Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SMC1BQ8NDV3 AC004944.1-201ENST00000517807 3059 ntBASIC5.07□□□□□ -1.6
SMC1BQ8NDV3 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SMC1BQ8NDV3 NUP58P1-201ENST00000502546 1738 ntBASIC5.07□□□□□ -1.6
SMC1BQ8NDV3 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SMC1BQ8NDV3 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SMC1BQ8NDV3 Z82217.1-201ENST00000625157 8149 ntBASIC5.07□□□□□ -1.6
SMC1BQ8NDV3 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SMC1BQ8NDV3 OR4G2P-201ENST00000328113 903 ntBASIC5.07□□□□□ -1.6
SMC1BQ8NDV3 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SMC1BQ8NDV3 RNY4P34-201ENST00000364779 95 ntBASIC5.07□□□□□ -1.6
SMC1BQ8NDV3 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SMC1BQ8NDV3 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.07□□□□□ -1.6
SMC1BQ8NDV3 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC5.07□□□□□ -1.6
SMC1BQ8NDV3 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC5.07□□□□□ -1.6
SMC1BQ8NDV3 MRPS10P2-201ENST00000431226 381 ntBASIC5.07□□□□□ -1.6
SMC1BQ8NDV3 MTND6P18-201ENST00000439477 513 ntBASIC5.07□□□□□ -1.6
SMC1BQ8NDV3 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC5.07□□□□□ -1.6
SMC1BQ8NDV3 HMGB3P9-201ENST00000441799 583 ntBASIC5.07□□□□□ -1.6
SMC1BQ8NDV3 HMGB3P21-201ENST00000452483 547 ntBASIC5.07□□□□□ -1.6
SMC1BQ8NDV3 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC5.07□□□□□ -1.6
SMC1BQ8NDV3 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SMC1BQ8NDV3 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC5.07□□□□□ -1.6
SMC1BQ8NDV3 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC5.07□□□□□ -1.6
SMC1BQ8NDV3 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC5.07□□□□□ -1.6
SMC1BQ8NDV3 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC5.07□□□□□ -1.6
SMC1BQ8NDV3 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC5.07□□□□□ -1.6
SMC1BQ8NDV3 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC5.07□□□□□ -1.6
SMC1BQ8NDV3 AC093677.1-201ENST00000514414 678 ntBASIC5.07□□□□□ -1.6
SMC1BQ8NDV3 RNU6-314P-201ENST00000516574 104 ntBASIC5.07□□□□□ -1.6
SMC1BQ8NDV3 RN7SKP277-201ENST00000516895 283 ntBASIC5.07□□□□□ -1.6
SMC1BQ8NDV3 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
SMC1BQ8NDV3 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC5.07□□□□□ -1.6
SMC1BQ8NDV3 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC5.07□□□□□ -1.6
SMC1BQ8NDV3 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC5.07□□□□□ -1.6
SMC1BQ8NDV3 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC5.07□□□□□ -1.6
SMC1BQ8NDV3 AP000860.1-201ENST00000605250 559 ntBASIC5.07□□□□□ -1.6
SMC1BQ8NDV3 U3.45-201ENST00000607547 219 ntBASIC5.07□□□□□ -1.6
SMC1BQ8NDV3 AC131238.1-201ENST00000617135 328 ntBASIC5.07□□□□□ -1.6
SMC1BQ8NDV3 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC5.07□□□□□ -1.6
SMC1BQ8NDV3 PISRT1-201ENST00000626175 531 ntBASIC5.07□□□□□ -1.6
SMC1BQ8NDV3 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SMC1BQ8NDV3 AL445487.1-201ENST00000415694 1580 ntBASIC5.07□□□□□ -1.6
SMC1BQ8NDV3 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SMC1BQ8NDV3 AC095050.2-201ENST00000510748 1458 ntBASIC5.07□□□□□ -1.6
SMC1BQ8NDV3 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.06□□□□□ -1.6
SMC1BQ8NDV3 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SMC1BQ8NDV3 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SMC1BQ8NDV3 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SMC1BQ8NDV3 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.06□□□□□ -1.6
SMC1BQ8NDV3 Y_RNA.296-201ENST00000364930 108 ntBASIC5.06□□□□□ -1.6
SMC1BQ8NDV3 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SMC1BQ8NDV3 RPS3AP36-201ENST00000398190 775 ntBASIC5.06□□□□□ -1.6
SMC1BQ8NDV3 RPS20P2-201ENST00000402520 389 ntBASIC5.06□□□□□ -1.6
SMC1BQ8NDV3 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC5.06□□□□□ -1.6
SMC1BQ8NDV3 RPS29P4-201ENST00000414733 161 ntBASIC5.06□□□□□ -1.6
SMC1BQ8NDV3 MTND1P23-201ENST00000416931 372 ntBASIC5.06□□□□□ -1.6
SMC1BQ8NDV3 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.06□□□□□ -1.6
SMC1BQ8NDV3 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC5.06□□□□□ -1.6
SMC1BQ8NDV3 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC5.06□□□□□ -1.6
SMC1BQ8NDV3 AL691449.1-201ENST00000426570 421 ntBASIC5.06□□□□□ -1.6
SMC1BQ8NDV3 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC5.06□□□□□ -1.6
SMC1BQ8NDV3 RPEP2-201ENST00000432149 701 ntBASIC5.06□□□□□ -1.6
SMC1BQ8NDV3 ARPC3P1-201ENST00000437218 533 ntBASIC5.06□□□□□ -1.6
SMC1BQ8NDV3 AC004938.1-201ENST00000438468 308 ntBASIC5.06□□□□□ -1.6
SMC1BQ8NDV3 RPL7P52-201ENST00000449200 742 ntBASIC5.06□□□□□ -1.6
SMC1BQ8NDV3 GAPDHP17-201ENST00000449858 1001 ntBASIC5.06□□□□□ -1.6
SMC1BQ8NDV3 PPIAP3-201ENST00000450588 505 ntBASIC5.06□□□□□ -1.6
SMC1BQ8NDV3 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.06□□□□□ -1.6
SMC1BQ8NDV3 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC5.06□□□□□ -1.6
SMC1BQ8NDV3 RNA5SP246-201ENST00000458909 119 ntBASIC5.06□□□□□ -1.6
SMC1BQ8NDV3 AC087385.1-201ENST00000475062 312 ntBASIC5.06□□□□□ -1.6
SMC1BQ8NDV3 AL049873.1-201ENST00000480540 376 ntBASIC5.06□□□□□ -1.6
SMC1BQ8NDV3 AC091133.4-201ENST00000511142 308 ntBASIC5.06□□□□□ -1.6
SMC1BQ8NDV3 AC093853.1-201ENST00000515689 483 ntBASIC5.06□□□□□ -1.6
SMC1BQ8NDV3 MTCYBP41-201ENST00000528913 1123 ntBASIC5.06□□□□□ -1.6
SMC1BQ8NDV3 AC005868.1-201ENST00000536421 331 ntBASIC5.06□□□□□ -1.6
SMC1BQ8NDV3 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC5.06□□□□□ -1.6
SMC1BQ8NDV3 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC5.06□□□□□ -1.6
SMC1BQ8NDV3 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.06□□□□□ -1.6
SMC1BQ8NDV3 TPRKBP2-201ENST00000565969 475 ntBASIC5.06□□□□□ -1.6
SMC1BQ8NDV3 AC034268.2-201ENST00000571784 482 ntBASIC5.06□□□□□ -1.6
SMC1BQ8NDV3 YWHAQP7-201ENST00000603536 658 ntBASIC5.06□□□□□ -1.6
SMC1BQ8NDV3 AC011468.4-201ENST00000603942 409 ntBASIC5.06□□□□□ -1.6
SMC1BQ8NDV3 AL592436.1-201ENST00000605135 558 ntBASIC5.06□□□□□ -1.6
SMC1BQ8NDV3 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC5.06□□□□□ -1.6
SMC1BQ8NDV3 AC091304.9-201ENST00000612091 226 ntBASIC5.06□□□□□ -1.6
SMC1BQ8NDV3 MIR7975-201ENST00000619350 68 ntBASIC5.06□□□□□ -1.6
SMC1BQ8NDV3 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC5.06□□□□□ -1.6
SMC1BQ8NDV3 MIR4496-201ENST00000635896 61 ntBASIC5.06□□□□□ -1.6
SMC1BQ8NDV3 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.06□□□□□ -1.6
SMC1BQ8NDV3 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SMC1BQ8NDV3 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
SMC1BQ8NDV3 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC5.06□□□□□ -1.6
SMC1BQ8NDV3 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SMC1BQ8NDV3 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SMC1BQ8NDV3 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
SMC1BQ8NDV3 MAPK10-372ENST00000641954 3413 ntBASIC5.06□□□□□ -1.6
SMC1BQ8NDV3 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
SMC1BQ8NDV3 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms