Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
FOXR1Q6PIV2 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.81□□□□□ -1.48
FOXR1Q6PIV2 AL122020.1-201ENST00000472287 459 ntBASIC5.81□□□□□ -1.48
FOXR1Q6PIV2 AC087879.1-201ENST00000474343 374 ntBASIC5.81□□□□□ -1.48
FOXR1Q6PIV2 TRBVB-201ENST00000477100 408 ntBASIC5.81□□□□□ -1.48
FOXR1Q6PIV2 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC5.81□□□□□ -1.48
FOXR1Q6PIV2 AC021382.1-201ENST00000483523 359 ntBASIC5.81□□□□□ -1.48
FOXR1Q6PIV2 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.81□□□□□ -1.48
FOXR1Q6PIV2 RNU2-10P-201ENST00000516375 211 ntBASIC5.81□□□□□ -1.48
FOXR1Q6PIV2 CYCSP22-201ENST00000517555 339 ntBASIC5.81□□□□□ -1.48
FOXR1Q6PIV2 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.81□□□□□ -1.48
FOXR1Q6PIV2 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC5.81□□□□□ -1.48
FOXR1Q6PIV2 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC5.81□□□□□ -1.48
FOXR1Q6PIV2 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.81□□□□□ -1.48
FOXR1Q6PIV2 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.81□□□□□ -1.48
FOXR1Q6PIV2 AC091516.1-201ENST00000549191 703 ntBASIC5.81□□□□□ -1.48
FOXR1Q6PIV2 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.81□□□□□ -1.48
FOXR1Q6PIV2 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.81□□□□□ -1.48
FOXR1Q6PIV2 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
FOXR1Q6PIV2 MIR6809-201ENST00000612189 116 ntBASIC5.81□□□□□ -1.48
FOXR1Q6PIV2 AL445363.3-201ENST00000623080 671 ntBASIC5.81□□□□□ -1.48
FOXR1Q6PIV2 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.81□□□□□ -1.48
FOXR1Q6PIV2 U6.104-201ENST00000637979 90 ntBASIC5.81□□□□□ -1.48
FOXR1Q6PIV2 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
FOXR1Q6PIV2 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
FOXR1Q6PIV2 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.81□□□□□ -1.48
FOXR1Q6PIV2 AC245100.2-201ENST00000454544 1679 ntBASIC5.81□□□□□ -1.48
FOXR1Q6PIV2 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.81□□□□□ -1.48
FOXR1Q6PIV2 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.81□□□□□ -1.48
FOXR1Q6PIV2 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
FOXR1Q6PIV2 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
FOXR1Q6PIV2 BDP1P-201ENST00000582658 1990 ntBASIC5.8□□□□□ -1.48
FOXR1Q6PIV2 AC009313.2-201ENST00000417893 1941 ntBASIC5.8□□□□□ -1.48
FOXR1Q6PIV2 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
FOXR1Q6PIV2 SNORD62.1-201ENST00000362541 86 ntBASIC5.8□□□□□ -1.48
FOXR1Q6PIV2 SNORA41-201ENST00000384675 132 ntBASIC5.8□□□□□ -1.48
FOXR1Q6PIV2 AL391361.1-201ENST00000405580 489 ntBASIC5.8□□□□□ -1.48
FOXR1Q6PIV2 AL023807.1-201ENST00000407932 359 ntBASIC5.8□□□□□ -1.48
FOXR1Q6PIV2 RNA5SP36-201ENST00000410197 133 ntBASIC5.8□□□□□ -1.48
FOXR1Q6PIV2 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.8□□□□□ -1.48
FOXR1Q6PIV2 AL451074.5-201ENST00000415894 435 ntBASIC5.8□□□□□ -1.48
FOXR1Q6PIV2 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC5.8□□□□□ -1.48
FOXR1Q6PIV2 RPS12P17-201ENST00000438591 377 ntBASIC5.8□□□□□ -1.48
FOXR1Q6PIV2 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.8□□□□□ -1.48
FOXR1Q6PIV2 AP000281.1-201ENST00000444036 316 ntBASIC5.8□□□□□ -1.48
FOXR1Q6PIV2 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
FOXR1Q6PIV2 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.8□□□□□ -1.48
FOXR1Q6PIV2 AC243772.1-201ENST00000451620 410 ntBASIC5.8□□□□□ -1.48
FOXR1Q6PIV2 OR2AQ1P-201ENST00000451972 200 ntBASIC5.8□□□□□ -1.48
FOXR1Q6PIV2 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.8□□□□□ -1.48
FOXR1Q6PIV2 AC011005.2-201ENST00000487324 359 ntBASIC5.8□□□□□ -1.48
FOXR1Q6PIV2 RBBP4P6-201ENST00000508098 202 ntBASIC5.8□□□□□ -1.48
FOXR1Q6PIV2 RNU5B-3P-201ENST00000516601 115 ntBASIC5.8□□□□□ -1.48
FOXR1Q6PIV2 SNORA70.20-201ENST00000516848 126 ntBASIC5.8□□□□□ -1.48
FOXR1Q6PIV2 RNU6-897P-201ENST00000517135 105 ntBASIC5.8□□□□□ -1.48
FOXR1Q6PIV2 IGLV3-24-201ENST00000517477 197 ntBASIC5.8□□□□□ -1.48
FOXR1Q6PIV2 SOD1P3-201ENST00000518682 454 ntBASIC5.8□□□□□ -1.48
FOXR1Q6PIV2 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
FOXR1Q6PIV2 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.8□□□□□ -1.48
FOXR1Q6PIV2 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.8□□□□□ -1.48
FOXR1Q6PIV2 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC5.8□□□□□ -1.48
FOXR1Q6PIV2 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.8□□□□□ -1.48
FOXR1Q6PIV2 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.8□□□□□ -1.48
FOXR1Q6PIV2 MIR4472-2-201ENST00000582069 67 ntBASIC5.8□□□□□ -1.48
FOXR1Q6PIV2 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
FOXR1Q6PIV2 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
FOXR1Q6PIV2 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
FOXR1Q6PIV2 RNA5SP440-201ENST00000612665 119 ntBASIC5.8□□□□□ -1.48
FOXR1Q6PIV2 AL161423.1-201ENST00000613700 262 ntBASIC5.8□□□□□ -1.48
FOXR1Q6PIV2 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC5.8□□□□□ -1.48
FOXR1Q6PIV2 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.8□□□□□ -1.48
FOXR1Q6PIV2 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
FOXR1Q6PIV2 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
FOXR1Q6PIV2 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
FOXR1Q6PIV2 MAPK10-349ENST00000641767 3661 ntBASIC5.8□□□□□ -1.48
FOXR1Q6PIV2 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
FOXR1Q6PIV2 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
FOXR1Q6PIV2 AL138713.1-201ENST00000624026 2130 ntBASIC5.8□□□□□ -1.48
FOXR1Q6PIV2 AC027088.4-201ENST00000611559 1947 ntBASIC5.8□□□□□ -1.48
FOXR1Q6PIV2 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
FOXR1Q6PIV2 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
FOXR1Q6PIV2 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
FOXR1Q6PIV2 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
FOXR1Q6PIV2 MIR375-201ENST00000362103 64 ntBASIC5.79□□□□□ -1.48
FOXR1Q6PIV2 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.79□□□□□ -1.48
FOXR1Q6PIV2 AP000580.1-201ENST00000404439 358 ntBASIC5.79□□□□□ -1.48
FOXR1Q6PIV2 OR3A2-201ENST00000408891 1076 ntBASIC5.79□□□□□ -1.48
FOXR1Q6PIV2 RNU6-1140P-201ENST00000410517 106 ntBASIC5.79□□□□□ -1.48
FOXR1Q6PIV2 RPL21P38-201ENST00000418090 167 ntBASIC5.79□□□□□ -1.48
FOXR1Q6PIV2 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
FOXR1Q6PIV2 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC5.79□□□□□ -1.48
FOXR1Q6PIV2 NOTCH2P1-201ENST00000443481 624 ntBASIC5.79□□□□□ -1.48
FOXR1Q6PIV2 AC108059.3-201ENST00000456388 214 ntBASIC5.79□□□□□ -1.48
FOXR1Q6PIV2 AC087884.1-201ENST00000469738 328 ntBASIC5.79□□□□□ -1.48
FOXR1Q6PIV2 RPS17P5-201ENST00000498293 408 ntBASIC5.79□□□□□ -1.48
FOXR1Q6PIV2 PGAM1P13-201ENST00000507497 754 ntBASIC5.79□□□□□ -1.48
FOXR1Q6PIV2 AP003733.2-201ENST00000529409 171 ntBASIC5.79□□□□□ -1.48
FOXR1Q6PIV2 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.79□□□□□ -1.48
FOXR1Q6PIV2 SUB1P3-201ENST00000564581 315 ntBASIC5.79□□□□□ -1.48
FOXR1Q6PIV2 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms