Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.74□□□□□ -1.65
TRIM48Q8IWZ4 AC133555.2-201ENST00000550213 292 ntBASIC4.74□□□□□ -1.65
TRIM48Q8IWZ4 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.74□□□□□ -1.65
TRIM48Q8IWZ4 AC233702.9-201ENST00000581528 203 ntBASIC4.74□□□□□ -1.65
TRIM48Q8IWZ4 AC021646.1-201ENST00000605469 484 ntBASIC4.74□□□□□ -1.65
TRIM48Q8IWZ4 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.74□□□□□ -1.65
TRIM48Q8IWZ4 FAM27B-201ENST00000610601 213 ntBASIC4.74□□□□□ -1.65
TRIM48Q8IWZ4 AL365204.3-201ENST00000612448 685 ntBASIC4.74□□□□□ -1.65
TRIM48Q8IWZ4 AL138713.1-201ENST00000624026 2130 ntBASIC4.74□□□□□ -1.65
TRIM48Q8IWZ4 AC073869.10-201ENST00000642016 354 ntBASIC4.74□□□□□ -1.65
TRIM48Q8IWZ4 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM48Q8IWZ4 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.74□□□□□ -1.65
TRIM48Q8IWZ4 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM48Q8IWZ4 AC008758.3-201ENST00000507003 1829 ntBASIC4.74□□□□□ -1.65
TRIM48Q8IWZ4 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
TRIM48Q8IWZ4 AC009229.4-201ENST00000623854 1947 ntBASIC4.74□□□□□ -1.65
TRIM48Q8IWZ4 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.74□□□□□ -1.65
TRIM48Q8IWZ4 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 AC011978.2-201ENST00000569835 2054 ntBASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 Y_RNA.132-201ENST00000363421 102 ntBASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 MIR558-201ENST00000384920 94 ntBASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 MIR298-201ENST00000401212 88 ntBASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 HMGN1P24-201ENST00000412282 298 ntBASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 AL645937.1-202ENST00000421799 937 ntBASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 HMGB1P18-201ENST00000438801 619 ntBASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 HMGB3P9-201ENST00000441799 583 ntBASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 AC000111.2-201ENST00000448200 210 ntBASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 SNORD121B-201ENST00000458838 81 ntBASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 RNU6-329P-201ENST00000459618 107 ntBASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 AC007547.1-201ENST00000462177 490 ntBASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 RPS29P22-201ENST00000472363 168 ntBASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 AC087385.1-201ENST00000475062 312 ntBASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 AC005798.1-201ENST00000513715 387 ntBASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 AC105417.1-201ENST00000514691 285 ntBASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 SNORA19.2-201ENST00000516013 114 ntBASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 RN7SKP276-201ENST00000516242 268 ntBASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 AC105031.1-201ENST00000518550 476 ntBASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 IGKV2D-36-201ENST00000518643 226 ntBASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 AC011979.2-201ENST00000527568 352 ntBASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 PSMA3P-201ENST00000555485 635 ntBASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 AL049839.1-201ENST00000556151 657 ntBASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 AC011477.5-201ENST00000586571 259 ntBASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 AC010591.1-201ENST00000603941 649 ntBASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 AL451044.1-201ENST00000604867 238 ntBASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 AL391358.1-201ENST00000605342 190 ntBASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 RNU6-89P-201ENST00000606519 100 ntBASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 AC104237.2-201ENST00000612456 443 ntBASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 AC068831.8-201ENST00000620171 435 ntBASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 AC012618.3-205ENST00000637896 1496 ntBASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 AP005432.1-201ENST00000580891 3485 ntBASIC4.73□□□□□ -1.65
TRIM48Q8IWZ4 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM48Q8IWZ4 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM48Q8IWZ4 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM48Q8IWZ4 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM48Q8IWZ4 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
TRIM48Q8IWZ4 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM48Q8IWZ4 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM48Q8IWZ4 Y_RNA.231-201ENST00000364358 102 ntBASIC4.72□□□□□ -1.65
TRIM48Q8IWZ4 RNU4-66P-201ENST00000365199 138 ntBASIC4.72□□□□□ -1.65
TRIM48Q8IWZ4 Y_RNA.373-201ENST00000365600 103 ntBASIC4.72□□□□□ -1.65
TRIM48Q8IWZ4 RNU6-641P-201ENST00000384006 107 ntBASIC4.72□□□□□ -1.65
TRIM48Q8IWZ4 RNU6-831P-201ENST00000384548 107 ntBASIC4.72□□□□□ -1.65
TRIM48Q8IWZ4 MIR454-201ENST00000390180 115 ntBASIC4.72□□□□□ -1.65
TRIM48Q8IWZ4 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
TRIM48Q8IWZ4 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM48Q8IWZ4 NRBF2P3-201ENST00000432731 865 ntBASIC4.72□□□□□ -1.65
TRIM48Q8IWZ4 ERLEC1P1-201ENST00000433806 578 ntBASIC4.72□□□□□ -1.65
TRIM48Q8IWZ4 MTND1P18-201ENST00000448191 573 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms