Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 MRPS18BP2-201ENST00000434310 759 ntBASIC3.82□□□□□ -1.8
PKP4Q99569 UBE2FP3-201ENST00000436366 524 ntBASIC3.82□□□□□ -1.8
PKP4Q99569 AL512286.1-201ENST00000439244 400 ntBASIC3.82□□□□□ -1.8
PKP4Q99569 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.82□□□□□ -1.8
PKP4Q99569 COX6CP12-201ENST00000446748 202 ntBASIC3.82□□□□□ -1.8
PKP4Q99569 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.82□□□□□ -1.8
PKP4Q99569 AC022034.3-201ENST00000471393 478 ntBASIC3.82□□□□□ -1.8
PKP4Q99569 AC103987.1-201ENST00000473394 348 ntBASIC3.82□□□□□ -1.8
PKP4Q99569 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.82□□□□□ -1.8
PKP4Q99569 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.82□□□□□ -1.8
PKP4Q99569 RPL7P47-201ENST00000497299 556 ntBASIC3.82□□□□□ -1.8
PKP4Q99569 ARL2BPP4-201ENST00000506854 471 ntBASIC3.82□□□□□ -1.8
PKP4Q99569 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.82□□□□□ -1.8
PKP4Q99569 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PKP4Q99569 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.82□□□□□ -1.8
PKP4Q99569 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.82□□□□□ -1.8
PKP4Q99569 MIR2116-201ENST00000517221 80 ntBASIC3.82□□□□□ -1.8
PKP4Q99569 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
PKP4Q99569 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.82□□□□□ -1.8
PKP4Q99569 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.82□□□□□ -1.8
PKP4Q99569 AC120057.2-201ENST00000571520 271 ntBASIC3.82□□□□□ -1.8
PKP4Q99569 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.82□□□□□ -1.8
PKP4Q99569 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.82□□□□□ -1.8
PKP4Q99569 MIR3690-201ENST00000580266 75 ntBASIC3.82□□□□□ -1.8
PKP4Q99569 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.82□□□□□ -1.8
PKP4Q99569 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.82□□□□□ -1.8
PKP4Q99569 AC025588.3-201ENST00000604182 274 ntBASIC3.82□□□□□ -1.8
PKP4Q99569 NDUFA8P1-201ENST00000605525 367 ntBASIC3.82□□□□□ -1.8
PKP4Q99569 AC108747.1-201ENST00000609508 535 ntBASIC3.82□□□□□ -1.8
PKP4Q99569 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.82□□□□□ -1.8
PKP4Q99569 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
PKP4Q99569 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
PKP4Q99569 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
PKP4Q99569 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.81□□□□□ -1.8
PKP4Q99569 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PKP4Q99569 AC092447.7-201ENST00000422212 1621 ntBASIC3.81□□□□□ -1.8
PKP4Q99569 CR383658.2-201ENST00000547576 1525 ntBASIC3.81□□□□□ -1.8
PKP4Q99569 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PKP4Q99569 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PKP4Q99569 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PKP4Q99569 Y_RNA.25-201ENST00000362528 102 ntBASIC3.81□□□□□ -1.8
PKP4Q99569 RNA5SP88-201ENST00000365560 109 ntBASIC3.81□□□□□ -1.8
PKP4Q99569 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.81□□□□□ -1.8
PKP4Q99569 RNU6-761P-201ENST00000384148 107 ntBASIC3.81□□□□□ -1.8
PKP4Q99569 AL583834.1-201ENST00000406943 343 ntBASIC3.81□□□□□ -1.8
PKP4Q99569 RPS7P13-201ENST00000413955 498 ntBASIC3.81□□□□□ -1.8
PKP4Q99569 FCF1P2-201ENST00000415284 583 ntBASIC3.81□□□□□ -1.8
PKP4Q99569 MTCYBP38-201ENST00000417160 1123 ntBASIC3.81□□□□□ -1.8
PKP4Q99569 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.81□□□□□ -1.8
PKP4Q99569 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.81□□□□□ -1.8
PKP4Q99569 AC087650.1-201ENST00000431445 468 ntBASIC3.81□□□□□ -1.8
PKP4Q99569 LARP1BP3-201ENST00000437229 869 ntBASIC3.81□□□□□ -1.8
PKP4Q99569 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.81□□□□□ -1.8
PKP4Q99569 RPL21P89-201ENST00000444021 467 ntBASIC3.81□□□□□ -1.8
PKP4Q99569 AC239367.2-201ENST00000447309 705 ntBASIC3.81□□□□□ -1.8
PKP4Q99569 HMGB3P22-202ENST00000451823 572 ntBASIC3.81□□□□□ -1.8
PKP4Q99569 RPS24P6-201ENST00000452670 400 ntBASIC3.81□□□□□ -1.8
PKP4Q99569 SSXP1-201ENST00000453640 473 ntBASIC3.81□□□□□ -1.8
PKP4Q99569 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.81□□□□□ -1.8
PKP4Q99569 RNU7-170P-201ENST00000459303 61 ntBASIC3.81□□□□□ -1.8
PKP4Q99569 RPL21P104-201ENST00000464143 478 ntBASIC3.81□□□□□ -1.8
PKP4Q99569 PPIAP15-201ENST00000479662 484 ntBASIC3.81□□□□□ -1.8
PKP4Q99569 AC108078.3-201ENST00000502633 489 ntBASIC3.81□□□□□ -1.8
PKP4Q99569 HMGB1P22-201ENST00000505315 124 ntBASIC3.81□□□□□ -1.8
PKP4Q99569 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.81□□□□□ -1.8
PKP4Q99569 HMGB1P28-201ENST00000507778 552 ntBASIC3.81□□□□□ -1.8
PKP4Q99569 RNY4P37-201ENST00000516225 96 ntBASIC3.81□□□□□ -1.8
PKP4Q99569 MTND4LP26-201ENST00000518144 282 ntBASIC3.81□□□□□ -1.8
PKP4Q99569 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.81□□□□□ -1.8
PKP4Q99569 SLC2A13P1-201ENST00000531560 322 ntBASIC3.81□□□□□ -1.8
PKP4Q99569 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
PKP4Q99569 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.81□□□□□ -1.8
PKP4Q99569 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
PKP4Q99569 PCMTD1P2-201ENST00000565017 355 ntBASIC3.81□□□□□ -1.8
PKP4Q99569 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.81□□□□□ -1.8
PKP4Q99569 MTND1P15-201ENST00000579262 949 ntBASIC3.81□□□□□ -1.8
PKP4Q99569 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.81□□□□□ -1.8
PKP4Q99569 SNORD39.3-201ENST00000584451 71 ntBASIC3.81□□□□□ -1.8
PKP4Q99569 AC091805.2-201ENST00000603848 235 ntBASIC3.81□□□□□ -1.8
PKP4Q99569 AL592436.1-201ENST00000605135 558 ntBASIC3.81□□□□□ -1.8
PKP4Q99569 AC022306.2-201ENST00000617563 647 ntBASIC3.81□□□□□ -1.8
PKP4Q99569 AC103858.2-201ENST00000621471 543 ntBASIC3.81□□□□□ -1.8
PKP4Q99569 MIR4727-201ENST00000622232 55 ntBASIC3.81□□□□□ -1.8
PKP4Q99569 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.81□□□□□ -1.8
PKP4Q99569 AC026634.1-201ENST00000634369 198 ntBASIC3.81□□□□□ -1.8
PKP4Q99569 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
PKP4Q99569 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
PKP4Q99569 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.81□□□□□ -1.8
PKP4Q99569 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PKP4Q99569 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PKP4Q99569 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
PKP4Q99569 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
PKP4Q99569 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PKP4Q99569 MTCO1P23-201ENST00000415223 1526 ntBASIC3.8□□□□□ -1.8
PKP4Q99569 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PKP4Q99569 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.8□□□□□ -1.8
PKP4Q99569 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.8□□□□□ -1.8
PKP4Q99569 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.8□□□□□ -1.8
PKP4Q99569 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PKP4Q99569 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms