Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 RPS17P8-201ENST00000434525 335 ntBASIC4.84□□□□□ -1.63
SYNPOQ8N3V7 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.84□□□□□ -1.63
SYNPOQ8N3V7 AC122718.1-201ENST00000439448 744 ntBASIC4.84□□□□□ -1.63
SYNPOQ8N3V7 RPS15AP9-201ENST00000439856 381 ntBASIC4.84□□□□□ -1.63
SYNPOQ8N3V7 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.84□□□□□ -1.63
SYNPOQ8N3V7 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.84□□□□□ -1.63
SYNPOQ8N3V7 NUTF2P7-201ENST00000453086 375 ntBASIC4.84□□□□□ -1.63
SYNPOQ8N3V7 FAM133DP-201ENST00000464802 691 ntBASIC4.84□□□□□ -1.63
SYNPOQ8N3V7 AC010618.1-201ENST00000469924 477 ntBASIC4.84□□□□□ -1.63
SYNPOQ8N3V7 VN1R105P-201ENST00000486595 910 ntBASIC4.84□□□□□ -1.63
SYNPOQ8N3V7 RN7SL558P-201ENST00000497468 299 ntBASIC4.84□□□□□ -1.63
SYNPOQ8N3V7 VN1R104P-201ENST00000505115 1009 ntBASIC4.84□□□□□ -1.63
SYNPOQ8N3V7 PRDX4P1-201ENST00000507189 574 ntBASIC4.84□□□□□ -1.63
SYNPOQ8N3V7 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.84□□□□□ -1.63
SYNPOQ8N3V7 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.84□□□□□ -1.63
SYNPOQ8N3V7 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.84□□□□□ -1.63
SYNPOQ8N3V7 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC4.84□□□□□ -1.63
SYNPOQ8N3V7 AL359212.1-201ENST00000556608 614 ntBASIC4.84□□□□□ -1.63
SYNPOQ8N3V7 AC055876.1-202ENST00000567053 138 ntBASIC4.84□□□□□ -1.63
SYNPOQ8N3V7 AC105224.1-201ENST00000587055 421 ntBASIC4.84□□□□□ -1.63
SYNPOQ8N3V7 AC007621.1-201ENST00000604544 437 ntBASIC4.84□□□□□ -1.63
SYNPOQ8N3V7 AC104458.1-201ENST00000608243 463 ntBASIC4.84□□□□□ -1.63
SYNPOQ8N3V7 AC093788.1-201ENST00000609356 927 ntBASIC4.84□□□□□ -1.63
SYNPOQ8N3V7 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.84□□□□□ -1.63
SYNPOQ8N3V7 AC015967.1-201ENST00000619893 476 ntBASIC4.84□□□□□ -1.63
SYNPOQ8N3V7 AP005019.3-201ENST00000620418 560 ntBASIC4.84□□□□□ -1.63
SYNPOQ8N3V7 FRG1KP-201ENST00000623592 341 ntBASIC4.84□□□□□ -1.63
SYNPOQ8N3V7 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SYNPOQ8N3V7 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SYNPOQ8N3V7 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SYNPOQ8N3V7 TLK1P1-201ENST00000456760 2440 ntBASIC4.84□□□□□ -1.64
SYNPOQ8N3V7 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SYNPOQ8N3V7 AL645937.1-201ENST00000641739 1652 ntBASIC4.83□□□□□ -1.64
SYNPOQ8N3V7 ZNF680P1-201ENST00000436625 1469 ntBASIC4.83□□□□□ -1.64
SYNPOQ8N3V7 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SYNPOQ8N3V7 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
SYNPOQ8N3V7 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SYNPOQ8N3V7 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.83□□□□□ -1.64
SYNPOQ8N3V7 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SYNPOQ8N3V7 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.83□□□□□ -1.64
SYNPOQ8N3V7 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SYNPOQ8N3V7 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SYNPOQ8N3V7 RNU6-1322P-201ENST00000364309 107 ntBASIC4.83□□□□□ -1.64
SYNPOQ8N3V7 RNA5SP509-201ENST00000364577 119 ntBASIC4.83□□□□□ -1.64
SYNPOQ8N3V7 SNORA23-201ENST00000365128 182 ntBASIC4.83□□□□□ -1.64
SYNPOQ8N3V7 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
SYNPOQ8N3V7 MIR1193-201ENST00000408109 78 ntBASIC4.83□□□□□ -1.64
SYNPOQ8N3V7 AL591848.1-201ENST00000413092 322 ntBASIC4.83□□□□□ -1.64
SYNPOQ8N3V7 HMGB3P20-201ENST00000417997 600 ntBASIC4.83□□□□□ -1.64
SYNPOQ8N3V7 AC140479.3-201ENST00000418944 1126 ntBASIC4.83□□□□□ -1.64
SYNPOQ8N3V7 RPEP3-201ENST00000425462 676 ntBASIC4.83□□□□□ -1.64
SYNPOQ8N3V7 AL451139.1-201ENST00000434718 346 ntBASIC4.83□□□□□ -1.64
SYNPOQ8N3V7 RPS20P5-201ENST00000434808 360 ntBASIC4.83□□□□□ -1.64
SYNPOQ8N3V7 AC114755.5-201ENST00000447760 831 ntBASIC4.83□□□□□ -1.64
SYNPOQ8N3V7 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.83□□□□□ -1.64
SYNPOQ8N3V7 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.83□□□□□ -1.64
SYNPOQ8N3V7 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.83□□□□□ -1.64
SYNPOQ8N3V7 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.83□□□□□ -1.64
SYNPOQ8N3V7 AC073073.1-201ENST00000493920 463 ntBASIC4.83□□□□□ -1.64
SYNPOQ8N3V7 AC116353.2-201ENST00000505332 712 ntBASIC4.83□□□□□ -1.64
SYNPOQ8N3V7 AC091868.1-201ENST00000508746 304 ntBASIC4.83□□□□□ -1.64
SYNPOQ8N3V7 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.83□□□□□ -1.64
SYNPOQ8N3V7 AL512310.1-201ENST00000548639 172 ntBASIC4.83□□□□□ -1.64
SYNPOQ8N3V7 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SYNPOQ8N3V7 AL157687.1-201ENST00000554853 619 ntBASIC4.83□□□□□ -1.64
SYNPOQ8N3V7 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.83□□□□□ -1.64
SYNPOQ8N3V7 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.83□□□□□ -1.64
SYNPOQ8N3V7 MIR3160-1-201ENST00000577972 85 ntBASIC4.83□□□□□ -1.64
SYNPOQ8N3V7 FAM60BP-201ENST00000578364 658 ntBASIC4.83□□□□□ -1.64
SYNPOQ8N3V7 AL121992.2-201ENST00000606262 256 ntBASIC4.83□□□□□ -1.64
SYNPOQ8N3V7 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.83□□□□□ -1.64
SYNPOQ8N3V7 AC015914.2-201ENST00000618167 288 ntBASIC4.83□□□□□ -1.64
SYNPOQ8N3V7 AC022106.2-201ENST00000620114 757 ntBASIC4.83□□□□□ -1.64
SYNPOQ8N3V7 AC011944.2-201ENST00000624440 683 ntBASIC4.83□□□□□ -1.64
SYNPOQ8N3V7 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.83□□□□□ -1.64
SYNPOQ8N3V7 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.83□□□□□ -1.64
SYNPOQ8N3V7 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
SYNPOQ8N3V7 ZNF137P-201ENST00000456718 1920 ntBASIC4.83□□□□□ -1.64
SYNPOQ8N3V7 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.83□□□□□ -1.64
SYNPOQ8N3V7 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SYNPOQ8N3V7 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SYNPOQ8N3V7 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.83□□□□□ -1.64
SYNPOQ8N3V7 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.83□□□□□ -1.64
SYNPOQ8N3V7 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.83□□□□□ -1.64
SYNPOQ8N3V7 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SYNPOQ8N3V7 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SYNPOQ8N3V7 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
SYNPOQ8N3V7 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SYNPOQ8N3V7 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SYNPOQ8N3V7 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SYNPOQ8N3V7 GABPAP-201ENST00000419271 1356 ntBASIC4.82□□□□□ -1.64
SYNPOQ8N3V7 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SYNPOQ8N3V7 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SYNPOQ8N3V7 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SYNPOQ8N3V7 RNU6-173P-201ENST00000364215 104 ntBASIC4.82□□□□□ -1.64
SYNPOQ8N3V7 SNORA71.2-201ENST00000364941 134 ntBASIC4.82□□□□□ -1.64
SYNPOQ8N3V7 RNU6-1181P-201ENST00000384191 106 ntBASIC4.82□□□□□ -1.64
SYNPOQ8N3V7 MIR558-201ENST00000384920 94 ntBASIC4.82□□□□□ -1.64
SYNPOQ8N3V7 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.82□□□□□ -1.64
SYNPOQ8N3V7 Z98745.1-201ENST00000402553 494 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms