Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 MTCO3P15-201ENST00000526563 574 ntBASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 AC012182.1-201ENST00000570133 895 ntBASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 AC011492.1-201ENST00000600023 315 ntBASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 AL022067.1-201ENST00000602426 454 ntBASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 AC092954.1-201ENST00000609121 445 ntBASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 VN1R7P-201ENST00000619242 903 ntBASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 AC092608.3-201ENST00000625017 386 ntBASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 AP003485.1-201ENST00000625093 753 ntBASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.52□□□□□ -2.01
COL27A1Q8IZC6 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
COL27A1Q8IZC6 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
COL27A1Q8IZC6 AC025263.3-201ENST00000622965 1396 ntBASIC2.51□□□□□ -2.01
COL27A1Q8IZC6 RNU6-805P-201ENST00000365643 106 ntBASIC2.51□□□□□ -2.01
COL27A1Q8IZC6 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.51□□□□□ -2.01
COL27A1Q8IZC6 SNORD116-12-201ENST00000384468 92 ntBASIC2.51□□□□□ -2.01
COL27A1Q8IZC6 RNU6-1176P-201ENST00000390955 107 ntBASIC2.51□□□□□ -2.01
COL27A1Q8IZC6 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.51□□□□□ -2.01
COL27A1Q8IZC6 EIF5P1-201ENST00000400019 1231 ntBASIC2.51□□□□□ -2.01
COL27A1Q8IZC6 MTCO2P31-201ENST00000402702 684 ntBASIC2.51□□□□□ -2.01
COL27A1Q8IZC6 BTBD10P2-201ENST00000404779 676 ntBASIC2.51□□□□□ -2.01
COL27A1Q8IZC6 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.51□□□□□ -2.01
COL27A1Q8IZC6 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
COL27A1Q8IZC6 FO393414.1-201ENST00000428697 1184 ntBASIC2.51□□□□□ -2.01
COL27A1Q8IZC6 AL450263.2-201ENST00000439400 589 ntBASIC2.51□□□□□ -2.01
COL27A1Q8IZC6 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.51□□□□□ -2.01
COL27A1Q8IZC6 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
COL27A1Q8IZC6 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.51□□□□□ -2.01
COL27A1Q8IZC6 SNORD108-201ENST00000459332 71 ntBASIC2.51□□□□□ -2.01
COL27A1Q8IZC6 AC104164.3-201ENST00000467363 1258 ntBASIC2.51□□□□□ -2.01
COL27A1Q8IZC6 RNF138P1-201ENST00000502765 546 ntBASIC2.51□□□□□ -2.01
COL27A1Q8IZC6 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.51□□□□□ -2.01
COL27A1Q8IZC6 SUMO2P5-201ENST00000506790 245 ntBASIC2.51□□□□□ -2.01
COL27A1Q8IZC6 RN7SKP60-201ENST00000516985 239 ntBASIC2.51□□□□□ -2.01
COL27A1Q8IZC6 AC245166.1-201ENST00000521012 253 ntBASIC2.51□□□□□ -2.01
COL27A1Q8IZC6 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.51□□□□□ -2.01
COL27A1Q8IZC6 AC021451.1-201ENST00000523498 1129 ntBASIC2.51□□□□□ -2.01
COL27A1Q8IZC6 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC2.51□□□□□ -2.01
COL27A1Q8IZC6 GAS5-AS1-201ENST00000602767 694 ntBASIC2.51□□□□□ -2.01
COL27A1Q8IZC6 AC099785.1-201ENST00000605697 437 ntBASIC2.51□□□□□ -2.01
COL27A1Q8IZC6 AC112503.1-201ENST00000608436 391 ntBASIC2.51□□□□□ -2.01
COL27A1Q8IZC6 AC090115.4-201ENST00000609970 188 ntBASIC2.51□□□□□ -2.01
COL27A1Q8IZC6 AC104763.3-201ENST00000613765 618 ntBASIC2.51□□□□□ -2.01
COL27A1Q8IZC6 AC018926.3-201ENST00000618841 406 ntBASIC2.51□□□□□ -2.01
COL27A1Q8IZC6 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
COL27A1Q8IZC6 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.51□□□□□ -2.01
COL27A1Q8IZC6 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
COL27A1Q8IZC6 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
COL27A1Q8IZC6 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 SNORD62.1-201ENST00000362541 86 ntBASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 SNORA51.6-201ENST00000384151 125 ntBASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 RN7SKP192-201ENST00000411291 327 ntBASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 RNA5SP107-201ENST00000411358 122 ntBASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 OR51A3P-201ENST00000413596 924 ntBASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 HMGB3P23-201ENST00000414981 585 ntBASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 TOMM20P4-201ENST00000427861 435 ntBASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 snoU13.15-201ENST00000459407 104 ntBASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 HMGB1P25-201ENST00000468402 607 ntBASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 AC104982.1-201ENST00000478775 574 ntBASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 RPL21P103-201ENST00000479921 488 ntBASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 AC118942.1-201ENST00000529674 1035 ntBASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 AC090772.4-201ENST00000623599 362 ntBASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 AC079228.1-201ENST00000624774 1049 ntBASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 MTND4P9-201ENST00000507819 1346 ntBASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 OR56A5-201ENST00000340110 738 ntBASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 RNU6-984P-201ENST00000363236 109 ntBASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 RNU5E-10P-201ENST00000363506 118 ntBASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 RNU6-560P-201ENST00000364007 108 ntBASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 SNORA70E-201ENST00000384492 135 ntBASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 PRRC2CP1-201ENST00000404428 159 ntBASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 AC233981.1-201ENST00000423224 461 ntBASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 RPS6P12-201ENST00000432491 726 ntBASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 FCF1P1-201ENST00000432690 571 ntBASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC2.5□□□□□ -2.01
COL27A1Q8IZC6 AC010881.1-201ENST00000433830 235 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms