Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 AC109445.1-201ENST00000512356 383 ntBASIC3.62□□□□□ -1.83
CCDC60Q8IWA6 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.62□□□□□ -1.83
CCDC60Q8IWA6 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.62□□□□□ -1.83
CCDC60Q8IWA6 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC60Q8IWA6 TGIF1P1-201ENST00000558095 802 ntBASIC3.62□□□□□ -1.83
CCDC60Q8IWA6 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC60Q8IWA6 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC60Q8IWA6 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC60Q8IWA6 AC097478.2-201ENST00000610572 514 ntBASIC3.62□□□□□ -1.83
CCDC60Q8IWA6 AC100793.4-201ENST00000613683 429 ntBASIC3.62□□□□□ -1.83
CCDC60Q8IWA6 AC090116.1-201ENST00000615679 446 ntBASIC3.62□□□□□ -1.83
CCDC60Q8IWA6 U73479.1-201ENST00000618062 168 ntBASIC3.62□□□□□ -1.83
CCDC60Q8IWA6 AL359893.1-201ENST00000447628 1580 ntBASIC3.62□□□□□ -1.83
CCDC60Q8IWA6 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
CCDC60Q8IWA6 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.62□□□□□ -1.83
CCDC60Q8IWA6 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC60Q8IWA6 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC60Q8IWA6 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC60Q8IWA6 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC60Q8IWA6 USP8P1-201ENST00000494673 3183 ntBASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 PABPC1P7-201ENST00000413177 1513 ntBASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 RIOK3P1-201ENST00000418778 1528 ntBASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 RNU6-216P-201ENST00000363282 104 ntBASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 SNORA51.6-201ENST00000384151 125 ntBASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 RNU6-83P-201ENST00000384568 112 ntBASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 MIR128-1-201ENST00000384921 82 ntBASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 MT-TC-201ENST00000387405 66 ntBASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 AC016769.3-201ENST00000396562 315 ntBASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 EIF5P1-201ENST00000400019 1231 ntBASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 HSPE1P26-201ENST00000405341 275 ntBASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 AL450338.1-201ENST00000407987 512 ntBASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 MIR1250-201ENST00000408098 113 ntBASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 AL353678.1-201ENST00000422735 741 ntBASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 AL139421.1-201ENST00000423010 169 ntBASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 AL671855.1-201ENST00000446875 1203 ntBASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 MRPS31P2-201ENST00000451581 518 ntBASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 RNU7-170P-201ENST00000459303 61 ntBASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 RN7SL863P-201ENST00000462370 296 ntBASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 RPL23AP14-201ENST00000468281 468 ntBASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 KLRA1P-201ENST00000503499 986 ntBASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 HMGB1P28-201ENST00000507778 552 ntBASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 AC079395.1-201ENST00000510981 262 ntBASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 ARL2BPP6-201ENST00000512757 439 ntBASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 RNY4P37-201ENST00000516225 96 ntBASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 SLC2A13P1-201ENST00000531560 322 ntBASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 AC125611.1-201ENST00000549563 229 ntBASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 NBEAP1-201ENST00000554452 979 ntBASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 HIGD1AP17-201ENST00000554576 276 ntBASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 AC009097.3-201ENST00000563557 1018 ntBASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 AC090616.5-202ENST00000582111 297 ntBASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 AL365503.1-201ENST00000605247 905 ntBASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 AC124312.4-201ENST00000605533 310 ntBASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 AC140725.3-201ENST00000616193 880 ntBASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 AC009159.2-201ENST00000617603 606 ntBASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 AC006927.4-201ENST00000639187 543 ntBASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC60Q8IWA6 ZNF734P-201ENST00000419494 1534 ntBASIC3.6□□□□□ -1.83
CCDC60Q8IWA6 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC60Q8IWA6 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CCDC60Q8IWA6 RPS24P7-201ENST00000416921 246 ntBASIC3.6□□□□□ -1.83
CCDC60Q8IWA6 RPL21P112-201ENST00000434403 463 ntBASIC3.6□□□□□ -1.83
CCDC60Q8IWA6 MTCO2P20-201ENST00000437339 673 ntBASIC3.6□□□□□ -1.83
CCDC60Q8IWA6 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC60Q8IWA6 AC092427.1-201ENST00000439177 601 ntBASIC3.6□□□□□ -1.83
CCDC60Q8IWA6 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.6□□□□□ -1.83
CCDC60Q8IWA6 MTND3P1-201ENST00000441336 220 ntBASIC3.6□□□□□ -1.83
CCDC60Q8IWA6 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC60Q8IWA6 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC60Q8IWA6 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms