Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.44□□□□□ -1.7
NDC1Q9BTX1 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.44□□□□□ -1.7
NDC1Q9BTX1 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NDC1Q9BTX1 FKBP1BP1-201ENST00000553366 325 ntBASIC4.44□□□□□ -1.7
NDC1Q9BTX1 AC007424.1-203ENST00000554613 687 ntBASIC4.44□□□□□ -1.7
NDC1Q9BTX1 AC055876.1-202ENST00000567053 138 ntBASIC4.44□□□□□ -1.7
NDC1Q9BTX1 AC015917.1-201ENST00000579654 510 ntBASIC4.44□□□□□ -1.7
NDC1Q9BTX1 AC060771.1-201ENST00000582031 164 ntBASIC4.44□□□□□ -1.7
NDC1Q9BTX1 AC069061.3-201ENST00000582254 823 ntBASIC4.44□□□□□ -1.7
NDC1Q9BTX1 AP001429.1-201ENST00000602568 530 ntBASIC4.44□□□□□ -1.7
NDC1Q9BTX1 RPL26P30-202ENST00000602923 645 ntBASIC4.44□□□□□ -1.7
NDC1Q9BTX1 Z84480.1-201ENST00000605131 311 ntBASIC4.44□□□□□ -1.7
NDC1Q9BTX1 AC112204.3-201ENST00000623822 332 ntBASIC4.44□□□□□ -1.7
NDC1Q9BTX1 AC138649.5-201ENST00000637456 137 ntBASIC4.44□□□□□ -1.7
NDC1Q9BTX1 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
NDC1Q9BTX1 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
NDC1Q9BTX1 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
NDC1Q9BTX1 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
NDC1Q9BTX1 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
NDC1Q9BTX1 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
NDC1Q9BTX1 AC011460.1-201ENST00000636268 1834 ntBASIC4.44□□□□□ -1.7
NDC1Q9BTX1 AL445487.1-201ENST00000415694 1580 ntBASIC4.44□□□□□ -1.7
NDC1Q9BTX1 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NDC1Q9BTX1 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NDC1Q9BTX1 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NDC1Q9BTX1 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
NDC1Q9BTX1 DHX9P1-201ENST00000436565 3076 ntBASIC4.43□□□□□ -1.7
NDC1Q9BTX1 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NDC1Q9BTX1 ZNF734P-201ENST00000419494 1534 ntBASIC4.43□□□□□ -1.7
NDC1Q9BTX1 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NDC1Q9BTX1 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NDC1Q9BTX1 RNY1P12-201ENST00000364251 105 ntBASIC4.43□□□□□ -1.7
NDC1Q9BTX1 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
NDC1Q9BTX1 AL592291.1-201ENST00000403830 352 ntBASIC4.43□□□□□ -1.7
NDC1Q9BTX1 RNU6-1068P-201ENST00000410958 103 ntBASIC4.43□□□□□ -1.7
NDC1Q9BTX1 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.43□□□□□ -1.7
NDC1Q9BTX1 AC004987.3-201ENST00000413879 771 ntBASIC4.43□□□□□ -1.7
NDC1Q9BTX1 AC006548.1-201ENST00000427470 102 ntBASIC4.43□□□□□ -1.7
NDC1Q9BTX1 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.43□□□□□ -1.7
NDC1Q9BTX1 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.43□□□□□ -1.7
NDC1Q9BTX1 BNIP3P2-201ENST00000441221 577 ntBASIC4.43□□□□□ -1.7
NDC1Q9BTX1 AC007677.1-201ENST00000445757 515 ntBASIC4.43□□□□□ -1.7
NDC1Q9BTX1 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.43□□□□□ -1.7
NDC1Q9BTX1 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.43□□□□□ -1.7
NDC1Q9BTX1 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.43□□□□□ -1.7
NDC1Q9BTX1 RPL36AP41-201ENST00000493820 306 ntBASIC4.43□□□□□ -1.7
NDC1Q9BTX1 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.43□□□□□ -1.7
NDC1Q9BTX1 RNA5SP401-201ENST00000515920 127 ntBASIC4.43□□□□□ -1.7
NDC1Q9BTX1 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.43□□□□□ -1.7
NDC1Q9BTX1 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.43□□□□□ -1.7
NDC1Q9BTX1 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.43□□□□□ -1.7
NDC1Q9BTX1 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.43□□□□□ -1.7
NDC1Q9BTX1 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.43□□□□□ -1.7
NDC1Q9BTX1 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.43□□□□□ -1.7
NDC1Q9BTX1 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.43□□□□□ -1.7
NDC1Q9BTX1 MIR5096-201ENST00000583713 70 ntBASIC4.43□□□□□ -1.7
NDC1Q9BTX1 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.43□□□□□ -1.7
NDC1Q9BTX1 AC018638.8-201ENST00000588755 281 ntBASIC4.43□□□□□ -1.7
NDC1Q9BTX1 AL158801.5-201ENST00000623123 465 ntBASIC4.43□□□□□ -1.7
NDC1Q9BTX1 FRG1KP-201ENST00000623592 341 ntBASIC4.43□□□□□ -1.7
NDC1Q9BTX1 CR381572.1-201ENST00000625098 102 ntBASIC4.43□□□□□ -1.7
NDC1Q9BTX1 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.43□□□□□ -1.7
NDC1Q9BTX1 AL596275.2-204ENST00000641628 552 ntBASIC4.43□□□□□ -1.7
NDC1Q9BTX1 AL596275.2-206ENST00000641957 626 ntBASIC4.43□□□□□ -1.7
NDC1Q9BTX1 AL157700.1-201ENST00000561973 1432 ntBASIC4.43□□□□□ -1.7
NDC1Q9BTX1 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NDC1Q9BTX1 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
NDC1Q9BTX1 AC027290.2-201ENST00000623210 18662 ntBASIC4.43□□□□□ -1.7
NDC1Q9BTX1 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NDC1Q9BTX1 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
NDC1Q9BTX1 AC026951.1-201ENST00000559530 2459 ntBASIC4.43□□□□□ -1.7
NDC1Q9BTX1 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NDC1Q9BTX1 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
NDC1Q9BTX1 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NDC1Q9BTX1 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
NDC1Q9BTX1 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
NDC1Q9BTX1 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.42□□□□□ -1.7
NDC1Q9BTX1 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.42□□□□□ -1.7
NDC1Q9BTX1 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NDC1Q9BTX1 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.42□□□□□ -1.7
NDC1Q9BTX1 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NDC1Q9BTX1 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.42□□□□□ -1.7
NDC1Q9BTX1 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.42□□□□□ -1.7
NDC1Q9BTX1 AC126755.2-208ENST00000327792 462 ntBASIC4.42□□□□□ -1.7
NDC1Q9BTX1 AC138969.1-213ENST00000331436 462 ntBASIC4.42□□□□□ -1.7
NDC1Q9BTX1 RNY4P16-201ENST00000364768 94 ntBASIC4.42□□□□□ -1.7
NDC1Q9BTX1 SNORD81.2-201ENST00000365153 76 ntBASIC4.42□□□□□ -1.7
NDC1Q9BTX1 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
NDC1Q9BTX1 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
NDC1Q9BTX1 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NDC1Q9BTX1 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NDC1Q9BTX1 RNU2-9P-201ENST00000410194 145 ntBASIC4.42□□□□□ -1.7
NDC1Q9BTX1 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.42□□□□□ -1.7
NDC1Q9BTX1 PDCL2P1-201ENST00000419302 352 ntBASIC4.42□□□□□ -1.7
NDC1Q9BTX1 ELOCP4-201ENST00000420090 333 ntBASIC4.42□□□□□ -1.7
NDC1Q9BTX1 RPL18P10-201ENST00000425606 538 ntBASIC4.42□□□□□ -1.7
NDC1Q9BTX1 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.42□□□□□ -1.7
NDC1Q9BTX1 RPS26P2-201ENST00000440331 348 ntBASIC4.42□□□□□ -1.7
NDC1Q9BTX1 AC016691.1-201ENST00000441321 413 ntBASIC4.42□□□□□ -1.7
NDC1Q9BTX1 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms