Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 RNU6-223P-201ENST00000362830 107 ntBASIC5.26□□□□□ -1.57
BRF1Q92994 Y_RNA.234-201ENST00000364409 97 ntBASIC5.26□□□□□ -1.57
BRF1Q92994 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
BRF1Q92994 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
BRF1Q92994 GLULP6-201ENST00000399502 913 ntBASIC5.26□□□□□ -1.57
BRF1Q92994 AL356432.1-201ENST00000405809 419 ntBASIC5.26□□□□□ -1.57
BRF1Q92994 RNU2-21P-201ENST00000410368 188 ntBASIC5.26□□□□□ -1.57
BRF1Q92994 AC009237.10-201ENST00000414112 510 ntBASIC5.26□□□□□ -1.57
BRF1Q92994 AC007283.2-201ENST00000424739 197 ntBASIC5.26□□□□□ -1.57
BRF1Q92994 MTCO3P46-201ENST00000425787 232 ntBASIC5.26□□□□□ -1.57
BRF1Q92994 BNIP3P2-201ENST00000441221 577 ntBASIC5.26□□□□□ -1.57
BRF1Q92994 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC5.26□□□□□ -1.57
BRF1Q92994 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC5.26□□□□□ -1.57
BRF1Q92994 AC239809.1-201ENST00000450470 217 ntBASIC5.26□□□□□ -1.57
BRF1Q92994 AL513533.1-201ENST00000453728 415 ntBASIC5.26□□□□□ -1.57
BRF1Q92994 RNA5SP337-201ENST00000517007 109 ntBASIC5.26□□□□□ -1.57
BRF1Q92994 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC5.26□□□□□ -1.57
BRF1Q92994 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.26□□□□□ -1.57
BRF1Q92994 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
BRF1Q92994 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC5.26□□□□□ -1.57
BRF1Q92994 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.26□□□□□ -1.57
BRF1Q92994 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC5.26□□□□□ -1.57
BRF1Q92994 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC5.26□□□□□ -1.57
BRF1Q92994 AC110743.1-201ENST00000584870 478 ntBASIC5.26□□□□□ -1.57
BRF1Q92994 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.26□□□□□ -1.57
BRF1Q92994 AC005498.1-201ENST00000592125 465 ntBASIC5.26□□□□□ -1.57
BRF1Q92994 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.26□□□□□ -1.57
BRF1Q92994 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.26□□□□□ -1.57
BRF1Q92994 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.26□□□□□ -1.57
BRF1Q92994 AC079597.1-201ENST00000624306 508 ntBASIC5.26□□□□□ -1.57
BRF1Q92994 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
BRF1Q92994 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
BRF1Q92994 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.26□□□□□ -1.57
BRF1Q92994 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC5.26□□□□□ -1.57
BRF1Q92994 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
BRF1Q92994 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
BRF1Q92994 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.25□□□□□ -1.57
BRF1Q92994 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
BRF1Q92994 AC007529.1-201ENST00000418574 2178 ntBASIC5.25□□□□□ -1.57
BRF1Q92994 AC083843.3-201ENST00000623679 2186 ntBASIC5.25□□□□□ -1.57
BRF1Q92994 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
BRF1Q92994 DHX40P1-201ENST00000588725 1412 ntBASIC5.25□□□□□ -1.57
BRF1Q92994 RPL7P26-201ENST00000333817 754 ntBASIC5.25□□□□□ -1.57
BRF1Q92994 RNY4P16-201ENST00000364768 94 ntBASIC5.25□□□□□ -1.57
BRF1Q92994 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.25□□□□□ -1.57
BRF1Q92994 RNU1-44P-201ENST00000384453 163 ntBASIC5.25□□□□□ -1.57
BRF1Q92994 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
BRF1Q92994 HDGFP1-201ENST00000405943 252 ntBASIC5.25□□□□□ -1.57
BRF1Q92994 RN7SKP235-201ENST00000410662 305 ntBASIC5.25□□□□□ -1.57
BRF1Q92994 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC5.25□□□□□ -1.57
BRF1Q92994 AC009302.1-201ENST00000417147 390 ntBASIC5.25□□□□□ -1.57
BRF1Q92994 AC069213.2-201ENST00000420238 366 ntBASIC5.25□□□□□ -1.57
BRF1Q92994 RBM6-203ENST00000421682 684 ntTSL 2 BASIC5.25□□□□□ -1.57
BRF1Q92994 AL592293.2-201ENST00000422292 996 ntBASIC5.25□□□□□ -1.57
BRF1Q92994 RPL7AP25-201ENST00000423357 805 ntBASIC5.25□□□□□ -1.57
BRF1Q92994 CEACAMP1-201ENST00000434624 1035 ntBASIC5.25□□□□□ -1.57
BRF1Q92994 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.25□□□□□ -1.57
BRF1Q92994 AL772161.1-201ENST00000439130 476 ntBASIC5.25□□□□□ -1.57
BRF1Q92994 AC114495.1-201ENST00000441274 436 ntBASIC5.25□□□□□ -1.57
BRF1Q92994 AC011753.3-201ENST00000443436 406 ntBASIC5.25□□□□□ -1.57
BRF1Q92994 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
BRF1Q92994 AC140076.1-201ENST00000449897 361 ntBASIC5.25□□□□□ -1.57
BRF1Q92994 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC5.25□□□□□ -1.57
BRF1Q92994 AL356010.1-201ENST00000456364 102 ntBASIC5.25□□□□□ -1.57
BRF1Q92994 snoU13.8-201ENST00000458890 104 ntBASIC5.25□□□□□ -1.57
BRF1Q92994 RPL23AP65-201ENST00000475608 468 ntBASIC5.25□□□□□ -1.57
BRF1Q92994 NIPA2P2-201ENST00000496376 1083 ntBASIC5.25□□□□□ -1.57
BRF1Q92994 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC5.25□□□□□ -1.57
BRF1Q92994 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.25□□□□□ -1.57
BRF1Q92994 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC5.25□□□□□ -1.57
BRF1Q92994 AC090151.1-201ENST00000520784 730 ntBASIC5.25□□□□□ -1.57
BRF1Q92994 OR4R1P-201ENST00000529879 463 ntBASIC5.25□□□□□ -1.57
BRF1Q92994 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC5.25□□□□□ -1.57
BRF1Q92994 AC243972.3-201ENST00000539655 198 ntBASIC5.25□□□□□ -1.57
BRF1Q92994 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC5.25□□□□□ -1.57
BRF1Q92994 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC5.25□□□□□ -1.57
BRF1Q92994 AC069061.3-201ENST00000582254 823 ntBASIC5.25□□□□□ -1.57
BRF1Q92994 UBE2L4-201ENST00000587688 464 ntBASIC5.25□□□□□ -1.57
BRF1Q92994 AC010928.3-201ENST00000587712 541 ntBASIC5.25□□□□□ -1.57
BRF1Q92994 Z84480.1-201ENST00000605131 311 ntBASIC5.25□□□□□ -1.57
BRF1Q92994 AL050343.2-201ENST00000607338 280 ntBASIC5.25□□□□□ -1.57
BRF1Q92994 MIR6891-201ENST00000618788 93 ntBASIC5.25□□□□□ -1.57
BRF1Q92994 AC233309.1-201ENST00000619522 751 ntBASIC5.25□□□□□ -1.57
BRF1Q92994 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.25□□□□□ -1.57
BRF1Q92994 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.25□□□□□ -1.57
BRF1Q92994 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.25□□□□□ -1.57
BRF1Q92994 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.25□□□□□ -1.57
BRF1Q92994 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
BRF1Q92994 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
BRF1Q92994 AC009902.3-201ENST00000606235 2172 ntBASIC5.24□□□□□ -1.57
BRF1Q92994 RNU6-74P-201ENST00000384235 107 ntBASIC5.24□□□□□ -1.57
BRF1Q92994 RNU6-606P-201ENST00000384721 111 ntBASIC5.24□□□□□ -1.57
BRF1Q92994 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
BRF1Q92994 U3.20-201ENST00000390909 217 ntBASIC5.24□□□□□ -1.57
BRF1Q92994 MIR1302-11-201ENST00000408051 138 ntBASIC5.24□□□□□ -1.57
BRF1Q92994 MIR1302-9-201ENST00000408365 138 ntBASIC5.24□□□□□ -1.57
BRF1Q92994 MIR1302-10-201ENST00000408734 138 ntBASIC5.24□□□□□ -1.57
BRF1Q92994 RN7SKP32-201ENST00000410167 303 ntBASIC5.24□□□□□ -1.57
BRF1Q92994 RNU2-9P-201ENST00000410194 145 ntBASIC5.24□□□□□ -1.57
BRF1Q92994 AC092832.1-201ENST00000422934 400 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms