Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.53□□□□□ -1.36
PTCD2Q8WV60 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
PTCD2Q8WV60 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
PTCD2Q8WV60 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PTCD2Q8WV60 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.53□□□□□ -1.36
PTCD2Q8WV60 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.53□□□□□ -1.36
PTCD2Q8WV60 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
PTCD2Q8WV60 PABPC1P6-201ENST00000445594 1829 ntBASIC6.53□□□□□ -1.36
PTCD2Q8WV60 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
PTCD2Q8WV60 AL391516.1-201ENST00000554380 2449 ntBASIC6.52□□□□□ -1.36
PTCD2Q8WV60 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.52□□□□□ -1.37
PTCD2Q8WV60 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PTCD2Q8WV60 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
PTCD2Q8WV60 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.52□□□□□ -1.37
PTCD2Q8WV60 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
PTCD2Q8WV60 AC123769.1-201ENST00000530992 3192 ntBASIC6.52□□□□□ -1.37
PTCD2Q8WV60 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PTCD2Q8WV60 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
PTCD2Q8WV60 RN7SKP227-201ENST00000364445 330 ntBASIC6.52□□□□□ -1.37
PTCD2Q8WV60 SNORD116-14-201ENST00000383894 92 ntBASIC6.52□□□□□ -1.37
PTCD2Q8WV60 SNORA70H-201ENST00000383910 135 ntBASIC6.52□□□□□ -1.37
PTCD2Q8WV60 SNORD116-17-201ENST00000383929 92 ntBASIC6.52□□□□□ -1.37
PTCD2Q8WV60 SNORA70J-201ENST00000384182 135 ntBASIC6.52□□□□□ -1.37
PTCD2Q8WV60 RNU6-80P-201ENST00000384195 107 ntBASIC6.52□□□□□ -1.37
PTCD2Q8WV60 RNU6-339P-201ENST00000384310 107 ntBASIC6.52□□□□□ -1.37
PTCD2Q8WV60 SNORD116-15-201ENST00000384445 92 ntBASIC6.52□□□□□ -1.37
PTCD2Q8WV60 SNORD116-20-201ENST00000384529 92 ntBASIC6.52□□□□□ -1.37
PTCD2Q8WV60 SNORD116-19-201ENST00000384729 92 ntBASIC6.52□□□□□ -1.37
PTCD2Q8WV60 Y_RNA.571-201ENST00000384753 98 ntBASIC6.52□□□□□ -1.37
PTCD2Q8WV60 SNORA11.5-201ENST00000408163 128 ntBASIC6.52□□□□□ -1.37
PTCD2Q8WV60 ATP5A1P8-201ENST00000423669 1291 ntBASIC6.52□□□□□ -1.37
PTCD2Q8WV60 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.52□□□□□ -1.37
PTCD2Q8WV60 RPS20P1-201ENST00000434853 354 ntBASIC6.52□□□□□ -1.37
PTCD2Q8WV60 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC6.52□□□□□ -1.37
PTCD2Q8WV60 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC6.52□□□□□ -1.37
PTCD2Q8WV60 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC6.52□□□□□ -1.37
PTCD2Q8WV60 UQCRBP2-201ENST00000447827 297 ntBASIC6.52□□□□□ -1.37
PTCD2Q8WV60 RPL7L1P1-201ENST00000448259 785 ntBASIC6.52□□□□□ -1.37
PTCD2Q8WV60 AL137159.1-201ENST00000452808 512 ntBASIC6.52□□□□□ -1.37
PTCD2Q8WV60 RN7SL413P-201ENST00000482700 297 ntBASIC6.52□□□□□ -1.37
PTCD2Q8WV60 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.52□□□□□ -1.37
PTCD2Q8WV60 CREM-238ENST00000488741 651 ntTSL 2 BASIC6.52□□□□□ -1.37
PTCD2Q8WV60 AL160314.1-201ENST00000490836 438 ntBASIC6.52□□□□□ -1.37
PTCD2Q8WV60 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.52□□□□□ -1.37
PTCD2Q8WV60 AK3P2-201ENST00000507976 429 ntBASIC6.52□□□□□ -1.37
PTCD2Q8WV60 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC6.52□□□□□ -1.37
PTCD2Q8WV60 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.52□□□□□ -1.37
PTCD2Q8WV60 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC6.52□□□□□ -1.37
PTCD2Q8WV60 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC6.52□□□□□ -1.37
PTCD2Q8WV60 AK6P2-201ENST00000549020 471 ntBASIC6.52□□□□□ -1.37
PTCD2Q8WV60 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.52□□□□□ -1.37
PTCD2Q8WV60 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC6.52□□□□□ -1.37
PTCD2Q8WV60 uc_338.29-201ENST00000615099 168 ntBASIC6.52□□□□□ -1.37
PTCD2Q8WV60 AL450472.3-201ENST00000615578 367 ntBASIC6.52□□□□□ -1.37
PTCD2Q8WV60 MIR4275-201ENST00000636486 87 ntBASIC6.52□□□□□ -1.37
PTCD2Q8WV60 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PTCD2Q8WV60 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
PTCD2Q8WV60 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PTCD2Q8WV60 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
PTCD2Q8WV60 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PTCD2Q8WV60 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PTCD2Q8WV60 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PTCD2Q8WV60 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PTCD2Q8WV60 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PTCD2Q8WV60 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PTCD2Q8WV60 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.52□□□□□ -1.37
PTCD2Q8WV60 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
PTCD2Q8WV60 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
PTCD2Q8WV60 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.51□□□□□ -1.37
PTCD2Q8WV60 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PTCD2Q8WV60 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PTCD2Q8WV60 PRO1804-201ENST00000623780 2050 ntBASIC6.51□□□□□ -1.37
PTCD2Q8WV60 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
PTCD2Q8WV60 AC138907.8-201ENST00000623981 2256 ntBASIC6.51□□□□□ -1.37
PTCD2Q8WV60 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PTCD2Q8WV60 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
PTCD2Q8WV60 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PTCD2Q8WV60 AC110774.1-201ENST00000623567 2018 ntBASIC6.51□□□□□ -1.37
PTCD2Q8WV60 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
PTCD2Q8WV60 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
PTCD2Q8WV60 MT-TC-201ENST00000387405 66 ntBASIC6.51□□□□□ -1.37
PTCD2Q8WV60 DUTP5-201ENST00000406790 469 ntBASIC6.51□□□□□ -1.37
PTCD2Q8WV60 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.51□□□□□ -1.37
PTCD2Q8WV60 AC092447.6-201ENST00000414578 210 ntBASIC6.51□□□□□ -1.37
PTCD2Q8WV60 AL391219.1-201ENST00000422570 483 ntBASIC6.51□□□□□ -1.37
PTCD2Q8WV60 TRAPPC2P5-201ENST00000426293 308 ntBASIC6.51□□□□□ -1.37
PTCD2Q8WV60 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.51□□□□□ -1.37
PTCD2Q8WV60 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.51□□□□□ -1.37
PTCD2Q8WV60 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
PTCD2Q8WV60 AC106800.3-201ENST00000511389 308 ntBASIC6.51□□□□□ -1.37
PTCD2Q8WV60 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.51□□□□□ -1.37
PTCD2Q8WV60 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.51□□□□□ -1.37
PTCD2Q8WV60 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC6.51□□□□□ -1.37
PTCD2Q8WV60 AC008749.1-201ENST00000597650 306 ntBASIC6.51□□□□□ -1.37
PTCD2Q8WV60 AC005828.6-201ENST00000606610 232 ntBASIC6.51□□□□□ -1.37
PTCD2Q8WV60 AL008718.3-201ENST00000610217 321 ntBASIC6.51□□□□□ -1.37
PTCD2Q8WV60 AC099506.2-201ENST00000623074 221 ntBASIC6.51□□□□□ -1.37
PTCD2Q8WV60 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.51□□□□□ -1.37
PTCD2Q8WV60 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PTCD2Q8WV60 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms