Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 RAB9AP5-201ENST00000437794 597 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 RAB9AP2-201ENST00000443911 597 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 AC092451.1-201ENST00000480211 153 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 MEPE-206ENST00000511670 550 ntTSL 4 BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 OR4U1P-201ENST00000554958 912 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 AC123768.4-201ENST00000616244 701 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
SYNE1Q8NF91 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
SYNE1Q8NF91 AC027514.1-201ENST00000588561 1603 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 RPLP0P7-201ENST00000416050 667 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC0.73□□□□□ -2.29
SYNE1Q8NF91 AL592437.1-201ENST00000443781 492 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC0.73□□□□□ -2.29
SYNE1Q8NF91 AL024509.2-201ENST00000493462 493 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC0.73□□□□□ -2.29
SYNE1Q8NF91 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC0.73□□□□□ -2.29
SYNE1Q8NF91 AP002770.2-201ENST00000543613 532 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC0.73□□□□□ -2.29
SYNE1Q8NF91 AC007687.1-201ENST00000602704 304 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 AC011472.4-201ENST00000615848 491 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
SYNE1Q8NF91 AL512646.1-201ENST00000269395 1077 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 VN1R31P-201ENST00000417498 730 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC0.73□□□□□ -2.29
SYNE1Q8NF91 RPL36AP6-201ENST00000435770 321 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 NDUFA5P4-201ENST00000436704 385 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 AC008716.1-201ENST00000511084 513 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC0.73□□□□□ -2.29
SYNE1Q8NF91 SETP2-201ENST00000553886 926 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 BX664608.1-201ENST00000610519 487 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 AL589935.2-201ENST00000616471 1231 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 VPS8-228ENST00000628962 207 ntTSL 5 BASIC0.73□□□□□ -2.29
SYNE1Q8NF91 ATP8A2P3-201ENST00000426792 1536 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 SNORA17.3-201ENST00000391159 129 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 AL034374.1-201ENST00000406329 351 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC0.73□□□□□ -2.29
SYNE1Q8NF91 AL513175.2-201ENST00000422071 443 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC0.73□□□□□ -2.29
SYNE1Q8NF91 RPL21P99-201ENST00000480369 423 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC0.73□□□□□ -2.29
SYNE1Q8NF91 FAM92A1P2-202ENST00000504766 877 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC0.73□□□□□ -2.29
SYNE1Q8NF91 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC0.73□□□□□ -2.29
SYNE1Q8NF91 AC104237.2-201ENST00000612456 443 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 AL137003.2-201ENST00000606924 2538 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.73□□□□□ -2.29
SYNE1Q8NF91 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
SYNE1Q8NF91 RN7SKP192-201ENST00000411291 327 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 AC092832.1-201ENST00000422934 400 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 MUPP-201ENST00000438111 566 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC0.73□□□□□ -2.29
SYNE1Q8NF91 RPL9P33-201ENST00000484311 566 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC0.73□□□□□ -2.29
SYNE1Q8NF91 RN7SKP282-201ENST00000516824 299 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 AC093331.1-201ENST00000521474 169 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC0.73□□□□□ -2.29
SYNE1Q8NF91 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC0.73□□□□□ -2.29
SYNE1Q8NF91 AP000857.1-201ENST00000532151 543 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 AC008083.2-201ENST00000546707 476 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC0.73□□□□□ -2.29
SYNE1Q8NF91 AL133393.1-201ENST00000603277 287 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 AC005046.1-201ENST00000608515 625 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 NF1P10-201ENST00000613227 742 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 AC093536.2-201ENST00000565257 1406 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 AC109315.1-201ENST00000584143 1347 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 AL356292.1-201ENST00000283110 373 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 U8.9-201ENST00000365667 134 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 AC093084.1-201ENST00000424233 687 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 AL138785.1-201ENST00000425821 331 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC0.73□□□□□ -2.29
SYNE1Q8NF91 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
SYNE1Q8NF91 OR5H4P-201ENST00000510851 923 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 RGS4-209ENST00000531057 544 ntTSL 4 BASIC0.73□□□□□ -2.29
SYNE1Q8NF91 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC0.73□□□□□ -2.29
SYNE1Q8NF91 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC0.73□□□□□ -2.29
SYNE1Q8NF91 OR4T1P-201ENST00000554933 911 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 PSMA3P-201ENST00000555485 635 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 AC026464.5-201ENST00000562497 722 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC0.73□□□□□ -2.29
SYNE1Q8NF91 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC0.73□□□□□ -2.29
SYNE1Q8NF91 AC096656.1-201ENST00000623826 1364 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 RNU6-1251P-201ENST00000364502 107 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
SYNE1Q8NF91 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC0.73□□□□□ -2.29
SYNE1Q8NF91 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC0.73□□□□□ -2.29
SYNE1Q8NF91 AC079804.2-201ENST00000490376 200 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 RNU6-943P-201ENST00000516960 98 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 MTND2P13-201ENST00000577438 1039 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 AC020895.1-201ENST00000595362 272 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 MTCO2P22-201ENST00000603246 681 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC0.73□□□□□ -2.29
SYNE1Q8NF91 AC091046.2-201ENST00000620775 665 ntBASIC0.73□□□□□ -2.29
SYNE1Q8NF91 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
SYNE1Q8NF91 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
SYNE1Q8NF91 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
SYNE1Q8NF91 SNORA3.2-201ENST00000408221 125 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms