Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC2.94□□□□□ -1.94
ECHDC3Q96DC8 AC112518.2-201ENST00000508565 425 ntBASIC2.94□□□□□ -1.94
ECHDC3Q96DC8 AC118282.2-201ENST00000508739 374 ntBASIC2.94□□□□□ -1.94
ECHDC3Q96DC8 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.94□□□□□ -1.94
ECHDC3Q96DC8 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.94□□□□□ -1.94
ECHDC3Q96DC8 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.94□□□□□ -1.94
ECHDC3Q96DC8 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.94□□□□□ -1.94
ECHDC3Q96DC8 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.94□□□□□ -1.94
ECHDC3Q96DC8 AC010653.1-201ENST00000571108 881 ntBASIC2.94□□□□□ -1.94
ECHDC3Q96DC8 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.94□□□□□ -1.94
ECHDC3Q96DC8 AC128687.1-201ENST00000605304 619 ntBASIC2.94□□□□□ -1.94
ECHDC3Q96DC8 AL160281.1-201ENST00000605307 311 ntBASIC2.94□□□□□ -1.94
ECHDC3Q96DC8 AL021368.1-201ENST00000607490 540 ntBASIC2.94□□□□□ -1.94
ECHDC3Q96DC8 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.94□□□□□ -1.94
ECHDC3Q96DC8 AC091948.2-201ENST00000636510 279 ntBASIC2.94□□□□□ -1.94
ECHDC3Q96DC8 AL590396.4-201ENST00000636779 956 ntBASIC2.94□□□□□ -1.94
ECHDC3Q96DC8 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
ECHDC3Q96DC8 AC244517.1-201ENST00000606030 2086 ntBASIC2.93□□□□□ -1.94
ECHDC3Q96DC8 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.93□□□□□ -1.94
ECHDC3Q96DC8 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
ECHDC3Q96DC8 RNU6-549P-201ENST00000384433 107 ntBASIC2.93□□□□□ -1.94
ECHDC3Q96DC8 SNORD116-23-201ENST00000384645 92 ntBASIC2.93□□□□□ -1.94
ECHDC3Q96DC8 MTCO2P31-201ENST00000402702 684 ntBASIC2.93□□□□□ -1.94
ECHDC3Q96DC8 NDUFB4P4-201ENST00000404822 243 ntBASIC2.93□□□□□ -1.94
ECHDC3Q96DC8 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.93□□□□□ -1.94
ECHDC3Q96DC8 EEF1A1P41-201ENST00000414667 207 ntBASIC2.93□□□□□ -1.94
ECHDC3Q96DC8 AC233728.2-201ENST00000425348 757 ntBASIC2.93□□□□□ -1.94
ECHDC3Q96DC8 AL162389.1-201ENST00000449233 177 ntBASIC2.93□□□□□ -1.94
ECHDC3Q96DC8 TRBV26-201ENST00000456572 344 ntBASIC2.93□□□□□ -1.94
ECHDC3Q96DC8 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.93□□□□□ -1.94
ECHDC3Q96DC8 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC2.93□□□□□ -1.94
ECHDC3Q96DC8 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
ECHDC3Q96DC8 AC105914.1-201ENST00000511798 226 ntBASIC2.93□□□□□ -1.94
ECHDC3Q96DC8 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.93□□□□□ -1.94
ECHDC3Q96DC8 ERHP1-201ENST00000523006 310 ntBASIC2.93□□□□□ -1.94
ECHDC3Q96DC8 AC007536.1-201ENST00000533382 349 ntBASIC2.93□□□□□ -1.94
ECHDC3Q96DC8 LSM6P2-201ENST00000552208 177 ntBASIC2.93□□□□□ -1.94
ECHDC3Q96DC8 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.93□□□□□ -1.94
ECHDC3Q96DC8 AC034105.3-201ENST00000565294 442 ntBASIC2.93□□□□□ -1.94
ECHDC3Q96DC8 AC011471.1-201ENST00000585766 187 ntBASIC2.93□□□□□ -1.94
ECHDC3Q96DC8 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
ECHDC3Q96DC8 AC131902.3-201ENST00000611767 581 ntBASIC2.93□□□□□ -1.94
ECHDC3Q96DC8 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.93□□□□□ -1.94
ECHDC3Q96DC8 AC002076.2-201ENST00000617362 122 ntBASIC2.93□□□□□ -1.94
ECHDC3Q96DC8 AC073592.7-201ENST00000623659 507 ntBASIC2.93□□□□□ -1.94
ECHDC3Q96DC8 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.93□□□□□ -1.94
ECHDC3Q96DC8 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.93□□□□□ -1.94
ECHDC3Q96DC8 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
ECHDC3Q96DC8 AC103988.1-201ENST00000566382 2177 ntBASIC2.93□□□□□ -1.94
ECHDC3Q96DC8 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.92□□□□□ -1.94
ECHDC3Q96DC8 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
ECHDC3Q96DC8 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.92□□□□□ -1.94
ECHDC3Q96DC8 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
ECHDC3Q96DC8 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
ECHDC3Q96DC8 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.92□□□□□ -1.94
ECHDC3Q96DC8 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.92□□□□□ -1.94
ECHDC3Q96DC8 AL512283.1-201ENST00000606756 1384 ntBASIC2.92□□□□□ -1.94
ECHDC3Q96DC8 RNU6-115P-201ENST00000364310 107 ntBASIC2.92□□□□□ -1.94
ECHDC3Q96DC8 MIR23A-201ENST00000385245 73 ntBASIC2.92□□□□□ -1.94
ECHDC3Q96DC8 RPL22P22-201ENST00000395439 379 ntBASIC2.92□□□□□ -1.94
ECHDC3Q96DC8 RN7SKP123-201ENST00000410732 291 ntBASIC2.92□□□□□ -1.94
ECHDC3Q96DC8 SDCBPP3-201ENST00000419629 891 ntBASIC2.92□□□□□ -1.94
ECHDC3Q96DC8 SFR1P2-201ENST00000421841 730 ntBASIC2.92□□□□□ -1.94
ECHDC3Q96DC8 UBE2D3P3-201ENST00000426992 425 ntBASIC2.92□□□□□ -1.94
ECHDC3Q96DC8 AL035410.1-201ENST00000427409 427 ntBASIC2.92□□□□□ -1.94
ECHDC3Q96DC8 MTATP6P4-201ENST00000427725 675 ntBASIC2.92□□□□□ -1.94
ECHDC3Q96DC8 AC104332.2-201ENST00000429959 156 ntBASIC2.92□□□□□ -1.94
ECHDC3Q96DC8 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.92□□□□□ -1.94
ECHDC3Q96DC8 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.92□□□□□ -1.94
ECHDC3Q96DC8 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.92□□□□□ -1.94
ECHDC3Q96DC8 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.92□□□□□ -1.94
ECHDC3Q96DC8 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.92□□□□□ -1.94
ECHDC3Q96DC8 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.92□□□□□ -1.94
ECHDC3Q96DC8 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC2.92□□□□□ -1.94
ECHDC3Q96DC8 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.92□□□□□ -1.94
ECHDC3Q96DC8 AL590639.1-201ENST00000456484 337 ntBASIC2.92□□□□□ -1.94
ECHDC3Q96DC8 MTCO3P2-201ENST00000457365 171 ntBASIC2.92□□□□□ -1.94
ECHDC3Q96DC8 RN7SL75P-201ENST00000461926 281 ntBASIC2.92□□□□□ -1.94
ECHDC3Q96DC8 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
ECHDC3Q96DC8 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
ECHDC3Q96DC8 AC097462.2-201ENST00000504623 481 ntBASIC2.92□□□□□ -1.94
ECHDC3Q96DC8 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
ECHDC3Q96DC8 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
ECHDC3Q96DC8 AC048346.1-201ENST00000510247 144 ntBASIC2.92□□□□□ -1.94
ECHDC3Q96DC8 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
ECHDC3Q96DC8 RNA5SP135-201ENST00000517019 125 ntBASIC2.92□□□□□ -1.94
ECHDC3Q96DC8 ARL2BPP5-201ENST00000523141 481 ntBASIC2.92□□□□□ -1.94
ECHDC3Q96DC8 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.92□□□□□ -1.94
ECHDC3Q96DC8 EIF4BP1-201ENST00000554881 351 ntBASIC2.92□□□□□ -1.94
ECHDC3Q96DC8 MIR4789-201ENST00000577469 82 ntBASIC2.92□□□□□ -1.94
ECHDC3Q96DC8 MIR4666A-201ENST00000580160 79 ntBASIC2.92□□□□□ -1.94
ECHDC3Q96DC8 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.92□□□□□ -1.94
ECHDC3Q96DC8 MAGOH2P-202ENST00000584384 429 ntBASIC2.92□□□□□ -1.94
ECHDC3Q96DC8 AC092474.3-201ENST00000603022 568 ntBASIC2.92□□□□□ -1.94
ECHDC3Q96DC8 BX649567.1-201ENST00000642071 1134 ntBASIC2.92□□□□□ -1.94
ECHDC3Q96DC8 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
ECHDC3Q96DC8 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
ECHDC3Q96DC8 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
ECHDC3Q96DC8 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
ECHDC3Q96DC8 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms