Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.87□□□□□ -1.63
CHMP4CQ96CF2 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CHMP4CQ96CF2 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CHMP4CQ96CF2 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.87□□□□□ -1.63
CHMP4CQ96CF2 SNORD116-4-201ENST00000384733 96 ntBASIC4.87□□□□□ -1.63
CHMP4CQ96CF2 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CHMP4CQ96CF2 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.87□□□□□ -1.63
CHMP4CQ96CF2 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.87□□□□□ -1.63
CHMP4CQ96CF2 AL356583.2-201ENST00000426536 280 ntBASIC4.87□□□□□ -1.63
CHMP4CQ96CF2 NANOGP6-201ENST00000429190 847 ntBASIC4.87□□□□□ -1.63
CHMP4CQ96CF2 AL589823.1-201ENST00000429577 183 ntBASIC4.87□□□□□ -1.63
CHMP4CQ96CF2 TBCAP1-201ENST00000436520 327 ntBASIC4.87□□□□□ -1.63
CHMP4CQ96CF2 AC091862.1-201ENST00000438016 1100 ntBASIC4.87□□□□□ -1.63
CHMP4CQ96CF2 RPS29P7-201ENST00000439662 171 ntBASIC4.87□□□□□ -1.63
CHMP4CQ96CF2 MTND1P27-201ENST00000451117 902 ntBASIC4.87□□□□□ -1.63
CHMP4CQ96CF2 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.87□□□□□ -1.63
CHMP4CQ96CF2 DEFB109D-201ENST00000529497 240 ntBASIC4.87□□□□□ -1.63
CHMP4CQ96CF2 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.87□□□□□ -1.63
CHMP4CQ96CF2 SETP7-201ENST00000552169 453 ntBASIC4.87□□□□□ -1.63
CHMP4CQ96CF2 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.87□□□□□ -1.63
CHMP4CQ96CF2 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.87□□□□□ -1.63
CHMP4CQ96CF2 AC012213.3-201ENST00000577199 777 ntBASIC4.87□□□□□ -1.63
CHMP4CQ96CF2 AC025946.2-201ENST00000603398 234 ntBASIC4.87□□□□□ -1.63
CHMP4CQ96CF2 HMGN2P28-201ENST00000606102 262 ntBASIC4.87□□□□□ -1.63
CHMP4CQ96CF2 AP000254.1-201ENST00000609934 520 ntBASIC4.87□□□□□ -1.63
CHMP4CQ96CF2 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CHMP4CQ96CF2 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CHMP4CQ96CF2 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CHMP4CQ96CF2 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
CHMP4CQ96CF2 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CHMP4CQ96CF2 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CHMP4CQ96CF2 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CHMP4CQ96CF2 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.86□□□□□ -1.63
CHMP4CQ96CF2 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CHMP4CQ96CF2 AC090337.1-201ENST00000579651 2074 ntBASIC4.86□□□□□ -1.63
CHMP4CQ96CF2 RNU6-359P-201ENST00000365466 108 ntBASIC4.86□□□□□ -1.63
CHMP4CQ96CF2 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
CHMP4CQ96CF2 OR5H15-201ENST00000383696 930 ntBASIC4.86□□□□□ -1.63
CHMP4CQ96CF2 MIR3074-201ENST00000384885 81 ntBASIC4.86□□□□□ -1.63
CHMP4CQ96CF2 SNORA57.1-201ENST00000391227 145 ntBASIC4.86□□□□□ -1.63
CHMP4CQ96CF2 SNORA3C-201ENST00000408792 125 ntBASIC4.86□□□□□ -1.63
CHMP4CQ96CF2 Y_RNA.598-201ENST00000410480 95 ntBASIC4.86□□□□□ -1.63
CHMP4CQ96CF2 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.86□□□□□ -1.63
CHMP4CQ96CF2 DLGAP5P1-201ENST00000430307 464 ntBASIC4.86□□□□□ -1.63
CHMP4CQ96CF2 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.86□□□□□ -1.63
CHMP4CQ96CF2 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC4.86□□□□□ -1.63
CHMP4CQ96CF2 AC108734.1-201ENST00000439549 399 ntBASIC4.86□□□□□ -1.63
CHMP4CQ96CF2 AC006011.1-201ENST00000442758 349 ntBASIC4.86□□□□□ -1.63
CHMP4CQ96CF2 RPS4XP4-201ENST00000443195 763 ntBASIC4.86□□□□□ -1.63
CHMP4CQ96CF2 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.86□□□□□ -1.63
CHMP4CQ96CF2 RPL5P32-201ENST00000454085 879 ntBASIC4.86□□□□□ -1.63
CHMP4CQ96CF2 AP1S2P1-201ENST00000457344 379 ntBASIC4.86□□□□□ -1.63
CHMP4CQ96CF2 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.86□□□□□ -1.63
CHMP4CQ96CF2 S100A11P1-201ENST00000477525 312 ntBASIC4.86□□□□□ -1.63
CHMP4CQ96CF2 AC021382.1-201ENST00000483523 359 ntBASIC4.86□□□□□ -1.63
CHMP4CQ96CF2 RPL29P14-201ENST00000495837 428 ntBASIC4.86□□□□□ -1.63
CHMP4CQ96CF2 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
CHMP4CQ96CF2 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
CHMP4CQ96CF2 PAICSP4-201ENST00000517543 1253 ntBASIC4.86□□□□□ -1.63
CHMP4CQ96CF2 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.86□□□□□ -1.63
CHMP4CQ96CF2 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.86□□□□□ -1.63
CHMP4CQ96CF2 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.86□□□□□ -1.63
CHMP4CQ96CF2 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.86□□□□□ -1.63
CHMP4CQ96CF2 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.86□□□□□ -1.63
CHMP4CQ96CF2 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.86□□□□□ -1.63
CHMP4CQ96CF2 AC012417.1-201ENST00000582307 1039 ntBASIC4.86□□□□□ -1.63
CHMP4CQ96CF2 AC005771.1-201ENST00000585581 349 ntBASIC4.86□□□□□ -1.63
CHMP4CQ96CF2 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.86□□□□□ -1.63
CHMP4CQ96CF2 BNIP3P8-201ENST00000597863 560 ntBASIC4.86□□□□□ -1.63
CHMP4CQ96CF2 SEPT7P9-203ENST00000604116 343 ntBASIC4.86□□□□□ -1.63
CHMP4CQ96CF2 AC112191.3-201ENST00000604371 277 ntBASIC4.86□□□□□ -1.63
CHMP4CQ96CF2 AL365503.1-201ENST00000605247 905 ntBASIC4.86□□□□□ -1.63
CHMP4CQ96CF2 AC128687.2-201ENST00000609657 566 ntBASIC4.86□□□□□ -1.63
CHMP4CQ96CF2 AC122108.2-201ENST00000611946 526 ntBASIC4.86□□□□□ -1.63
CHMP4CQ96CF2 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.86□□□□□ -1.63
CHMP4CQ96CF2 AL590099.1-201ENST00000615276 138 ntBASIC4.86□□□□□ -1.63
CHMP4CQ96CF2 MIR492-201ENST00000638676 116 ntBASIC4.86□□□□□ -1.63
CHMP4CQ96CF2 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CHMP4CQ96CF2 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.86□□□□□ -1.63
CHMP4CQ96CF2 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CHMP4CQ96CF2 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.86□□□□□ -1.63
CHMP4CQ96CF2 AC092125.1-201ENST00000562568 1995 ntBASIC4.85□□□□□ -1.63
CHMP4CQ96CF2 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CHMP4CQ96CF2 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CHMP4CQ96CF2 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.85□□□□□ -1.63
CHMP4CQ96CF2 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CHMP4CQ96CF2 RNU6-1249P-201ENST00000363237 111 ntBASIC4.85□□□□□ -1.63
CHMP4CQ96CF2 RN7SKP44-201ENST00000363602 316 ntBASIC4.85□□□□□ -1.63
CHMP4CQ96CF2 MIR1251-201ENST00000408552 70 ntBASIC4.85□□□□□ -1.63
CHMP4CQ96CF2 AL663109.1-201ENST00000411498 844 ntBASIC4.85□□□□□ -1.63
CHMP4CQ96CF2 AL359704.1-201ENST00000411586 781 ntBASIC4.85□□□□□ -1.63
CHMP4CQ96CF2 HMGN1P14-201ENST00000412459 517 ntBASIC4.85□□□□□ -1.63
CHMP4CQ96CF2 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.85□□□□□ -1.63
CHMP4CQ96CF2 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CHMP4CQ96CF2 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CHMP4CQ96CF2 ATP5HP2-201ENST00000433885 485 ntBASIC4.85□□□□□ -1.63
CHMP4CQ96CF2 UBE2V1P13-201ENST00000436983 439 ntBASIC4.85□□□□□ -1.63
CHMP4CQ96CF2 HMGB1P25-201ENST00000468402 607 ntBASIC4.85□□□□□ -1.63
CHMP4CQ96CF2 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CHMP4CQ96CF2 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms