Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 SKA2P1-201ENST00000425592 390 ntBASIC6.33□□□□□ -1.4
CCDC85AQ96PX6 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC6.33□□□□□ -1.4
CCDC85AQ96PX6 AC005019.1-201ENST00000436455 431 ntBASIC6.33□□□□□ -1.4
CCDC85AQ96PX6 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC6.33□□□□□ -1.4
CCDC85AQ96PX6 AC104058.1-201ENST00000448028 297 ntBASIC6.33□□□□□ -1.4
CCDC85AQ96PX6 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC6.33□□□□□ -1.4
CCDC85AQ96PX6 AC243772.1-201ENST00000451620 410 ntBASIC6.33□□□□□ -1.4
CCDC85AQ96PX6 AL354710.1-201ENST00000453641 246 ntBASIC6.33□□□□□ -1.4
CCDC85AQ96PX6 AL162395.1-201ENST00000457882 422 ntBASIC6.33□□□□□ -1.4
CCDC85AQ96PX6 SNORD121B-201ENST00000458838 81 ntBASIC6.33□□□□□ -1.4
CCDC85AQ96PX6 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC6.33□□□□□ -1.4
CCDC85AQ96PX6 RN7SL443P-201ENST00000464331 290 ntBASIC6.33□□□□□ -1.4
CCDC85AQ96PX6 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC6.33□□□□□ -1.4
CCDC85AQ96PX6 AC016559.2-201ENST00000510759 359 ntBASIC6.33□□□□□ -1.4
CCDC85AQ96PX6 RNU6-347P-201ENST00000516658 105 ntBASIC6.33□□□□□ -1.4
CCDC85AQ96PX6 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC6.33□□□□□ -1.4
CCDC85AQ96PX6 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC6.33□□□□□ -1.4
CCDC85AQ96PX6 BNIP3P1-201ENST00000547295 580 ntBASIC6.33□□□□□ -1.4
CCDC85AQ96PX6 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC6.33□□□□□ -1.4
CCDC85AQ96PX6 MTCO3P23-201ENST00000561363 289 ntBASIC6.33□□□□□ -1.4
CCDC85AQ96PX6 AC138761.3-201ENST00000579993 334 ntBASIC6.33□□□□□ -1.4
CCDC85AQ96PX6 MIR3672-201ENST00000584290 82 ntBASIC6.33□□□□□ -1.4
CCDC85AQ96PX6 MIR6798-201ENST00000612887 67 ntBASIC6.33□□□□□ -1.4
CCDC85AQ96PX6 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC6.33□□□□□ -1.4
CCDC85AQ96PX6 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.33□□□□□ -1.4
CCDC85AQ96PX6 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC85AQ96PX6 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC85AQ96PX6 ZNF807-201ENST00000328088 1707 ntBASIC6.33□□□□□ -1.4
CCDC85AQ96PX6 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC85AQ96PX6 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
CCDC85AQ96PX6 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
CCDC85AQ96PX6 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.32□□□□□ -1.4
CCDC85AQ96PX6 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC85AQ96PX6 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC6.32□□□□□ -1.4
CCDC85AQ96PX6 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC85AQ96PX6 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC85AQ96PX6 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC85AQ96PX6 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC85AQ96PX6 Y_RNA.5-201ENST00000362334 102 ntBASIC6.32□□□□□ -1.4
CCDC85AQ96PX6 RNU6-1115P-201ENST00000362490 106 ntBASIC6.32□□□□□ -1.4
CCDC85AQ96PX6 Y_RNA.557-201ENST00000384680 107 ntBASIC6.32□□□□□ -1.4
CCDC85AQ96PX6 AL136372.1-201ENST00000403060 228 ntBASIC6.32□□□□□ -1.4
CCDC85AQ96PX6 RPL7P10-201ENST00000417407 739 ntBASIC6.32□□□□□ -1.4
CCDC85AQ96PX6 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC6.32□□□□□ -1.4
CCDC85AQ96PX6 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC6.32□□□□□ -1.4
CCDC85AQ96PX6 MIR2053-201ENST00000459295 91 ntBASIC6.32□□□□□ -1.4
CCDC85AQ96PX6 AC006967.1-201ENST00000467608 589 ntBASIC6.32□□□□□ -1.4
CCDC85AQ96PX6 RN7SL319P-201ENST00000480656 221 ntBASIC6.32□□□□□ -1.4
CCDC85AQ96PX6 RN7SL809P-201ENST00000482040 297 ntBASIC6.32□□□□□ -1.4
CCDC85AQ96PX6 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
CCDC85AQ96PX6 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.32□□□□□ -1.4
CCDC85AQ96PX6 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC6.32□□□□□ -1.4
CCDC85AQ96PX6 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC6.32□□□□□ -1.4
CCDC85AQ96PX6 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC6.32□□□□□ -1.4
CCDC85AQ96PX6 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC6.32□□□□□ -1.4
CCDC85AQ96PX6 AC092747.3-201ENST00000603769 301 ntBASIC6.32□□□□□ -1.4
CCDC85AQ96PX6 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC6.32□□□□□ -1.4
CCDC85AQ96PX6 AC055839.1-201ENST00000634467 498 ntBASIC6.32□□□□□ -1.4
CCDC85AQ96PX6 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC85AQ96PX6 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC6.32□□□□□ -1.4
CCDC85AQ96PX6 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC85AQ96PX6 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC85AQ96PX6 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC85AQ96PX6 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC85AQ96PX6 AP002512.4-202ENST00000641599 4530 ntBASIC6.32□□□□□ -1.4
CCDC85AQ96PX6 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC85AQ96PX6 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC85AQ96PX6 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.32□□□□□ -1.4
CCDC85AQ96PX6 ERVFRD-3-201ENST00000578561 1617 ntBASIC6.32□□□□□ -1.4
CCDC85AQ96PX6 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
CCDC85AQ96PX6 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
CCDC85AQ96PX6 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC85AQ96PX6 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC85AQ96PX6 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CCDC85AQ96PX6 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC85AQ96PX6 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC6.31□□□□□ -1.4
CCDC85AQ96PX6 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC85AQ96PX6 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC85AQ96PX6 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC85AQ96PX6 RN7SKP145-201ENST00000363291 303 ntBASIC6.31□□□□□ -1.4
CCDC85AQ96PX6 RNA5SP223-201ENST00000365174 120 ntBASIC6.31□□□□□ -1.4
CCDC85AQ96PX6 RNU6-784P-201ENST00000384330 106 ntBASIC6.31□□□□□ -1.4
CCDC85AQ96PX6 RNU6-310P-201ENST00000384655 107 ntBASIC6.31□□□□□ -1.4
CCDC85AQ96PX6 UBE2V1P2-201ENST00000397758 440 ntBASIC6.31□□□□□ -1.4
CCDC85AQ96PX6 RNU4-46P-201ENST00000410818 138 ntBASIC6.31□□□□□ -1.4
CCDC85AQ96PX6 BX323014.1-201ENST00000412876 237 ntBASIC6.31□□□□□ -1.4
CCDC85AQ96PX6 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC85AQ96PX6 AC009302.1-201ENST00000417147 390 ntBASIC6.31□□□□□ -1.4
CCDC85AQ96PX6 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC6.31□□□□□ -1.4
CCDC85AQ96PX6 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC6.31□□□□□ -1.4
CCDC85AQ96PX6 FHP1-201ENST00000442741 703 ntBASIC6.31□□□□□ -1.4
CCDC85AQ96PX6 AL031584.1-201ENST00000447169 754 ntBASIC6.31□□□□□ -1.4
CCDC85AQ96PX6 AC020550.1-201ENST00000447385 163 ntBASIC6.31□□□□□ -1.4
CCDC85AQ96PX6 MTATP8P1-201ENST00000467115 207 ntBASIC6.31□□□□□ -1.4
CCDC85AQ96PX6 RPL7P43-201ENST00000478876 753 ntBASIC6.31□□□□□ -1.4
CCDC85AQ96PX6 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC6.31□□□□□ -1.4
CCDC85AQ96PX6 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC6.31□□□□□ -1.4
CCDC85AQ96PX6 MYL12BP1-201ENST00000569826 507 ntBASIC6.31□□□□□ -1.4
CCDC85AQ96PX6 MIR4330-201ENST00000579077 105 ntBASIC6.31□□□□□ -1.4
CCDC85AQ96PX6 AC006363.1-201ENST00000603806 463 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms