Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 AL031176.1-201ENST00000604554 466 ntBASIC3.52□□□□□ -1.85
CPNE1Q99829 AC090186.1-201ENST00000605991 572 ntBASIC3.52□□□□□ -1.85
CPNE1Q99829 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.52□□□□□ -1.85
CPNE1Q99829 AC024560.3-201ENST00000608482 349 ntBASIC3.52□□□□□ -1.85
CPNE1Q99829 AC131159.1-201ENST00000621854 213 ntBASIC3.52□□□□□ -1.85
CPNE1Q99829 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.52□□□□□ -1.85
CPNE1Q99829 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
CPNE1Q99829 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CPNE1Q99829 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
CPNE1Q99829 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CPNE1Q99829 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.51□□□□□ -1.85
CPNE1Q99829 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CPNE1Q99829 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CPNE1Q99829 RPL21P132-201ENST00000331267 462 ntBASIC3.51□□□□□ -1.85
CPNE1Q99829 SNORA70.2-201ENST00000364506 135 ntBASIC3.51□□□□□ -1.85
CPNE1Q99829 RNU6-1074P-201ENST00000383995 104 ntBASIC3.51□□□□□ -1.85
CPNE1Q99829 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CPNE1Q99829 AL590084.2-201ENST00000401481 382 ntBASIC3.51□□□□□ -1.85
CPNE1Q99829 RNU2-47P-201ENST00000410649 186 ntBASIC3.51□□□□□ -1.85
CPNE1Q99829 RNU2-37P-201ENST00000410695 177 ntBASIC3.51□□□□□ -1.85
CPNE1Q99829 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.51□□□□□ -1.85
CPNE1Q99829 MTND5P25-201ENST00000430499 799 ntBASIC3.51□□□□□ -1.85
CPNE1Q99829 VDAC1P3-201ENST00000434069 851 ntBASIC3.51□□□□□ -1.85
CPNE1Q99829 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.51□□□□□ -1.85
CPNE1Q99829 MTND1P31-201ENST00000449206 961 ntBASIC3.51□□□□□ -1.85
CPNE1Q99829 AL136097.1-201ENST00000456945 913 ntBASIC3.51□□□□□ -1.85
CPNE1Q99829 AC021205.2-201ENST00000480069 347 ntBASIC3.51□□□□□ -1.85
CPNE1Q99829 LINC00888-204ENST00000487386 421 ntBASIC3.51□□□□□ -1.85
CPNE1Q99829 UBE2CP3-201ENST00000502715 450 ntBASIC3.51□□□□□ -1.85
CPNE1Q99829 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
CPNE1Q99829 AC110768.1-201ENST00000509222 400 ntBASIC3.51□□□□□ -1.85
CPNE1Q99829 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.51□□□□□ -1.85
CPNE1Q99829 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.51□□□□□ -1.85
CPNE1Q99829 RNU6-1129P-201ENST00000515964 104 ntBASIC3.51□□□□□ -1.85
CPNE1Q99829 RN7SKP244-201ENST00000516513 307 ntBASIC3.51□□□□□ -1.85
CPNE1Q99829 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.51□□□□□ -1.85
CPNE1Q99829 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.51□□□□□ -1.85
CPNE1Q99829 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CPNE1Q99829 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.51□□□□□ -1.85
CPNE1Q99829 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
CPNE1Q99829 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.51□□□□□ -1.85
CPNE1Q99829 AC106791.2-201ENST00000604680 391 ntBASIC3.51□□□□□ -1.85
CPNE1Q99829 AC006023.2-201ENST00000609916 167 ntBASIC3.51□□□□□ -1.85
CPNE1Q99829 MIR378J-201ENST00000611988 109 ntBASIC3.51□□□□□ -1.85
CPNE1Q99829 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.51□□□□□ -1.85
CPNE1Q99829 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.51□□□□□ -1.85
CPNE1Q99829 AC079416.3-201ENST00000624479 549 ntBASIC3.51□□□□□ -1.85
CPNE1Q99829 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CPNE1Q99829 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CPNE1Q99829 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CPNE1Q99829 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CPNE1Q99829 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
CPNE1Q99829 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CPNE1Q99829 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CPNE1Q99829 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
CPNE1Q99829 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.5□□□□□ -1.85
CPNE1Q99829 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CPNE1Q99829 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.5□□□□□ -1.85
CPNE1Q99829 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
CPNE1Q99829 AL645937.1-201ENST00000641739 1652 ntBASIC3.5□□□□□ -1.85
CPNE1Q99829 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
CPNE1Q99829 AL513302.2-201ENST00000562313 1842 ntBASIC3.5□□□□□ -1.85
CPNE1Q99829 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
CPNE1Q99829 Y_RNA.18-201ENST00000362461 102 ntBASIC3.5□□□□□ -1.85
CPNE1Q99829 RNU6-1155P-201ENST00000363554 107 ntBASIC3.5□□□□□ -1.85
CPNE1Q99829 RNU6-289P-201ENST00000364093 107 ntBASIC3.5□□□□□ -1.85
CPNE1Q99829 Y_RNA.234-201ENST00000364409 97 ntBASIC3.5□□□□□ -1.85
CPNE1Q99829 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CPNE1Q99829 RNU6-723P-201ENST00000383973 107 ntBASIC3.5□□□□□ -1.85
CPNE1Q99829 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CPNE1Q99829 MIR320C1-201ENST00000408566 88 ntBASIC3.5□□□□□ -1.85
CPNE1Q99829 ATP5A1P2-201ENST00000412323 255 ntBASIC3.5□□□□□ -1.85
CPNE1Q99829 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.5□□□□□ -1.85
CPNE1Q99829 AC092447.3-201ENST00000426027 686 ntBASIC3.5□□□□□ -1.85
CPNE1Q99829 RPS29P7-201ENST00000439662 171 ntBASIC3.5□□□□□ -1.85
CPNE1Q99829 AL591503.2-201ENST00000442314 1005 ntBASIC3.5□□□□□ -1.85
CPNE1Q99829 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.5□□□□□ -1.85
CPNE1Q99829 MTCO1P27-201ENST00000448269 226 ntBASIC3.5□□□□□ -1.85
CPNE1Q99829 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.5□□□□□ -1.85
CPNE1Q99829 RPS4XP2-201ENST00000458402 793 ntBASIC3.5□□□□□ -1.85
CPNE1Q99829 RPL9P32-201ENST00000464118 620 ntBASIC3.5□□□□□ -1.85
CPNE1Q99829 RPL23AP67-201ENST00000465341 474 ntBASIC3.5□□□□□ -1.85
CPNE1Q99829 AC093278.1-201ENST00000494700 600 ntBASIC3.5□□□□□ -1.85
CPNE1Q99829 AC096751.1-202ENST00000502691 1067 ntBASIC3.5□□□□□ -1.85
CPNE1Q99829 AC093809.1-201ENST00000509155 340 ntBASIC3.5□□□□□ -1.85
CPNE1Q99829 HSPE1P23-201ENST00000509838 286 ntBASIC3.5□□□□□ -1.85
CPNE1Q99829 AC004062.1-201ENST00000509926 645 ntBASIC3.5□□□□□ -1.85
CPNE1Q99829 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.5□□□□□ -1.85
CPNE1Q99829 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.5□□□□□ -1.85
CPNE1Q99829 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.5□□□□□ -1.85
CPNE1Q99829 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.5□□□□□ -1.85
CPNE1Q99829 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.5□□□□□ -1.85
CPNE1Q99829 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
CPNE1Q99829 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
CPNE1Q99829 OR7K1P-201ENST00000546439 926 ntBASIC3.5□□□□□ -1.85
CPNE1Q99829 HSPE1P5-201ENST00000561489 272 ntBASIC3.5□□□□□ -1.85
CPNE1Q99829 AC136624.4-201ENST00000573044 370 ntBASIC3.5□□□□□ -1.85
CPNE1Q99829 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.5□□□□□ -1.85
CPNE1Q99829 AC136618.2-201ENST00000575091 400 ntBASIC3.5□□□□□ -1.85
CPNE1Q99829 MIR3690-201ENST00000580266 75 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms