-201ENST00000514359 712 ntBASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 RN7SKP260-201ENST00000516907 149 ntBASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 HMGB1P41-201ENST00000520234 440 ntBASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 AL137161.1-201ENST00000532231 390 ntBASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 RN7SL708P-201ENST00000580952 299 ntBASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 AC011447.4-201ENST00000587562 111 ntBASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 AC103710.2-201ENST00000609912 942 ntBASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 AC062037.2-201ENST00000610137 73 ntBASIC4.33□□□□□ -1.72
SSBP3Q9BWW4 AC011890.2-201ENST00000613393 294 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms